Talaromyces rugulosus: TRUGW13939_03413
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Entry
TRUGW13939_03413 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K14315
nucleoporin NDC1
Organism
trg
Talaromyces rugulosus
Pathway
trg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRUGW13939_03413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_03413
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRUGW13939_03413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
55990918
NCBI-ProteinID:
XP_035342490
UniProt:
A0A7H8QQZ5
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All DBs
Position
II:complement(join(2671509..2673132,2673190..2673457,2673528..2673660))
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AA seq
674 aa
AA seq
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MATTIPRPYRRILTSALHRRFVHASALSLLVNYVVAFAIGTKTSFLWSWFPLGACGLRTV
LLFIASLGVFFIRVAQMHAGPRTTVSPVATFRHIFPLDIVQTFAWYMFSAWWFSEVYLWS
VPTEADLGWVKLDRLTDRTTLNERSIYLHTYHMTLAVVQAAFHLYCDYDRLTIPVTKRTP
GSKDKRTHVVDPVLKRINGALVHCAVDAFKKAAAVTAASPFIYVLFLRRPAWNFSLFFAK
LFWNFSRAAAEPQNKMPPEFYNLFYRQIISGVGLVFLWQTANLFFTVFITQEPLKRGQPL
TTDAKDPTGSLINGLKAKKEFVKSYAFWELCFISQQFSDRRKAIFGDIDREGGSAWKQVL
EACIEHVSSVTGRINNYKNPPSTITAAPPPLKKEANVSYPQLQTLPHLTEAPKQEDIFAP
SPKANGFGDSFGARARSYGHSPDWTPAATAKAREALGQASNMLLSPERKKALLSLGGSDE
EQKLLPAPPPPPTPARSQSSFNISSIPFVAQFLRSPIGKPFRQTYAQRLCSIVFGTPYGQ
LSSIVDAIESIAQLLIASLTEDSFGQVQTDIPRVINLFTNTITTLESFISDDAANGGLDI
HWSDVTFPPSNKPEAQAKARRDVVDVDIVLSTLKSSLAELLAAFERYQREVGLQSKDIRL
AKAAVGLQEGDGNE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atggctactacgatacccagaccgtacaggcgcatcctgacctctgccttgcaccggaga
ttcgtccatgcttcggctctttcgctgctagtgaactacgtggtcgcattcgctattgga
acaaaaacatcattcctttggtcatggttcccactaggagcatgcggtctccgtaccgtc
cttcttttcattgcgagcttaggcgtctttttcattcgagttgctcagatgcacgccgga
ccccgaaccacagtctcgccagtcgcaacgtttcgccacattttcccgcttgatatcgtc
cagacgtttgcgtggtacatgttctctgcttggtggttcagcgaagtgtacttgtggtca
gtgcccactgaggctgatctgggatgggtaaaacttgaccgactcactgaccggacgact
ctcaacgaacgatcgatttatttacatacctatcatatgactctggcggtggtgcaggct
gcgttccatctgtattgcgactacgaccgcctcaccattcctgttaccaagcgcactcca
gggtcgaaagataagcgcacacatgtcgtggacccagttctgaagagaatcaatggtgcg
cttgttcattgtgccgttgacgcctttaaaaaggccgcagctgtcactgcagccagccct
tttatctacgttctatttctgaggcgccctgcgtggaacttttctcttttcttcgcaaag
ctattctggaatttttctcgagcagctgccgaaccacaaaacaagatgcctccggaattt
tataacctattctaccgacaaatcatctctggtgttggtcttgtgtttttgtggcaaacg
gccaatctgtttttcacggttttcatcacccaagaaccgttgaaacgaggacagccactt
accacagacgccaaagatccaaccggaagcttgataaacgggttgaaggcaaagaaagaa
tttgtcaagagctacgctttctgggaactgtgctttattagccagcaattttcagatcga
cgcaaggcaatctttggtgacattgaccgcgagggagggtcggcttggaagcaagtgcta
gaggcttgcattgaacatgtcagcagcgtgactggccggatcaacaattataaaaaccca
ccatctaccattacggcagctcctcctcctttgaagaaggaggcaaatgtgtcttaccct
cagcttcaaacactaccccatctaacagaagcccccaagcaagaagacatctttgcgcca
tcgccaaaggcaaacggcttcggagacagctttggagcaagagccaggtcatacggccac
tctcctgattggacgcctgctgcaacggccaaggcgcgagaagcccttggccaggcatcg
aatatgctcctcagccccgagaggaaaaaggcattattatcccttggaggttctgatgaa
gaacaaaaactccttcccgcaccaccaccaccgccaacaccagctcggtctcaatcttca
ttcaacatatcctcaatcccctttgtcgctcaattccttcgttcccccataggcaagccc
tttcgacagacatatgcccaacgcctgtgcagtattgtctttggtaccccttacggccaa
ctatcctcgatcgtcgacgccatcgaatccatcgcccagttgctgattgctagcttaacg
gaagattcctttggccaggtccagacagatatcccgcgcgtcatcaacctattcacaaac
acaatcaccaccttggaatctttcatttctgatgatgccgccaatggtggtctcgatatc
cactggtccgacgtcactttcccgccatcgaacaaacccgaagcccaggcaaaggcacgc
cgggatgtcgttgatgttgatattgtgctaagcacgctcaaatcctctctcgcagagtta
cttgccgcttttgagaggtatcagcgtgaagtcggtttgcagagcaaggatatcagactc
gccaaggcggcagtcggtttacaggaaggagatgggaacgaataa
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