Talaromyces rugulosus: TRUGW13939_01685
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Entry
TRUGW13939_01685 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K10841
DNA excision repair protein ERCC-6
Organism
trg
Talaromyces rugulosus
Pathway
trg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TRUGW13939_01685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trg03036
]
TRUGW13939_01685
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_01685
Chromosome and associated proteins [BR:
trg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
TRUGW13939_01685
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
TRUGW13939_01685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
WHD_Rad26_CSB
WHD_SOWAH
TFIIF_beta
Motif
Other DBs
NCBI-GeneID:
55989195
NCBI-ProteinID:
XP_035340776
UniProt:
A0A7H8QKZ0
LinkDB
All DBs
Position
I:complement(join(4937427..4940673,4940725..4940798,4940852..4940947))
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AA seq
1138 aa
AA seq
DB search
MESTPVDESAKLRELDANVRDQDDLERELGLQADRLLMEQADERDQKRIERTTKEKLKIE
DQILKLYQRLEQPAGPAQRVRTESEITKAQDRLATLDSDLKEIQERIDGRHVDQDVVPET
ETGRLPNESRRDYLIRTGKITPFSKMGSGPRQGTLESLQDALIDAEDERDEAEALRDASK
RDAVSHRNLRLPGLGLGDERESSEDFPESDRSQKRRKITPGVSRKAAKTSRQVDTGDDDS
YVESEASELSSTDEFDPTPGETLGKRKSRRVDNEDVEDLTGLDDGNEEFYQERLRRWIRR
RAAARKRTAEGGEIIKEEEEDAGVGQQTQEWLLPHPTVPDAEYDGGYRVPGDIFPILFDY
QKTGVQWLWELYQQQVGGIIGDEMGLGKTIQIISFLAGLHHSGKLQRPVIVVAPATVMKQ
WVTEFHRWWPPFRVSILHTSGSGMINVRNESTRENALSNEIWDPSRPHAMTKSQKMAKKI
VQRVVEEGHVLVTTYSGLQTYAPVLIPVDWDCAVLDEGHKIRNPNTSITIHCKELRTPHR
LILSGTPMQNNLSELWSLFDFVFPMRLGTLVDFRNQFEFPIRQGGYANASNLQVQTAARC
AETLKEAISPYLLQRFKVDVAADLPKKSEQVLFCKLSPLQRKAYAQFLNSQECNSILAGR
RQVLYGVDMLRKICNHPDLVTHKLFSSRPDYGDAAKSGKMQVVKALLELWKDTGHKTLLF
AQHRIMLNILEKFVKALPGFNYRRMDGETPIHRRQSLVDEFNNSPDIHVFLLTTKVGGLG
VNLTGADRVLIYDPDWNPSTDMQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQ
FLTNKVLKDPKQRQTFEMSSLHDLFSLGEEDQAETSSLFKTEVTYQANAKEKSKAGRQNE
KQDVQNVEGIAGVEEFHDAAGNKGENGEEKTNEQGGSSSDSRLMEAIFAQSGVHSALEHD
RIVNGKKIIAPDRGIIEAEAKRLAAEAAEKLRKAEEKARLVPVGTPTWTGQFGIAGRPED
TGTSHFGGAASMARGVGVGPSSASILANLANRTGRNSPASSSGGGGGKVEFLPMIRDYIL
AQGGSAYTQMLIDHFNRFCTTAQRSAEFKETLKTVAVLNKGGRNGRGKWSLKKEYARR
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgacaccggtagatgaatctgcaaagctccgtgagctcgacgccaacgtccgg
gaccaggatgatctcgaaagagaacttggtcttcaggccgaccggctgcttatggaacaa
gcggatgagagggatcagaaaagaatcgaacggacgaccaaagagaagctaaaaatcgag
gaccagatcttgaagctataccaacgtctagagcaacccgcgggaccagcgcagagggta
cgcaccgaatccgagatcacaaaagcccaggatagattggccactctagattcggacttg
aaagaaatacaagagcgcatcgacggccgacacgtggatcaagatgttgtgccggagaca
gaaacgggcagactgccaaatgaatcacgtcgtgattatcttattcgcacggggaaaatc
accccattttcgaaaatgggcagcggtccgaggcaaggtacactggaaagcttacaggat
gcattgattgatgccgaggatgaacgcgacgaggcagaagctttacgtgatgcgtccaag
agagatgccgtgtctcatcgtaatttacgccttcccgggcttggtctcggtgacgagaga
gaaagctcagaggactttccagaatcagatcggtcacaaaaacggagaaaaattactccc
