Talaromyces rugulosus: TRUGW13939_02617
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Entry
TRUGW13939_02617 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K10756
replication factor C subunit 3/5
Organism
trg
Talaromyces rugulosus
Pathway
trg03030
DNA replication
trg03410
Base excision repair
trg03420
Nucleotide excision repair
trg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRUGW13939_02617
03410 Base excision repair
TRUGW13939_02617
03420 Nucleotide excision repair
TRUGW13939_02617
03430 Mismatch repair
TRUGW13939_02617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trg03032
]
TRUGW13939_02617
03036 Chromosome and associated proteins [BR:
trg03036
]
TRUGW13939_02617
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_02617
DNA replication proteins [BR:
trg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TRUGW13939_02617
DNA Replication Termination Factors
ELG1-RFC complex
TRUGW13939_02617
Chromosome and associated proteins [BR:
trg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TRUGW13939_02617
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TRUGW13939_02617
Check point factors
HRAD17(Rad24)-RFC complex
TRUGW13939_02617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_22
AAA_assoc_2
AAA_16
RCF1-5-like_lid
AAA_30
AAA_11
AAA_19
AAA_14
AAA_24
RuvB_N
AAA_5
ResIII
DUF815
AAA_3
DEAD
AAA_28
PhoH
Sigma54_activat
AAA_18
SLFN-g3_helicase
Mg_chelatase
DNAX_ATPase_lid
AAA_25
nSTAND3
AAA_7
ATPase_2
TniB
bpMoxR
SRP54
RNA_helicase
ABC_tran
TK
FtsK_SpoIIIE
DO-GTPase1
NACHT
UvrD-helicase
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
55990124
NCBI-ProteinID:
XP_035341701
UniProt:
A0A7H8QQV2
LinkDB
All DBs
Position
II:complement(join(492211..492623,492690..493251,493316..493403,493457..493596))
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AA seq
400 aa
AA seq
DB search
MSDYEDEMDVDSTAKGAAMQFSSNNTNFKGKKIVSDLPVGAEDNLPWVEKYRPSSLDDVQ
GHQDILSTINRFIDSHRLPHLLLYGPPGTGKTTTILALARRIYGSKNMRQMVLELNASDD
RGIDVVREQIKTFASTKQIFSVAPPAAKGSNSLGAFKLIILDEADAMTATAQMALRRIME
KYTANTRFCIIANYTHKLSPALLSRCTRFRFSPLKEADIRALVDKVIETENVRIQPDATE
SLVRLSKGDMRRALNVLQACHASSLPLPMRNAPKDQPPPEHELITEETIYNCIAAPHPSD
IREIMTTLLSTSDVTSCLNTVNTLKTNKGLALADILSALSEQLQTLEVPAQTRISWLEGL
AEIEWRLSGGGSEVIQTGGLVGVVRNGCELMGDKGVTMQS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattacgaggatgagatggacgttgactccacggccaaaggcgccgcaatgcaa
tttagctccaacaacacgaatttcaaagggaagaaaatcgtttctgacctgcctgttggt
gccgaggacaacttgccatgggttgaaaagtaccgacccagctctctagacgacgtgcaa
ggccaccaggacattctatctacaatcaacagattcattgactcgcatcgattgcctcac
ctgcttctctatggtcctcccggaacgggaaaaacaacaacaatcctagccctggcccgg
cgaatctacggcagcaaaaacatgcgtcaaatggtcttggaactaaacgcctccgacgac
agaggaattgacgtcgtccgcgagcagatcaagacatttgccagcacgaaacagattttc
tcggtcgcccctcctgcggcaaaaggcagcaattcactcggcgcattcaaactgatcatt
ctggacgaagccgatgcaatgacagcgactgcacaaatggccctgcgacgtattatggaa
aaatacacagccaatacgcgcttctgcattattgcaaactatacgcacaagctttcccct
gctttgttgtcgcggtgcacacgattccgattcagcccgttgaaggaggccgacattcga
gcccttgtcgacaaagttattgagacagaaaatgtccggatacagcctgacgcaacagag
agtcttgtcaggcttagtaagggtgatatgcgacgagcattgaatgtgcttcaagcttgt
catgccagcagtctaccccttcctatgcgcaacgctcccaaagaccaacctcccccagaa
catgaactcatcaccgaagaaaccatctacaactgcattgccgcccctcacccgtccgac
atccgcgaaatcatgacaactcttttgtctaccagcgacgtcacgtcgtgtctcaacaca
gtcaacacactcaagacgaacaagggtcttgctctcgccgacatactcagtgcgcttagt
gaacagctacaaacacttgaggtcccggcacaaacacgtatcagctggttagagggacta
gcggaaatcgaatggcggctctccggtggcggtagcgaggtgattcaaaccggtggtctc
gtgggtgttgtccgaaacggatgtgaattgatgggagataaaggagttacaatgcaatcg
tga
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