Talaromyces rugulosus: TRUGW13939_02027
Help
Entry
TRUGW13939_02027 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
trg
Talaromyces rugulosus
Pathway
trg03013
Nucleocytoplasmic transport
trg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRUGW13939_02027
03015 mRNA surveillance pathway
TRUGW13939_02027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_02027
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TRUGW13939_02027
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_ACIN1
RRM_7
RRM_3
vWA_HGL2
Motif
Other DBs
NCBI-GeneID:
55989537
NCBI-ProteinID:
XP_035341116
UniProt:
A0A7H8QLX3
LinkDB
All DBs
Position
I:complement(join(5922181..5922579,5922644..5922774,5922830..5922935,5922998..5923348))
Genome browser
AA seq
328 aa
AA seq
DB search
MLNFPKPNTARNLHHIHVFSIFDLITAIALYSSSSMPDRSPLPAMSPRDSLRRSVSPRSP
RYPDSRSPSETRGRTRSRSFSRDQESPRSPKRAGGRWPRDRSYTRSPSPRSPRRSSKIVV
EKLTKNVTEGHLHDIFGSFGTIQNVDLPLNKTFMTNRGTAYILYQNVADAEAAVSNMHEA
QVDGAVLKVSIVLPRRADSTMTTRLVSLGAHHQEDDHRGDQQMAAGTTTDITRTAHNPCR
DRHPVGAQDTDPTLHALIPVPSRGEETPGEARGIADVGVRATAATVREMAVFLAKVVAQT
GAEVIDYPRGEDDFCLILSAMMPGGALV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctcaactttcccaaaccaaacactgctcgcaatctccatcacattcacgttttcagc
atcttcgacctaataactgccatcgctctatatagcagcagcagtatgccagataggtca
cccctacctgcaatgtcccctcgggactcgctgcgccgatccgtgtcgccgcgttctccc
agatatcccgacagtcgcagtccgagtgaaacgcgtggaaggacaagaagtcgatcattt
tcacgagaccaagaatcgccacgaagcccgaaacgcgctggcggccgatggccgcgagac
cgaagctacacgagaagcccaagcccaagaagtcctaggagaagctccaaaatcgtcgtg
gaaaaattgaccaaaaatgtcactgaaggtcatttgcacgacatttttggttcattcgga
acgatacagaatgtcgatcttcctctgaacaaaacatttatgacgaaccgaggcaccgca
tatatcttgtatcaaaatgtcgcagacgctgaggcggcggtatccaatatgcacgaagct
caagtcgacggggccgttttgaaagtgtctattgttctgcctcgacgtgcagacagtaca
atgaccacccgactggtttctctcggggctcaccaccaagaagacgatcaccgaggcgac
cagcaaatggcggcgggcacaacaacagacataacacgtaccgcccacaatccttgtcgc
gatcgccatcccgtcggcgctcaagacacagatcctactctccacgctctgattccggtt
ccgagccgaggagaagagactccaggagaagcccgaggtatcgccgacgtcggagtccga
gctacagcagctacagttcgagagatggcagtatttctggcaaaagtcgtagcccaaaca
ggagcagaggtcatagactacccccgaggcgaagatgatttttgcctcattctgtctgcg
atgatgccgggtggtgccttggtttaa
DBGET
integrated database retrieval system
