Talaromyces rugulosus: TRUGW13939_03046
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Entry
TRUGW13939_03046 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K18748
protein SSD1
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_03046
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
TRUGW13939_03046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
Rrp44_CSD1
CSD2
DUF5774
Motif
Other DBs
NCBI-GeneID:
55990552
NCBI-ProteinID:
XP_035342125
UniProt:
A0A7H8QPR2
LinkDB
All DBs
Position
II:join(1666121..1666217,1666276..1668818,1668876..1669235,1669292..1670295,1670367..1670406)
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AA seq
1347 aa
AA seq
DB search
MEQQGQSGVPGPAGRRLHIAHRRSPSELTPLMMEQLAIQQQIELLQQQQQQIAATHQQYV
NMGLLQPQQPMGQVPGYSPNMQGQGSMSGVSPQVNAFQFPMQQQQMGGAMNNGHSHRRNQ
SALPGMGMGPPPAPSSGASGSAFADIHQGNQNRENNAPSRGRGAPAGGGHQRRHSLALPE
AKKAAELAQQKRATAGFQFPAPSPSPGGSGSPADSTPPDDKPKTPQGLGLQRAGGSFRGG
AHGRSQSMAVGRGAAGFQFPIPESAQAEPPKRGHGRSQSRNFDGNWRQPNNNNNNNQDQQ
KSHQGNQQHGGGGFQPGHRSRGSMNQSIGQFQYPNQPQLIQLPQGQVVMAPQMFNGQQLN
PLQLAQLQAMQQNGQMNGSIGLQASQHAPQQLSAQQQQQQRKTLFTPYLPQANLPALLSN
GQLVSGILRVNKKNRSDAYVTCAELDADIFICGSKDRNRALEGDFVAIELLDVDEVWTQK
REKEEKKKRKDITDTRSGDKVSRSDSGANGDNQQVGPDGSIRRRGSLRQRPTQKKNDDVE
VEGQSLLLVEEDEISDEQKPLYAGHVVAVIERVAGQMFSGTLGLLRPSSQATKEKQEAER
AARDGGHGRQSDRHQDKPKIVWFKPTDKRVPLIAIPTEQAPRDFVEKHQDYANRIFVACI
KRWPITSLHPFGTLVEQLGEMGDLKVETDALLRDNNFAADEFSEAVLKNVGWEDWTTTSE
GDALFASRRDFRDEKTFTIHPTGTRELADAFHMKKLADGKIEIGIHVVDIAHFVKQNSLV
DREAKKRGTGVYLMNRVVNMLPSRLSTDVCSLLPGQERLVVSVVFQVDPSTGAVDDNVWI
GKGVIKSSGKLTYDDVDATLNGNSDLPLEGATADEIRLLGSITTKFKEARYGNRATNIPS
LRLLYQLDDENMPVEHNIFDSSPTHELIEELSHKANFFVARKVYAAMPDKAFLRRQAVPN
SRRLQSFVDRMNRLGFDIDPTSSGSLQASLFKIQDLDLRKGMETVLVKAMQRAKYFVAGN
LTEEQRQHYALNLPVYAHFTNPTRRYADILVHRQLDSILSEGAIEFSEDVETLTKTAEQC
NNKKDSAHNAQEQSVHIESCRVMDKKRQELGGDLISEGIVLCVYESAFDVLLPEFGFEKR
VHCDQLPLKKAEFRKETRVLELYWEKGVPSSAYIPEDERPNASSSRAAHAAAAAQQAEAA
RERAREREEAQRKQTETGTMSTDDVDALFDDDDDMSEVTEMAAGVSLNSSADRTTHSMPP
SPTRNGHPDQAPHRTRSDPKITVSTSDTPEAKMTNKEKYLDLFKLREENGEYIQDVTEMT
RVPIILKTDLSKSPPCLTIRSVNPYAL
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacaaggccaatccggggtccccggccctgccggtcgccggctccatatagct
catcggagaagtccatctgagctcactcctttaatgatggaacaactggcgatccaacag
cagatcgagctgcttcagcagcagcaacaacaaattgctgcaacccatcagcaatacgtc
aacatggggctcctacaaccccagcaacccatgggccaggttcctggatattctcccaac
atgcaaggacaggggtcaatgtccggcgtttctccccaggttaacgctttccaatttcct
atgcagcaacaacaaatgggtggtgccatgaacaatggtcactctcaccgtcgtaaccag
tctgcccttccgggcatgggcatgggccctcccccggccccctcctccggcgcttctggg
tcggcatttgcagatatccatcaagggaaccaaaatcgcgagaataacgcaccttctcga
ggacgaggtgccccagccggtggtggccatcaacgccgtcactccttggccctgcccgag
gcgaagaaagccgccgaactagcgcagcagaaacgagccaccgctggttttcagttcccc
gctccaagcccaagccccggagggtccggtagccctgccgactccacgcccccagatgac
aagccaaagacgccgcaaggactcggtttacagcgtgcaggagggagctttcgtggtggc
gctcatggaagaagtcaatctatggccgttggcagaggtgctgctggcttccagtttccc
attccagagagcgcgcaggccgaaccacccaagcgtggtcacggccgatcacaatcaaga
aactttgatggcaattggagacagccaaataataataacaacaacaaccaagaccagcaa
aagtcccaccagggcaatcaacaacatggcggcggtggcttccagcctggccatcgttct
cgagggtcgatgaatcagtcaattggtcaatttcagtatcccaatcaaccccaacttatc
