Talaromyces rugulosus: TRUGW13939_02017
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Entry
TRUGW13939_02017 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K14309
nuclear pore complex protein Nup93
Organism
trg
Talaromyces rugulosus
Pathway
trg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRUGW13939_02017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_02017
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRUGW13939_02017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
55989527
NCBI-ProteinID:
XP_035341106
UniProt:
A0A7H8QLW2
LinkDB
All DBs
Position
I:complement(join(5896136..5896462,5896524..5897254,5897313..5898294,5898348..5898966,5899045..5899466))
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AA seq
1026 aa
AA seq
DB search
MANAFGSSLFGASATGPSTAPQQQQQQPTSIFSSANPAPSSGFSLLGRQTQQQAPQAGAS
QAQQQPSAQLAQSSQNTQPAYFNSLLERGKKRSFASSATPDTGFAELPSLQLGLDDIRRK
ARELGTPDAKKSQHGPRDQKAHYLLAASGISPGHALRDLRALDSQTATSASLKQMDSFDP
DNEKFMRGIQQRGRQAMVAESLARVHHDFDAFLEEKVNMNWDDQRHRIFQHFGLSSKDGD
FDNRGSFGRTTQVRPSGPSGTRSVFGRSALEKSVIGLPGNPIASSQLFADPNERGDTVSQ
SPDNRFLREKMGIFGEKVRRLNEARMEDRPYSILHEFGEVEDHAGGDVPRQLTEAYHALI
SITGEARNVSSFADAGALKERRFANDYLNETSTSKDAITLRKKVIEGSRGFLERAFYSEV
EAAIAKNPREAQIGGIPSTINRIRAYIRLRATRKDLAPDGTELQIVGDDYCWILIFFLLR
SGFVTEAAEYVSSDPGFRSLDHKFVTYMTTYAQNRRLPRDLQQKINGEYQQRLRNAPENT
VDPYRMACYKIIGRCDLSRRRLDGVGQGVEDWMWLQFTLAREDDRVEEIAGDFFGLEDIQ
TDISEIGQRVFAKGSDSPGGYGTFFLLQILGGMFENAISYLGSHAPVSAVHFAIALDYYG
LLRVSDFYTAGEEILSFTTQQFPQINFAYLITQYTREFRTGNVDAAIDYFALICLNADLP
GSLGNSQASVCHEALREFILETRDFAKLLGDIRADGVRIKGAIERRLKLIKLIDQEEFLR
TITIQAAAVADDKGLVADAVLLYHLAEDYDHVIDIINRALSETVALDLGQSVSDFQPLKP
REVHGGDAAASAAPGSSLSLTTVDNPVILAKNMISLYNSNALYYQKIRQVNRDGCGILLQ
MMEAKVLVEAGSWAPALDAIHALQILPLRAKGSVPYIRNATQAFAGLPGVIARNIGHLII
WSITCIGRERERLNSGAYENAIRQTLAEDLLVMAKDLMLFSGMIRYKLQPRVYETLARAG
AEIGAF
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcgtttggaagctcgttgtttggagcaagtgccactggcccatcaacggcg
ccacagcagcagcaacaacaaccgacaagcatattctcgtctgcgaatcctgctccgtcc
tccggcttttctctactaggccgtcagactcaacagcaagctccgcaggctggtgcaagc
caggcgcaacagcaaccctcggcgcagcttgcgcagtcttcccagaacacccaacctgct
tatttcaacagcctactcgagaggggaaagaaacgatcctttgcttcttctgctacgccg
gataccgggtttgcagagctgcccagccttcaattagggcttgatgatattcgcaggaaa
gctagggagcttgggacacccgacgccaaaaaatcccaacatggaccccgggatcaaaaa
gcacattacctacttgcagcttcaggaatatcgcccggccacgctctacgtgacttgaga
gccctcgactcgcaaaccgctacttctgcatccctcaaacaaatggatagcttcgatccc
gataatgaaaaattcatgagaggtattcaacaacgtgggcgccaggctatggtcgccgag
agcctagcccgtgttcaccacgatttcgacgcatttctggaggagaaagttaatatgaac
