Talaromyces rugulosus: TRUGW13939_03274
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Entry
TRUGW13939_03274 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
trg
Talaromyces rugulosus
Pathway
trg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
TRUGW13939_03274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_03274
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
TRUGW13939_03274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
CDT1_C
MutS_IV
MutS_II
MutS_I
Sigma70_r2
Motif
Other DBs
NCBI-GeneID:
55990779
NCBI-ProteinID:
XP_035342352
UniProt:
A0A7H8QQD5
LinkDB
All DBs
Position
II:join(2277800..2279221,2279569..2279637,2279688..2282519)
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AA seq
1440 aa
AA seq
DB search
MSTRRSTRSRLAASHSFQGQAGIQRFTRSTKPGASPSSLLLLDGKNVTFQKTTGLLPVSA
TTPCLLTASPSKKRKLNELDPEQEQEEDEPAVQEIEKESAVQDTPSKTIKFSSLSVSTPP
PPKRSTSISRTTSRKRRSVHVDSTFTIPEQQQQQQQQQQQPTSQCKNIREADEEEIFPAA
LDQLVNFHSAFLKTISLHYTHKGSTAPADLKELLPRIEKLWKKRKVVAKDVQRIVHVWDD
EETQQLRFRISNYGLGKVCLERVSGTAGPVNENELHTRFVKLLGDKWRQRRGSKDGENDD
GSAFVEAMGLATIHECLTPFTALRKGQQRLQDLKGGVIKVKTAMLKASSNISESQVKTAR
DPTVDRRKGLLERIKGKELLQSKLGPPPTKEQMLRRAAAQRAEDVARVLALLRPPRLMAK
NGNSAVQKKPFKWEALIQTVQDSLRSPIAAEEVAACLDILGQKEVAADWIDIVTIEHLTI
QHHYHQTVNMSSRPELKVDDEVGFIRFFRSLPTKDVAGTEAANPATVRVFDRGDFYTAHG
SDAEFIARTVYKTTSVLRTLGRSDSGGLPSVTLSVTVFRNFLREALFRLNKRVEIWVSAD
SGRGQWKRGKQASPGNLQDVEEELGGGTAGTAMDSAPIILAVKVTAKSAEAKNVGVCFAD
ASVRELGVSEFLDNDVYSNFESLVIQLGVKECVVQLDSSKKDAELAKLKAIADTCGIAIT
ERPVADFGTRDIEQDLVRLLREERSAATLPQTELKLAMGAAASLIKYLGVMSDSTNFGQY
QLYQHDLSQYMKLDASALRALNLMPGPRDGAKNMSLYGLLNHCKTPVGSRLLAQWLKQPL
MDLAEIEKRQQLVEAFVNDTELRQTMQEEHMRAIPDLYRLAKRFQRNQANLEDVVRVYQV
AIRLPGFIRSFENVMDEQYQTPLDAQYTSKLRGFSDSLSKLEEMVETTVDLDALDNHEFI
IKPEFDESLRVIRKKLDKLRYDMDVEHRRVARDLNQDMEKKLFLENHRVHGWCFRLTRNE
AGCIRNKREYQECSTQKNGVYFTTKTMQELRREHDQLSTNYNRTQSGLVQEVVNVAASYC
PILEQLAGTLAHLDVIVSFAHVSVHAPTAYTRPQMHPRGTGNTVLKEARHPCMEMQDDIS
FITNDVSLVRDESSFLIITGPNMGGKSTYIRQIGVIALMAQIGCFVPCTEAELTIFDCIL
ARVGASDSQLKGVSTFMAEMLETSNILKSATSESLIIIDELGRGTSTYDGFGLAWAISEH
IITEIGCFGLFATHFHELTALADRYPKSVQNLHVVAFIGDDKEQQEGKKKREVTLLYRVE
PGVCDQSFGIHVAELVRFPEKVVNMARQKAEELEDFTSATAEPQQQQQNQNSAALDAYSQ
EEVEEGSALLKSMLLKWKAEIEGPGKESMTAEEKRKVMRDLVAADAGLQTNKVFQGIKTL
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccagacgctcgacccggtctcgcctggctgcatcgcactccttccagggccag
gccggcattcagcgcttcacgcggtcaaccaagcccggtgcttctccttcgtcgttgctc
cttctcgatgggaagaatgtcactttccaaaagacaactgggctgctgcccgtgtcagcg
acgacgccgtgcctgctgactgcgtctccttccaagaagcggaaactcaacgaacttgat
ccggagcaggagcaagaggaagatgagcctgctgtgcaggaaatagaaaaagagtctgca
gtccaggatacgccgtccaagactatcaagtttagttctctttccgtgtcgactccccct
cctcccaaacgaagcaccagcatatcccgaaccacctctcgcaaacgtcgttcagttcat
gtcgactcgacttttacaattccagaacaacaacaacaacaacaacaacaacaacaacag
cccacatcacaatgcaaaaacatccgcgaagcggacgaagaagaaatattccccgccgcg
ctcgatcagctcgtcaactttcattctgcgtttttgaaaactattagcctccactacacg
cacaagggctcaactgcgcccgccgatctaaaagagcttctacccaggatagaaaaactg
tggaagaaacgaaaagtcgtcgccaaggatgtgcaacgcattgtgcacgtatgggatgac
gaagaaactcaacaactgcgcttccgcatttccaattacgggcttggaaaagtctgtctc
gagcgcgtgtcgggcactgctggccctgttaatgagaatgagctgcatacgcgattcgta
aagcttcttggtgataaatggaggcagcgacgaggatcaaaagatggtgaaaacgatgat
ggatcggcctttgtggaagcgatgggactcgccacgattcacgagtgtctcaccccattc
accgcactacgaaaaggacagcagcgactacaagacctcaaaggaggcgttatcaaagtc
aagaccgcgatgctgaaagccagcagcaacataagcgaaagccaagtcaagaccgcccgt
