Talaromyces rugulosus: TRUGW13939_02926
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Entry
TRUGW13939_02926 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
trg
Talaromyces rugulosus
Pathway
trg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRUGW13939_02926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_02926
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
TRUGW13939_02926
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Rrp44_CSD1
Rrp44_S1
OB_Dis3
PIN_4
CSD2
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
55990433
NCBI-ProteinID:
XP_035342006
UniProt:
A0A7H8QPM8
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All DBs
Position
II:join(1353049..1353244,1353307..1356191)
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AA seq
1026 aa
AA seq
DB search
MKSLRRDFSSNPHAQNVSSKVFIRSTKSGKVQKIVRELYLRQDIPCSSKLCTTCPAHAPA
DANGNIVPFVLSDQPAGSKAFPKGHYIVPDTNALLNGMDLFEHTGAFYDVIILQTVLEEL
KNLSLPLYNRLLSLIKSDEKRFYLFFNEFRLETHVRRDPNESINDRNDRAVRAVANWYGK
HLQKSVKPGKSIPVIVVLTDDKENLRKAKEESVVALSLSDYVSGLEDSDLLLDMINDSRE
EKGKKTELFYPEYYSMSKMMTGLRAGTMHQGVFNISPYNYLEGTVNVSAFDKSLLILGRD
NSNRAVSGDVVVVEILPKDQWKSPSSKIIDEEAVTKNDNPEDEENETVTTDREKKALQEE
VKKAHGKNAEGKPQPTARVVGIVKRNWRQYVGHVDASSTSLQTNSGRRQQTVFVLPMDKR
VPKIRIRTRQAADILGQRILVTVDGWDRDSRYPTGHFVRSLGELETKGAETEALLLEYDV
QYRPFPKVVLDCLPTEGHNWKVPVSKEDPGWQSRRDLRDLLICSIDPPGCQDIDDALHAR
PLPNGNFEVGVHIADVSHFVKPNNAMDLEASLRGTTVYLVDKRIDMLPMLLGTDLCSLKP
YVERFAFSTIWEITPNAEIVSADFTKSVIRSREAFSYEQAQIRIDDASKKDELTESMRTL
LHLSKVLRQKRMDAGALNLASPEIRIETESELNDPLTDVKTKAHLATNSLVEEFMLLANI
TVASKIYNAFPQTALLRRHAAPPPQNFEDLATQLQKKRDLRLDVSSSKALADSLDRCVDP
QNPFFNTLIRILATRCMTSAEYFTAGAHAEADFRHYGLASPIYTHFTSPIRRYADLIAHR
QLAAAIGYTSAEGLSRRRQLEDVCKNINYRHRNAQFAGRASIEYYVGQALKARGEMMAKN
KGGDKNVGVDEEGYIMRVFENGVVVFVPRFGIEGVVRLEDFMLPGDKERPDVHDNEQRRD
IAHRRESEFDPEESTVRVWDKNHPEPERSLQAELFEKVQVNVSSVKEEGGRGAGKRKVRI
LILGKA
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcttgcgaagagacttttcttcaaatccgcacgcccaaaatgtgtccagcaaa
gtcttcatacgctcaacaaaaagtggcaaggtccagaaaatagttcgagagctatatttg
agacaagatattccttgctcttcaaagctttgcacgacatgtccggcgcatgcgcctgcg
gatgcaaatggcaacattgtgccgtttgttctttctgatcagcccgccggtagcaaagct
tttccgaagggtcactacatcgtgccagataccaatgcgttgttaaatggaatggacctt
tttgagcacacaggagccttttacgatgtgattatcctccaaacagtcctcgaggaactc
aaaaacctttcgcttccgctctacaaccgtttactgtctctcatcaaatccgacgaaaag
cggttctacctgttcttcaatgagttccgccttgaaactcacgttcgtcgagaccctaac
gagtccataaacgaccggaacgatagagctgttcgcgctgtcgcaaactggtacgggaaa
cacctgcaaaaatctgtcaagccgggaaagtctatcccagtcattgtggtcctcacggat
gacaaggaaaacttgcgcaaagctaaagaggagtccgtggttgcgctgtcgctctctgac