tgggacgaccagcgccataggatttttcagcactttggcctgtcatctaaggatggcgac
tttgacaaccggggctcattcggccgtactacgcaagtaaggccctcgggaccgtcgggt
acacggagtgttttcggacgttctgctctggagaaatcagtcattgggctgcccggaaat
ccaattgcgagttcgcaactgtttgcggaccccaatgaaagaggcgacacagtgtcacag
agcccagacaaccgctttctacgggaaaagatgggcattttcggtgaaaaggtgcggcgt
ttgaacgaggccagaatggaggataggccttattcgatccttcacgaattcggagaagtt
gaagaccatgctggtggcgatgtaccccgtcaattgacagaagcttatcatgcattaata
tcaattactggagaagcgcgcaatgtatctagtttcgctgatgcgggggccttgaaggag
aggcgctttgccaacgattatctgaacgagacctccacttccaaggacgccataaccttg
agaaagaaggtcattgaagggtcaagaggtttcctggaacgagcattctactctgaagtt
gaggccgcaatagccaagaatccacgggaagcgcaaattggcggaattccgtcgaccatc
aacagaatccgggcttatattcgccttcgtgccacccgaaaagatcttgccccggacgga
acggagttgcagattgttggtgacgactattgttggatattgatctttttccttcttcgc
agtggatttgtgaccgaagctgccgaatatgtcagttctgatccgggtttcagatcgctc
gaccacaaattcgtgacctacatgacgacctatgctcagaataggagattaccccgagac
ctgcaacaaaagatcaacggagagtatcaacaacgcttgcgcaatgccccagagaacaca
gtcgacccataccgtatggcatgttacaagataatcggccgctgtgacctcagtcgcaga
agactagacggcgttggccagggtgtggaggattggatgtggttgcaattcacccttgcc
agagaagatgatcgtgttgaagaaattgctggagacttcttcggccttgaagatatccaa
accgatatttccgagattggccaacgagtctttgccaagggatcggatagtcccggtggc
tatggaacttttttcctcttgcagattttgggtgggatgtttgagaatgcaatttcatac
cttggatctcatgctccagttagcgccgtgcatttcgccattgccctggattattacggg
cttctgcgcgtttccgacttttacaccgcgggcgaagagattctgtcttttactactcaa
caattccctcaaataaatttcgcatacctgatcacacaatacactcgcgaattccgcaca
ggaaacgtcgatgccgctattgattattttgcactcatttgtctaaacgcagacctccct
ggatcccttggtaattcacaagcctctgtatgccacgaggcactgcgagaattcattctc
gagaccagagactttgcgaaactacttggtgacattcgcgccgatggcgtgagaatcaag
ggagccattgaacggcgcctgaaactcatcaagctcatcgaccaagaggaattcctcagg
accatcacaatccaggctgcagcagtggcggacgacaaaggattggtggccgatgcagtg
cttttataccatcttgccgaggactacgaccacgtcattgacatcatcaaccgtgctttg
tcagaaaccgttgcgctggacttgggccagtccgtatccgactttcaacctttgaagccc
agagaagtccatggaggagacgcggctgcttcagcagcacctggtagtagtctcagtctc
accactgtcgacaatccagtgattctagcgaagaacatgatcagtctgtacaacagcaat
gcactttactaccagaaaatccgccaagtcaaccgtgatggatgtggaattctgttacag
atgatggaagccaaggtcctcgtcgaagccgggagctgggcaccagcattagacgcaatc
cacgccctccaaatcctacccttacgtgccaagggttccgtgccatatatccgcaacgcc
acgcaagcctttgccggtttgcctggcgttatcgcgcgtaatattggccatttgatcatc
tggagcataacctgcatcggccgcgagcgcgagcgcctcaactcgggcgcgtacgagaac
gcgattcgtcagactttggcagaggatttgctggttatggctaaggatcttatgctgttt
tcgggtatgattaggtataagctgcagccgcgggtgtatgagactctggctcgtgcgggg
gctgagattggagcgttttga
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