Talaromyces rugulosus: TRUGW13939_03143
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Entry
TRUGW13939_03143 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K12821
pre-mRNA-processing factor 40
Organism
trg
Talaromyces rugulosus
Pathway
trg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRUGW13939_03143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trg03041
]
TRUGW13939_03143
Spliceosome [BR:
trg03041
]
Complex A
U1 snRNP components
U1 related factors
TRUGW13939_03143
Complex B
TRUGW13939_03143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
T3SS_needle_F
Motif
Other DBs
NCBI-GeneID:
55990648
NCBI-ProteinID:
XP_035342221
UniProt:
A0A7H8QSD8
LinkDB
All DBs
Position
II:join(1933277..1933399,1933458..1933612,1933670..1934714,1934773..1935786)
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AA seq
778 aa
AA seq
DB search
MSAGSTLWQEARNADGRVYYYNVQTKATQWAKPAELLTPVERALSNQPWKEYTAEGGRKY
WYNTESKQSTWEIPEVYKTALAQAQPPAAPSASASTFVAGGTTSFSPYPQQQRERDDYDR
GAPDRRGGYGGLDTNNLITSQQTDPEYSSFEEAESAFIKLLRRCNVQPDWTWEQAMRATI
KDPQYRALKDPKDRKAAFEKHAAEVRMQERDRAKERFAKLRADFNTMLKSHPEIKHYSRW
KNIRPIIEGETIFRSTNDENERRQLFEEYIVELKKTHVEQEAVTRKSAMDDLVKILNALQ
LEPYTRWAEVQKALDANDRIQEDDKFKTLSKSDILTAFENHIKSLERTFNDARQQHKAAK
ARRERQHREGFLELLRELRSQGKIKAGSKWMLIHPLIKDDPRYVAILGQGGSSPLDLFWD
MVEEEEKSLREPRNDVLDVLDDKRYDIDAKTTFEDFMSVMATDRRTANIDTDILQLIFQR
IQERIQRRTEDEKHAADRHQRRAVDALRSRIKHLEPPVRLGDTWESVRPRVERFEEYTAL
DSDDIRQSAFDKFIRRLKEKEEDVDRERDRDRGSRRGGDHHDRSDRDSRNGSYRSDRRAR
PSRTPEPDPYEADRRKAQADRERSYRKVSGLSPIHERRDDRDRTRDRERERDRDGRRGPV
HYDRERRDREEERERLYRTRGDPRGSRDELDYGGDTRSTVSNDRRRRRDSDAESVASRSA
KRHRRDDREKDQSRDPSHRDRDRRSIGSRTPAPLAEEESKKEEKAVHSGSEEGEIEED
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccggttctactctgtggcaggaggcgcgcaacgccgacggtcgcgtatactat
tacaatgttcaaacaaaggcaacgcaatgggcgaaacccgccgagctgttgactcctgtg
gagcgcgcactttcgaatcagccatggaaggaatatactgcagagggtggacggaaatat
tggtacaatacagaaagcaaacaaagcacttgggagatccccgaagtttacaaaactgca
cttgcacaggcccaacctcctgcagcgccatctgcaagtgcttctacattcgtcgctggt
ggaaccacctcgtttagcccgtacccgcaacaacagcgcgaacgagacgattatgatcgc
ggtgcccctgatcgtcgtggaggctatggtggactggatacaaacaatctcattacctct
caacagactgacccagagtacagctcctttgaagaagccgaaagcgcattcataaagcta
ttacggagatgtaacgtccagcctgactggacctgggaacaggcaatgcgtgctaccatc
aaagacccccaataccgtgctctcaaagatccaaaggaccgaaaggctgcctttgagaag
catgcggctgaagttcgcatgcaagaacgcgaccgcgccaaggagaggttcgctaaactt
cgcgcagatttcaatactatgctgaaaagccatccggaaatcaagcactatagcagatgg
aaaaatatccgtcccattatagaaggcgaaactattttcaggtctacaaatgatgagaac
gaacgccgacagctcttcgaagagtatattgttgagctcaaaaagactcacgtggagcaa
gaggccgtgacccgcaaatccgcgatggacgacctcgtgaagattttgaacgctctccag
cttgaaccttataccagatgggccgaggtgcaaaaagcgctcgatgccaatgaccgaatt
caggaggatgataagttcaagaccctgagcaaatcagatattttgactgctttcgagaat
cacatcaaatctctagagcggacattcaatgatgctcgtcagcagcacaaggctgccaag
gccagaagagaacgacaacaccgtgaaggcttcctagagcttctcagagaactacgctca
caaggaaaaatcaaggccgggagtaaatggatgctcatccatccgctgattaaagatgat
cctcggtatgtagcaatcctaggccaaggtggctcaagtcctctggatctattctgggat
atggtggaggaagaggaaaaatcgctacgagaaccacgaaatgacgttcttgatgtccta
gatgacaaacgttatgacatcgatgccaagacaacattcgaagatttcatgtctgttatg
gccactgaccgccgtacagccaatattgatactgatatactccaactcatcttccagcgc
attcaggagaggatccagcggcgcacagaggatgagaaacacgcggctgatcgccatcaa
cgtcgtgctgtggatgccttgcgttctcgcatcaagcatttggaaccccccgttcgcctt
ggagatacctgggaatcggtccggccgagggttgaaaggtttgaagagtatactgccctt
gattctgacgatattcgtcaaagtgcctttgacaaattcatccgtcggctcaaggaaaag
gaggaagatgtcgatagagaacgtgacagggaccgtggatcccgccgtggtggtgaccat
catgaccggtctgatcgagactcgcgcaacggctcatatcgctctgaccgccgagcgaga
cccagtcgaacaccagaaccagatccatacgaagcggaccgccgcaaagcccaagcagac
cgcgagcggtcatatcgcaaagtaagcggtctatcacctattcatgaacggagggatgat
cgtgatcggacacgggacagagaacgggaacgagaccgcgatggacgacgggggccagtc
cactatgatcgcgaacgccgtgaccgagaagaagagcgtgagcgactataccgaacccgt
ggcgacccacgtggcagtcgtgatgagttggactatggaggagacacacggagcactgta
agtaacgatcgtcgtcgtagacgtgatagcgacgccgaaagcgtagccagccgcagcgcc
aaacggcacagacgcgacgaccgtgaaaaagatcaatcgcgggaccccagccatcgtgat
cgagaccggcgttctattggtagccgtaccccggcgccgttggccgaagaagagtccaag
aaagaggagaaggcggtccactctggtagcgaagagggggaaattgaggaagattag
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