Talaromyces rugulosus: TRUGW13939_02957
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Entry
TRUGW13939_02957 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
trg
Talaromyces rugulosus
Pathway
trg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRUGW13939_02957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_02957
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
TRUGW13939_02957
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rcd1
baeRF_family10
TAF4
TFIIA
Motif
Other DBs
NCBI-GeneID:
55990463
NCBI-ProteinID:
XP_035342036
UniProt:
A0A7H8QPQ8
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Position
II:join(1423316..1423781,1423844..1423999,1424060..1424435,1424490..1424670)
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AA seq
392 aa
AA seq
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MLQAQTQHVFSHQHQYPQAEPSWLHQQQQQQQQQQQHHQAQHQHQHTSIAQQHAQAHAAA
AAAVAHQQHYNRIVMAGNNSVAVAAAGNQGQSSANPAGADAAGAGLEGVHTEDNRKIFLW
VTELLDPNRRETALMELSKKREQVPELALVIWHSFGVMTALLQEIISVYPLLNPSQLTAA
ASNRVCNALALLQCVASHNETRTLFLNAHIPLFLYPFLNTTSKSRPFEYLRLTSLGVIGA
LVKNDSSDVINFLLTTEIIPLCLRIMETGSELSKTVAIFIVQKILLDDTGLNYICATYER
FYAVGTVLSNMVTQLVEQQTVRLLKHVVRCFLRLSDNNRAREALRQCLPEPLRDATFSSV
LRDDAATKRCLAQLLINLSDNVDAGSTAGAGM
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaggctcagacccagcacgtcttttcccaccagcaccagtatccgcaggctgag
ccgtcgtggctgcaccagcaacagcagcaacaacagcaacagcaacagcaccaccaggcc
cagcaccagcaccagcacacgtcaattgctcagcaacatgcccaagcccacgctgccgcc
gctgctgccgtagcgcaccagcaacactacaatcgtatcgtcatggccggaaacaactct
gttgctgttgctgccgccgggaatcaaggccagtcctcggccaatcccgcgggcgcggac
gctgcaggtgccggtctcgaaggggtacacaccgaagacaatcgcaaaatcttcctttgg
gtgaccgagcttctcgatcccaatagacgcgagactgctcttatggaacttagcaagaag
cgcgagcaagttcccgaactggctctcgtcatctggcattcgttcggcgtcatgacagcc
ctgctccaggaaatcatctcggtatatccactactcaacccctcgcagctcactgccgct
gcctctaaccgggtgtgcaatgcgctagcattgcttcaatgcgttgcatcgcacaacgag
acacgcactttgtttctgaacgctcacattcccctatttctctacccattccttaatacc
acatcgaaatcgcgcccttttgaatacttgcgtctcacgtcgcttggtgtcatcggcgcc
cttgtgaaaaatgattcttccgatgtgatcaatttcctccttacaaccgagatcattcct
ctctgccttcgtatcatggagactggctcagagttgagcaagaccgtcgccatatttatt
gtccagaagatattgctggacgacactggtctaaactatatatgcgctacttacgagcga
ttctatgccgttggaacggtgctgagcaatatggttacacaattggtggagcaacaaact
gtgcgactgctcaaacatgtagtccgctgttttctaaggctaagtgacaacaaccgcgct
cgcgaagccttacgacaatgtctgccggagcctctgcgggatgcgactttctcatccgtt
ctccgtgacgatgctgccactaagcgttgcttggctcagctgttaatcaatctttcagat
aatgtagatgccggaagcactgcaggtgctggcatgtga
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