gacccgaccgttgaccgccgcaaaggtttgctcgaacgtatcaagggcaaggaactgtta
cagtccaaactcggaccacccccaacaaaggaacagatgcttcgccgagctgctgcccag
cgagcagaggatgtcgccagagtgcttgctctgctgcggccaccgcgcttgatggccaaa
aacggaaattcggctgtgcagaagaagcccttcaagtgggaagccttgattcagactgtt
caagactcgctgcgcagtcctattgctgccgaagaagtggctgcctgcttggacattctc
gggcagaaagaagttgcggctgactggatcgatattgtcacaatcgagcatctcaccatt
caacatcactaccaccaaaccgtcaacatgtcttcgcgaccagagttaaaggtcgacgac
gaagtcggcttcattcgcttcttccgctccctccctaccaaggacgtcgccggcaccgaa
gcagcaaacccagcaaccgtacgcgtattcgaccgcggcgacttttacacagcccacggc
agcgatgccgaatttattgcgcgcacagtttacaaaactacctcggtgttgcggaccctt
ggccgtagcgactctggtggtctgccgtctgtcacgctcagcgtgacagtgtttcggaat
ttccttcgcgaggctctgtttcgtctgaataagcgtgtggagatttgggtgtctgcagat
tctggaaggggtcagtggaaacgtgggaaacaggctagtccggggaatttgcaggatgtt
gaggaagagcttggcggtggtactgccggcacggctatggactcggcgcctattattctc
gcggtcaaggttacagcgaaatccgccgaggcgaagaatgttggggtgtgttttgcggat
gccagtgttagagagcttggtgtcagcgagttccttgacaacgatgtttactcgaatttc
gagtcgcttgtcattcagctcggagtcaaggagtgtgttgttcagctggatagctccaaa
aaggatgcagaactggcaaaactaaaagccattgctgatacctgtggaatcgccatcacg
gagcgtcccgttgctgattttggcaccagagatatcgaacaggacctggtcagactactg
cgtgaggagcgctccgcggccaccctccctcaaaccgaactcaagctggccatgggtgca
gctgcatcgctcatcaaatacttgggcgtcatgtcggactcgaccaattttggccagtat
cagctctaccagcacgacctgtctcagtatatgaagctcgacgcttctgctctgcgcgcc
ctcaacctcatgccgggtccacgcgacggagcgaagaatatgagtctgtatggtctgctg
aatcactgcaagactcccgtgggcagtcggctgctcgcccagtggctcaagcagccgctc
atggatcttgccgagattgaaaagagacaacaacttgtcgaagcatttgtcaacgacacc
gagcttcgccaaactatgcaggaagagcatatgcgggccatccccgatttatacagactg
gcaaagcggttccagcggaaccaggccaatttggaagatgttgtccgagtttaccaggtt
gccatccgcctcccaggcttcattcgaagctttgagaatgtcatggacgagcaataccag
accccattagacgcacagtatacatcaaagcttcgcgggttttccgacagtctctcgaaa
ctggaggaaatggttgaaacgacagttgaccttgacgcgctcgacaaccacgagttcatc
atcaagcccgaatttgacgagagtctgcgtgtcattcggaaaaagctggacaagcttagg
tatgacatggacgtggaacatcgacgcgtggctcgcgatttgaaccaggatatggaaaag
aagctgttccttgaaaaccatcgggttcacgggtggtgctttcgattaacgcgcaatgag
gcaggctgcattcgcaacaaacgcgagtaccaggaatgctcgacgcaaaagaacggggtt
tatttcacgacgaagacaatgcaagaactcaggagggagcatgatcaactttccactaat
tataaccgaactcagtcgggtcttgttcaagaggttgtcaatgtggccgcttcctactgt
ccgatcctggagcagcttgccggtacactggcgcacttggatgtgattgtcagctttgca
catgtctcggtccatgcaccaacagcgtatactcgtcctcagatgcatcctcgcggaaca
ggcaatacggtactaaaagaggcgcgacatccatgcatggaaatgcaagacgacatttcc
ttcatcaccaacgatgtctccctcgtgcgcgacgagtcttctttcctcatcatcaccggg
cccaacatgggcggtaaatccacatatattcgacaaatcggagtcatcgccctcatggcc
cagatcggctgttttgtgccctgcacagaggctgagctgaccattttcgactgcatccta
gctcgtgtcggggccagcgattcccagctcaagggcgtctctacttttatggcggagatg
ctggagacgtcgaatattttgaaatcagctacgtccgagtccctgattatcatcgacgag
cttggtcgtggaaccagcacctatgacgggtttggtcttgcctgggctatctccgagcac
atcatcacggagattggatgctttggactgtttgccacgcatttccatgagctcacggct
ctagctgatcggtatcccaaatcagtgcagaacttgcatgtagtggcattcattggcgac
gataaagaacagcaagaaggcaagaagaaacgcgaagtcacgcttctgtatcgtgtcgaa
ccgggtgtctgtgaccagtcctttggcattcatgttgcagaactagtccggtttcccgag
aaagttgtcaacatggccaggcaaaaggcagaagaactcgaagactttacgtcggcgact
gcagagcctcagcagcagcagcaaaaccagaattctgcagccctcgatgcgtactcgcaa
gaggaagttgaagagggcagcgctctgctcaagtcgatgctactcaaatggaaagcagaa
atcgaggggccgggcaaggagagcatgactgcagaggagaagcgtaaagtgatgcgagac
ttggttgcggcagatgcagggttgcagacaaacaaggtgtttcagggtattaaaacgctg
taa
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