Talaromyces rugulosus: TRUGW13939_02714
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Entry
TRUGW13939_02714 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
trg
Talaromyces rugulosus
Pathway
trg03440
Homologous recombination
trg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TRUGW13939_02714
03450 Non-homologous end-joining
TRUGW13939_02714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trg03032
]
TRUGW13939_02714
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_02714
DNA replication proteins [BR:
trg03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
TRUGW13939_02714
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
TRUGW13939_02714
BRCA1-C complex
TRUGW13939_02714
NHEJ (non-homologous end-joining)
MRX complex
TRUGW13939_02714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_21
Motif
Other DBs
NCBI-GeneID:
55990221
NCBI-ProteinID:
XP_035341796
UniProt:
A0A7H8QP18
LinkDB
All DBs
Position
II:complement(join(733000..733008,733060..736746,736797..736898,736958..737021,737098..737125,737184..737190))
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AA seq
1298 aa
AA seq
DB search
MLAKIDKLSILGVRSFDNTRSETIQFHTPLTLIKINRLKTIIECLKYATTGDLPPNSKGG
AFIHDPKLCGEKEVLAQVKLAFKATSGAKMVATRSLQLTVKKTTRQQKTLEGQLLMVKDG
ERTAISSRVAELDQIMPQYLGVSKAILDSVIFCHQDESLWPMSEPSVLKKKFDEIFEAMK
YTKAIDNIKVLRKKQNEELAKFKIMEQHSKEDKDKADRAEKRSIKLQEEIEALREETHNL
SQEMRNAAELADKAWKESESYAQVLGALEGKRIEARSVQTSIDNLKRHLVELDESDEWLQ
STLEQFEARQIQYQEQEETLKEKYMEIKGRIENTRHQLGLKQAEHGKHENDKAQFERQVE
RRENMVREISRRNNIRGFDDTLDEAQIDEFMHKMRKMIKEHNQALERTRKEGQLEIRETQ
NALNQISQRKSTLQEVKNLARKQISDNDKEVASVQSRLNEIDVDEGKIAVFESKKEGVQS
RLDGFKEALRNSTWDKDIQDSNNDLKSLEDKSAQLNAELIAGTKRAGDLARLDHLKKELK
DRERQQETMSGAHGERLSKLVTQNWSPETLENEYHRVMEDETKSVTIAERDRDGVGRQLD
QVDFKLKNTRADLQKRQKERDECVKKIREAIDDDPTEYPDVLQTRQNLLDQTRKDAEQFA
GMHEYFNMCLDALDKKKMCRTCMRPFKNDTEMRSFRSRVEGLIKKNFSSSDEDLKQAETE
YEAARIVSTDYDTWVRLTENAIPELEKEEEQFQSQKEEYLIKIEDHDKTVDNLAEKKREV
ESLSKTVTSIVRVAGEIKSLQSQLAELTSKQQGPESSRTLEDIQTEIAGLGEKTRAIKMT
VTKLSNEKEQCRNDLNKSELELRDVKSSLDNASYQLEKKSGLLARIEEYKTSNVKQRGSI
ENADRDIEQLLPEMSKAQAKYDDISQRVEAKERELQQDLTKLSDSLRQLDLANDEIKSYQ
DRGGPGQLARSKQDLGGIHQTIESLEAEQSEITREINKISTQLTDSENTKRQYSDNLAYR
QACQTLEEVQEDVRQLEEQNAEVDRGRFKEESERWTRKHNALAAQQASKMGEMKSKDDQL
MQLLADWNTDYKDAAVKYKEAHIRVETTKAAVDDLGRYGGALDKAIMKYHGLKMEEINRI
IEELWQRTYRGTDVDTILIRSDNENAKGNRSYNYRVCMVKQGAEMDMRGRCSAGQKVLAS
IIIRLALAECFGVNCGLIALDEPTTNLDRDNIRSLAESLHDIIRTRQQQSNFQLIVITHD
EEFLRHMQCGDFSDYYYRVSRNERQKSIIERQSIAEVM
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgctagcgaaaatcgacaagctctctatccttggtgttcggtcctttgacaacactcga
agcgagacgattcaattccacacgcctctgacgttgatcaagattaaccgcctgaagaca
atcatcgagtgcctcaaatatgcgactactggtgatttaccccccaacagcaagggtgga
gcctttattcacgatccgaagctatgcggcgagaaagaagttttggcccaggtgaagctc
gccttcaaagctacgtcaggcgcgaagatggtagcaactcgaagcctgcaactcacggtg
aaaaagacgacccgtcaacaaaaaacgttggaaggccagcttttaatggtgaaggatgga
gagcgaacagcaatatcgtctcgtgtcgctgaactcgaccaaatcatgccccaatatctc
ggtgtatcaaaagcgatcctcgactccgttatattctgccaccaagacgaaagtctctgg
ccgatgagcgaaccttccgtgttgaagaagaagtttgatgaaatattcgaggctatgaaa
tacacgaaagcgattgataacatcaaagtcttgaggaagaagcagaatgaagaactcgcc
aagttcaagatcatggagcaacattcaaaggaagataaagacaaggcggaccgcgctgag
aagagatccataaaactgcaggaggaaatcgaggcattgcgcgaggagacacacaacctg
