Talaromyces rugulosus: TRUGW13939_02638
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Entry
TRUGW13939_02638 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
trg01009
]
TRUGW13939_02638
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_02638
04131 Membrane trafficking [BR:
trg04131
]
TRUGW13939_02638
03036 Chromosome and associated proteins [BR:
trg03036
]
TRUGW13939_02638
Enzymes [BR:
trg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
TRUGW13939_02638
Protein phosphatases and associated proteins [BR:
trg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
TRUGW13939_02638
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
TRUGW13939_02638
Membrane trafficking [BR:
trg04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
TRUGW13939_02638
Chromosome and associated proteins [BR:
trg03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
TRUGW13939_02638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arb2
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
55990145
NCBI-ProteinID:
XP_035341722
LinkDB
All DBs
Position
II:join(551915..552557,552617..552905,552968..552981,553033..553171,553221..553333,553388..553515,553631..553844,553892..554003,554058..554105,554152..554215,554264..554356,554412..554497,554552..554625,554689..554795,554870..555103)
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AA seq
785 aa
AA seq
DB search
MEGDEDTVMGESRSLTSLAPSSLANHAATSVDGPSTTALQPSSVLGLQPPAAPVLSPPGL
SSDYNSAPLLTSSYTPDLHGLTRSIEDEALNAVKSSEESDSLMEENSDWSADDPATSSGL
TTANLATGLCYDIRMRYHCEVRPTADVHPEDPRRIYYIYKEICLAGLVEDPELPNSIKPL
APRPLQRIDVRDATEEEVQLVHTDEHFKFVENTRHMPDETLILLEESRDSIYFNQLTFAS
ALLSAGGAIETCLAVATRKVKNAIAVIRPPGHHAERDKTMGFCLFNNVSIAAKVCQRQLG
ESCRKILIVDWDVHHGNGIQKAFYDDPNVLYVSMHVYADGNFYPGGEEGNWDHVGEGAGI
GKNLNIPWKSQGMGDGDYMFAFQQVIMPIAIEFDPDLVIVAAGFDAAAGDELGGCFVTPA
CYAHMTHMLMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGEPPARLTATTASISAVQ
VAQTVMAAQSKYWRCMYPKAPPAQEGLFTDRFHDVIRQYQAKQLYDNYKLTSLWIYRATI
SKSFENQVLASANYDRAVPLIVIFHDPPEMMGIHHPITNKLEPHNCWMADAVKEYIAWAT
QKNYAVIDVNIPKHLSENGDAGKFEEEDADRPTQTEELAGYLWDNYIDESTHIFFMGVGD
AFFGVANLLINRDSIYQRVNSVVSFVSENPVRAVASPTQTWLSRWYKDNSLVFVSYTHGL
WHNEGRRKPSKRYGRLLESPKVGLNEMLLHHKMEVAEWIDTRISMHISSSSEEPEDNDDA
GMKKE
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggagggggatgaggataccgtgatgggcgagtcaaggtctctgaccagcttggcccca
tccagcctggcaaaccatgcagctacatcggtagatggcccgtctacgactgctcttcag
ccatcatctgttctgggtttgcagccgccagctgcgccagtgctgtcgccgcctggcctc
tcatcagattataattcagcacctttattgacaagttcttatacgccagatctccacgga
ctgactcggtccattgaagatgaggcgttaaacgcggtcaagtctagcgaagagtctgat
agtctcatggaggagaattccgactggtctgccgacgacccagcaacgtcttccggcctg
actactgccaatttggctactggtctttgctacgacattcgcatgcgctatcattgcgag
gtgcgccccacggctgatgtccaccctgaggatcccaggcgcatctattatatctacaag
gagatatgccttgccggcctcgttgaagatccagagcttccaaactctatcaaacccctc
gctccgcgtcctttgcagcgcatcgacgttcgagatgccaccgaggaagaggttcagttg
gttcatacggatgaacattttaaatttgtcgagaatacacgccacatgccggatgagacc
ttgattctgctagaggaatctcgagactcgatttactttaaccagcttacatttgcttcg
gcgctgctctcggccggcggagcgattgagacttgcctggcggttgcgacgcgcaaggtc
aaaaatgccattgcagtcattcgaccgccagggcaccatgccgagcgtgacaagaccatg
ggattttgtctgttcaataacgtgtcaattgccgccaaagtgtgtcagcgacagcttggc
gagtcgtgtcggaagattttgattgttgactgggatgttcatcatggaaacggcatccaa
aaagcgttttacgacgatcccaatgtgctctatgtatcgatgcatgtgtatgccgatggt
aatttctaccctggaggtgaggaaggtaattgggatcatgtaggcgagggcgctggtata
ggaaagaacctgaatattccatggaaatcccaaggcatgggcgatggagattacatgttt
gcatttcagcaagttattatgcccattgcaatcgagtttgacccagatttagtgattgtg
gctgctgggtttgatgcagcagctggcgatgagctgggagggtgttttgttactccagcc
tgctatgcgcacatgacacatatgctcatgacgctggctaatggaaaagttgccgtgtgc
cttgagggtggctataactttcgctcaatttccaaatcagctcttgccgtcacaaagact
ttgatgggagaacctcctgccaggctcacagccaccacagcgtcaatctcagcagtgcag
gtggcgcaaacggtcatggctgcacagtctaaatactggcggtgcatgtatcccaaggcc
ccgccagcgcaagaggggctttttactgacagattccatgatgtcatccgccagtaccaa
gccaagcagctatatgacaactacaaactcacaagcctgtggatctaccgcgcgacaatc
tccaagtcctttgagaaccaagtcttggctagtgcaaactacgacagggctgtccctttg
atcgtcatcttccacgacccacctgagatgatgggtatacaccatcctattacaaacaaa
ctcgagcctcacaattgctggatggcggatgctgtcaaagagtatattgcatgggcgacc
cagaagaactatgccgtcatcgacgtgaacattccaaaacacctgagtgaaaacggggac
gcgggcaagtttgaagaagaggacgcagaccgtcccacccagaccgaagaactggccggg
tacttgtgggataattacattgatgaatcgactcacatattctttatgggagtgggcgac
gcgttcttcggggtggctaatcttctcatcaaccgagacagcatataccagcgcgtcaac
agcgtagtgtcatttgtttctgaaaaccccgtgcgagccgtggcgtcaccgactcagaca
tggctatccaggtggtacaaagacaactctctcgtctttgtctcgtacacccacggactc
tggcacaacgaaggccgacgcaaaccatccaagcgatacgggcgcctgctcgagtctccc
aaagtcgggctcaatgaaatgctgctgcaccacaagatggaagtggccgagtggatcgac
acgcggatcagcatgcacatcagcagcagcagcgaggagcccgaggataacgacgatgct
gggatgaagaaggagtag
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integrated database retrieval system