tatgtgtctggcctcgaagactcagacctattactcgacatgatcaatgactcacgcgag
gaaaaaggcaagaaaaccgagcttttctatccagagtactattcaatgtcgaagatgatg
actggattacgtgctggaacaatgcatcagggcgtattcaacatttcaccatataattac
ttggaaggcactgtcaacgtgagcgcattcgataagtcgcttttgattcttggccgtgat
aatagcaatcgagccgtctccggtgatgtggttgtcgtggagattctgcctaaggaccaa
tggaaatcaccgtcttcgaagattattgatgaagaggcggttacgaaaaacgacaaccca
gaggacgaagagaatgagacggtgacgactgatagagaaaagaaagccctgcaggaagaa
gtcaaaaaagcacatgggaaaaatgccgagggtaaaccccaacccactgcccgggtcgtc
ggaattgttaaacggaactggagacaatacgtcgggcatgtcgatgcgtcgtcaacatcc
ttgcagaccaattctggaaggcgtcagcagaccgtttttgtgttgcctatggacaaacga
gttcctaaaatccgaatccggacgcgtcaagcagccgacattctcggacaaaggatcctg
gttactgttgatggctgggatcgtgactcccgttatcctacaggccactttgtgcgatct
ttgggagaactggagaccaaaggagccgagaccgaagctctccttctcgaatatgatgtg
caatatcgaccattcccgaaggtggttctggactgtcttcctactgagggacataactgg
aaggtgcctgtgagcaaagaagaccctggctggcaaagccgtcgtgatctgcgagacctc
ttgatctgtagtatcgatcctccgggctgtcaggatattgatgatgccttacacgcacgt
cctttacccaatggcaactttgaagtcggtgttcacattgctgatgtgtctcactttgtg
aaacccaacaacgcgatggatcttgaagcaagcttgcgtggtactactgtttacctggtt
gacaaaagaatcgatatgcttccaatgcttctcggaactgatctgtgttcgttgaagcct
tacgtggagcgtttcgccttttccaccatctgggaaataacaccaaacgcagaaatcgtg
tctgctgattttacaaagtcagtaatcaggtctcgagaggctttcagttacgaacaggct
cagatccgtatcgatgacgcatcaaagaaggatgaactgactgagagcatgcgcacgctc
ctgcatctttccaaggtcttgcgccagaaacgtatggacgctggtgccctgaaccttgcg
tccccagaaatccgaattgagaccgagtcggagttgaacgatcccttgacggacgtcaag
accaaggcgcatttagcaacgaatagtctggttgaagagtttatgcttctcgccaacatt
acggtagcttctaagatctataacgctttccctcagacagctctgttgcgtagacacgca
gcgccgcctcctcagaatttcgaggacctggctacacagttgcagaaaaagcgtgacctt
aggcttgacgtatcgagctcgaaagcactagctgattctcttgatcgctgtgtcgaccca
cagaacccctttttcaacactttaatccgtatcctggccactcggtgcatgacttcggcc
gagtatttcactgctggtgcacatgctgaggctgatttccgccattacggtcttgcgtca
cctatttacacacactttacgtcgccaattcgtcgttacgctgatctcatcgctcaccgc
cagcttgccgctgcaattggatacacttcggcagaaggactcagccggcgtcgccagctg
gaagatgtgtgcaagaatatcaactaccgccatcgcaatgcacaattcgcaggaagggct
agcatcgagtactacgttggccaggcactgaaggctcgcggcgaaatgatggccaagaac
aagggaggtgacaagaatgtcggcgtcgacgaagaaggatacatcatgcgagtgtttgag
aacggtgtggttgtgtttgttcctcgattcggtatcgagggggtagtccgcctggaagac
ttcatgctaccgggcgataaggagaggcccgatgtgcatgacaacgagcagagaagagat
attgcgcatcgacgtgagagtgaatttgatccggaagagtctactgtgcgcgtgtgggat
aagaatcaccccgagcccgagcgatctctccaggcagaactgttcgagaaggttcaagtg
aatgtcagctctgtgaaggaggagggcggacgcggcgcaggcaaacgaaaagtgcgaatt
ctgatattgggcaaggcatga
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