tctcaagagatgcggaacgctgccgaactggccgacaaagcttggaaagagtccgagagc
tatgcgcaagttcttggtgctctagaagggaagcggatcgaggcaagaagcgttcaaact
agtatcgataatcttaagcggcacctcgttgaactcgatgagtctgatgaatggctacaa
tccactttggagcaatttgaagctagacaaatccagtatcaagaacaagaagaaacccta
aaagaaaaatatatggaaatcaaggggcggattgaaaacacacgtcatcagttaggactc
aagcaagccgagcatggaaaacacgagaacgacaaggctcagtttgagcggcaagtcgaa
agacgagaaaacatggttagagagatttccagaagaaacaatattcgtgggtttgatgac
accctggacgaggcccagatcgatgagtttatgcacaagatgcggaagatgataaaggaa
cacaaccaggctctagaacgaactcgaaaggaaggtcagttagagattcgcgagacacag
aatgctctcaatcaaatttctcaacggaaatcgacacttcaagaggttaagaacttggca
aggaagcaaatttccgataatgacaaagaagtagcgtcggttcagagtcgtctaaatgaa
attgacgttgatgaagggaaaattgcagtttttgaatcgaagaaagaaggcgtacaatct
cgtcttgatgggtttaaagaagcccttcgaaattcgacgtgggataaagatatccaagat
tccaacaatgatctaaagtcgcttgaggacaagagcgcccaattgaacgcggaactaatt
gcaggaacgaaacgagctggtgatttggctcgcctagaccatctgaaaaaggagctcaaa
gaccgcgaacgccaacaagaaaccatgtcaggtgcccatggtgagcgtttatcgaaactt
gtcacgcagaactggagccccgagacgctcgaaaatgaatatcatagggtgatggaagat
gagacaaagtctgtgactatagctgaacgtgatcgtgatggggtcggacgacaattggat
caagtcgatttcaagctaaagaacactcgagcagatcttcagaaacgacaaaaggaacgc
gacgaatgtgtgaagaagattcgagaagccatcgacgatgacccaactgagtatccggat
gtcctgcaaacccggcaaaacttgctggaccaaacaagaaaagacgccgaacagtttgca
gggatgcacgaatatttcaatatgtgtctggatgcccttgataagaagaaaatgtgcaga
acgtgcatgagaccattcaaaaacgacaccgaaatgcgaagttttaggagcagagtagaa
ggcttgatcaaaaagaacttttcttcttcggacgaagatttgaaacaggctgaaactgaa
tatgaagctgcccgaatagtgagcactgattatgacacatgggttcgcctgacggaaaat
gccattcctgaactcgagaaagaggaagagcagttccagtcacagaaagaagaatatttg
attaaaatcgaagatcacgataagactgtggacaacctcgcggagaagaaacgagaggtg
gaatctctctccaaaacagtcacgtcgattgttcgtgttgctggcgaaataaagtctctc
caatctcaattggcagaacttacttccaaacagcaaggccctgagtcttcgcggacactt
gaagatattcaaactgaaattgcaggcctgggagagaaaacgagggctataaaaatgacg
gtcacaaaactttcgaatgagaaggagcagtgccgaaatgaccttaacaagtcggaactg
gaactcagagacgtgaagagcagcctggataatgctagttatcaactggaaaagaaatca
ggccttcttgctcggattgaagaatacaaaacatcgaatgttaagcagcgaggatctatt
gaaaatgctgatcgtgatatcgaacaattgttacctgaaatgtcaaaagctcaggcaaag
tatgacgacatcagtcaacgtgtcgaagcaaaagagcgagagcttcagcaagatttaaca
aaactgtcggatagtctgcgccagcttgatcttgcaaacgacgagatcaaatcttaccag
gatcgcggaggtccaggtcaattggctcggagtaaacaagacctaggaggcattcatcag
acaatcgagtctttggaggctgaacagagtgaaatcacgcgagagattaacaaaatctct
actcaactcacggatagcgagaataccaagcgacaatactctgataatctggcgtatcga
caagcctgtcaaacgttggaggaagttcaagaagacgttagacaattggaagaacaaaat
gcagaagttgatcgcggtcgtttcaaggaagaatccgaaagatggacacggaaacataac
gctcttgctgcccagcaagcgagtaagatgggtgagatgaaatcaaaagatgaccagctc
atgcaactcctagcagactggaacaccgactacaaggacgcggctgtcaaatacaaggaa
gcccatatcagggttgagactacaaaggctgctgttgacgatcttggccgttacgggggt
gcattggacaaggccattatgaaataccacggtcttaagatggaagagataaatcgcata
atcgaggagctttggcagcggacgtatcgaggaaccgatgtcgacaccattcttattagg
tctgacaacgaaaacgccaagggcaaccgctcttataactatcgagtttgcatggttaag
caaggtgccgaaatggacatgcgtggacgatgcagtgccggccagaaggtccttgcaagt
atcattattcgtctcgctttagctgagtgctttggcgtcaactgtggactcatcgcgctg
gacgaaccgacaacgaatctggaccgagacaacattcgctctttggccgagtcacttcac
gatatcattaggactcgtcaacaacaatcaaatttccaacttattgtcattacccatgac
gaagagttcctacgccacatgcaatgcggcgactttagtgattactattacagggtgtcg
aggaatgagaggcagaaatcgattattgagagacaatcgatcgctgaggttatgtga
DBGET
integrated database retrieval system