cagctaccccaaggccaggtcgttatggcgccccaaatgttcaacggccagcaactcaac
cctcttcaactcgctcagcttcaggccatgcagcaaaatggccagatgaacggctcaatt
ggtcttcaagcaagccaacatgcacctcagcaactctctgctcagcagcagcagcagcaa
cggaagaccctctttaccccttatcttccccaggctaacctacctgccttactgagcaac
ggacaattggtttctggcatactgcgtgtgaacaaaaagaaccgttcagacgcctacgtc
acttgtgcagaacttgatgcggatattttcatttgtggtagcaaagaccgcaatcgcgct
ctcgagggcgacttcgtcgccatcgagctgttggatgtcgatgaagtctggactcagaaa
cgtgaaaaggaagagaagaagaaacgaaaggacatcaccgatacgagatcaggtgacaaa
gtttctcgatctgattccggcgcaaacggtgataaccagcaagttggccctgatggcagc
attcgacgccgtggtagtctgcgtcagcgtcctactcaaaagaaaaacgacgatgtggaa
gtcgaaggccaaagtcttctacttgttgaggaagacgaaatcagtgatgagcagaaacct
ttgtatgcgggccacgttgttgccgttattgaacgagttgccggtcaaatgttctctggt
acccttggccttctccgcccaagtagccaagcgacaaaggagaagcaagaagccgaacgt
gccgcccgagatggtggtcatggtcgacagtccgaccgtcatcaagacaaacccaagatt
gtatggtttaaacctaccgacaagcgtgttcctttgatcgccattcccactgaacaagca
cctcgcgattttgtcgagaaacaccaagactacgccaaccgtatttttgtcgcctgtatc
aagcggtggcctatcacctcgctccatcctttcggtacattggtggaacagcttggtgag
atgggtgacttgaaggtcgaaactgatgctcttctccgtgacaacaattttgcggctgat
gagttctccgaagccgtgttgaagaatgtcggctgggaggactggaccactacttctgag
ggtgatgccctgtttgcatcccgtcgtgacttccgggacgagaagacctttaccatccac
cctacgggcaccagggagctggccgatgcgttccacatgaagaaactggccgatggcaag
attgaaatcggtatccatgtagttgacattgcgcactttgtcaagcagaactctctcgtg
gaccgtgaagcgaagaagagaggtaccggtgtttatctgatgaaccgagttgtcaacatg
ctaccatctcgtttgtcaaccgatgtttgctcgttgcttcctggtcaggagcgtttagtc
gtcagcgttgtcttccaggtggacccttcgactggtgccgtggatgataacgtctggatt
ggaaagggagttatcaagagctctgggaagctgacctatgatgatgtggatgccactctc
aatggaaactctgatcttccgttggaaggggcaactgctgatgaaatccgtcttttgggg
tccatcacaaccaagttcaaggaagccagatatggcaaccgggcgaccaacatcccatcg
cttcgccttctctaccagcttgatgacgaaaacatgccggttgagcacaatatattcgac
tcttccccaactcatgaattgatcgaagagctcagccacaaggccaacttcttcgtcgca
cgcaaggtctacgcagcgatgcctgataaggcattccttcgacgccaagctgttcccaac
tctcgccgacttcaaagctttgttgacagaatgaacagacttggctttgatatcgaccct
accagcagcgggtccctgcaagccagtcttttcaagatccaggatctcgatctccgcaag
ggtatggaaactgtcttggtcaaagcaatgcaacgcgccaagtactttgttgccggtaac
ttgaccgaggaacaacgccagcactatgcgctcaacctgcctgtctatgcgcacttcaca
aaccctactcgacgctacgccgatatccttgttcatcgtcaactcgattccattttgtca
gaaggcgccattgaattctccgaagatgtcgagaccttgacgaagacggccgagcagtgc
aacaacaagaaggactctgctcacaacgctcaagaacagagtgttcacattgaatcctgc
cgtgttatggacaaaaagagacaagaacttggcggtgatcttatcagcgagggtattgtg
ctctgtgtatacgagtcggcctttgatgttcttctccctgaattcggcttcgaaaagcgt
gttcactgtgatcagcttcctttgaagaaggcagaattccgcaaagaaactcgtgttctt
gaattgtactgggagaagggtgtgccttcttctgcttacattcccgaagacgaacgcccg
aacgcaagcagctcaagagcagctcatgctgccgctgctgcacaacaggcggaggcagct
cgcgaacgcgccagagaacgggaagaggctcagcggaagcagacggagaccgggactatg
tctaccgacgacgttgacgctctgttcgacgacgacgatgatatgtcggaagtcaccgaa
atggccgctggcgtttcgctcaattcttcggccgatcgaacaacccacagcatgcctcct
tcacctacacgaaacggccatcccgaccaggctccacaccgcacccgctccgatcctaag
attacagtgagcactagcgacaccccagaggcgaagatgacgaacaaggagaaatacctt
gatcttttcaagcttcgtgaagaaaacggggagtacattcaggatgttaccgaaatgact
cgtgtccctattatccttaagaccgacttgagcaagagtccaccttgcttgacaatccgt
tctgtcaacccttatgctctttaa
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