Talaromyces rugulosus: TRUGW13939_03075
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Entry
TRUGW13939_03075 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K12877
protein mago nashi
Organism
trg
Talaromyces rugulosus
Pathway
trg03013
Nucleocytoplasmic transport
trg03015
mRNA surveillance pathway
trg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRUGW13939_03075
09122 Translation
03013 Nucleocytoplasmic transport
TRUGW13939_03075
03015 mRNA surveillance pathway
TRUGW13939_03075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_03075
03041 Spliceosome [BR:
trg03041
]
TRUGW13939_03075
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TRUGW13939_03075
Spliceosome [BR:
trg03041
]
Complex C
Other components
EJC/TREX
TRUGW13939_03075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
55990581
NCBI-ProteinID:
XP_035342154
UniProt:
A0A7H8QQ35
LinkDB
All DBs
Position
II:join(1738893..1738930,1738984..1739021,1739076..1739171,1739232..1739295,1739349..1739436,1739499..1739624,1739694..1739708)
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AA seq
154 aa
AA seq
DB search
MSDSNEPFYLRYYSGHSGRFGHEFLEFDFRTLGDGRSASARYANNSNYRNDSLIRKEMCV
SSLLIAEIKRIIKDSEIIKEDDSKWPQKNKDGRQELEIRLGNDHISFETAKIGSLVDVTE
SADPEGLRVFYYLVQDLKALVFSLISLHFKIKPI
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactccaatgaacccttctatctgcgctactactcaggtcactctgggcggttc
gggcatgaatttctagaatttgactttcgcaccctcggcgatggccgcagtgcttcggct
cgctatgctaacaactcgaactaccgaaacgactcgcttattcgcaaagagatgtgcgtc
agctcccttctgatcgccgaaatcaagcgcatcatcaaggacagcgagattataaaggaa
gacgattcgaaatggccgcagaagaacaaagacggacgacaagaactcgagattcgacta
ggcaatgatcatatttcgttcgagaccgcaaaaatcggctccctagtcgatgttaccgaa
tccgcagacccggaaggactgcgcgtcttctactatctcgtccaggatctgaaggcgctg
gtgttttctctcatttcgttgcatttcaagattaagccgatctaa
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