ggtgtttcacgaaaagctgccaagacctctcgacaggtagacaccggggatgatgattcc
tacgtggagagcgaagcgagtgagctctcttctacggatgagtttgaccctactccggga
gaaacgttggggaaacggaaatcacggagagtcgataatgaggatgtggaggacctgaca
ggtctagacgatggcaacgaggaattttatcaagaaagactgcgccgctggatccgtcgc
cgagctgcggctcgtaagcgaacggcggagggcggagaaattatcaaggaggaagaggag
gatgcaggtgtaggccagcagactcaggaatggctcctcccacatccaactgttcccgat
gctgaatacgatgggggatatcgcgtacctggtgatatatttccaatcctctttgattac
caaaagaccggcgtgcagtggctctgggaactgtaccaacagcaagtgggaggcattatt
ggggatgaaatgggcctcggcaagacgatccagatcatttcattcctagcaggtcttcat
cacagcgggaaactacagaggccggtgattgtcgtggctccggccactgtcatgaaacag
tgggtgaccgagtttcatcgatggtggccgccgttcagagtatccatcttgcatacgtct
gggagcggcatgatcaatgtccggaacgaaagtacccgcgaaaatgccttgagcaatgag
atatgggaccccagccggcctcatgcaatgaccaagtcccagaaaatggccaagaagatt
gtgcaacgggtggttgaggaagggcatgttctggtcaccacgtattcaggtctccagacg
tatgcgcccgttctcatccccgttgactgggattgtgctgttctcgatgaaggccacaag
atccgcaatccaaatacctcaattactattcattgtaaagagctgcgtactccgcaccgg
ttgattctgtctggcacgccaatgcaaaacaacttgtctgagctgtggtccctttttgat
tttgtcttcccaatgcgtttgggcactctggtcgactttcgcaatcaattcgaattccct
attcgccagggaggctacgcaaatgcaagtaacttgcaagtacagaccgcagcgcggtgt
gcagaaactctgaaggaggctatcagcccctatctattacaacggtttaaagtggacgtg
gctgccgatctacccaagaagagcgagcaggttctcttctgcaaactgtcaccacttcaa
cgcaaggcttacgcgcaattcttgaattcgcaagagtgcaactccattctggctgggcgc
aggcaggttttgtatggggttgatatgttacgcaagatctgcaaccatccggatcttgta
acccacaagctcttctcctcgcgaccggactatggcgatgctgccaaatccggcaagatg
caggtggtgaaggcgcttctggaattatggaaggatactggccacaagacgttgttgttt
gcgcagcatcgcatcatgctaaacattcttgagaagtttgtcaaggcgctcccaggtttt
aactaccgccggatggacggtgagactccgatccatcgccggcagagccttgtggacgag
ttcaacaatagcccggacatccatgtcttcttactcacaaccaaggtcggaggactcgga
gttaacctcacgggagctgaccgtgttctcatctacgatcctgactggaatccatcaaca
gacatgcaagctcgagagagagcatggagacttggacaaaagagagaagtaaccatttac
cggttgatgacggcgggcaccattgaagagaagatttaccatcgccagattttcaagcag
ttcctaacgaacaaagtgctgaaagacccgaagcagcggcagacgtttgagatgagcagc
ctgcacgatctattctcactgggggaagaagaccaggcagaaactagcagccttttcaaa
acagaagttacgtaccaggcaaatgccaaggagaaatccaaggctggtcgacaaaatgag
aagcaagatgtccagaatgtcgaggggatcgcgggagtggaagaattccacgacgcagca
gggaataaaggagaaaacggcgaagaaaaaacgaacgaacaaggaggctcgagcagcgac
tctcggctgatggaagccatctttgcgcaatctggagtccactctgctctcgagcacgac
cggatcgtcaatggaaagaagattatcgctccggacaggggaattattgaagcagaggct
aaacggctggctgcagaagctgccgagaagctccgcaaagccgaggaaaaagcacggtta
gtgccagtaggcacaccgacatggactgggcagtttggcatcgccggcagaccggaagac
acaggcacctctcattttggaggagcagcgagcatggcacggggagttggtgttggacct
tcttctgccagcatcctggccaacctggccaaccgaacgggacgtaacagcccagcttcc
tcttccggaggaggaggagggaaagtagagttcttgccgatgatccgagattacatactc
gcgcaggggggctcggcgtacacgcaaatgctgatcgatcactttaaccggttctgcacg
acggcacagcgatcggctgaattcaaggagacgctcaagacggtggcggtgctgaacaag
ggcgggcgcaatggacggggcaagtggtccttgaaaaaggagtacgctagacgatga
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