Talaromyces rugulosus: TRUGW13939_04176
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Entry
TRUGW13939_04176 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trg03009
]
TRUGW13939_04176
Enzymes [BR:
trg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TRUGW13939_04176
Ribosome biogenesis [BR:
trg03009
]
Eukaryotic type
90S particles
Helicases
TRUGW13939_04176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
Helicase_C
DEAD
OB_NTP_bind
HA2_N
ResIII
AAA_22
AAA_19
HTH_NOL4_2nd
FtsK_SpoIIIE
AAA_23
Motif
Other DBs
NCBI-GeneID:
55991678
NCBI-ProteinID:
XP_035343246
UniProt:
A0A7H8QTE1
LinkDB
All DBs
Position
II:join(4968108..4968317,4968370..4971723)
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AA seq
1187 aa
AA seq
DB search
MPAFKPRDRKHRRRPQDGKAAAIPADTNAAEIVPASKAEKEAKRQQLRDQLRDQQPKMSS
KKKKRLDKYIETKLRKDENLELMKKLALAKVDLSEFRSIKNLSKKEKGHTDITIATPQAA
EAGLSGDESDELETGLSERNAAAPDIVEPIAPVQVGSGLKRPLELGEDGFPVLKKRKRTR
KAKPVIKELPWEGFDSGNEEAEEDEDDESDPEDASEDITSQSESEHSTSDEDGEDDEEED
DDDDSDQDDDEGEATSLRTRNSAFKSWATNRINEAVGFKPSADQPLSEQHALSAKLVVKE
GKVPRNTVYEEEPLPRELQPTTGDPNRKAFSVQVDRPEEIQEARLKLPVVGEEQKIMEAI
YNNSSIVIWGATGSGKTTQLPQFLFEAGYGHPDSPNPGMIAVTQPRRVAAVSMSKRVGDE
LGQYSNRVSYQIRFDTNVSSSTAIKFMTDGILLREIAKDFSLSKYSVIIIDEAHERSVNT
DILIGMASRIVDLRESMRKEDPSVKPLKLVIMSATLRISDFTQNAHLFRHGVPPLVQAEG
RQYPVTTHFARRTHRDYVEEAFRKVSRGHRKLPAGGMLVFLTGQNEIKQLSKRLKQAFKP
TQRGEDFQGKLKLSAADAPLETEDIELGDPDTGHQGEDDESDIDIVGLDDEDEDDQDFDL
GEESMASTTRVHVLPLYSQLPTKEQLKVFESPPEGSRLIVLATNVAETSLTIPGIKYVFD
CGRSKEKQYDLSTGVQTFQIGWISKASASQRAGRAGRTGPGHCYRMYSSAIYEADFADHT
EPEILRTPIEGVVLQMKSMGLHNVINFPFPTPPSRQGLTKAEKLLRNLGALKPDGQVTDL
GNKLSAYPLSPRYSKMLQIGHQHGCMPYVIALVSALAVGDLFVQDSQVDMTVSAAKTDKD
LVYTNADRLEDTAREQRRKDFFRARRLLSKHDDTSDALRYLSAICAYAYASEEESFCEQM
FLRAKGLKEASQLRSQLTDIVRTNNPGLLGSYEARLAEPAVKQIKALKQIVTAGFIDNVA
IRADMSPEPPEMQRKPRGATEVPYYTLFRAHEGRAEEIDEKAVYIHPSSILAHLTPKEMP
QYLVYSHLQQSTGSQASENTVPKVRMFPLAAPSGLQLSALAHGTPLLEYGKPVGKVEALG
SIPQRRQCFVVPSLVGEPGSTGWPLPAKKVVQIKDPKEGWIVEKFLT
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgccggctttcaagcctcgagatcgcaaacacaggcgtaggccgcaagatggcaaggca
gctgccatcccggccgacacaaatgccgccgaaatcgtgcccgcctccaaggcggaaaaa
gaggccaagcgacagcagctgagagatcagctacgggaccagcagcccaaaatgtcttcc
aagaagaagaagcgactggataaatatattgaaaccaaattgagaaaagacgaaaacttg
gaattgatgaaaaagctggccctggcgaaggtcgacctctccgaatttcgaagtataaaa
aatttgagcaaaaaagaaaaaggtcataccgacatcacaattgctacaccgcaggcagca
gaagcaggtctttcgggcgatgaatctgacgagttggagactggtttgagtgagagaaac
gccgcagcgcctgacatcgtggaacccatcgctccggtgcaggttggaagtggtttgaaa
cggcctcttgaactcggggaagacggattcccagttcttaagaagagaaagaggacgcgc
aaggctaagccagtgatcaaagagcttccttgggaaggctttgactctggtaacgaggaa
gcagaagaggatgaggacgacgagtctgatcccgaggatgcatctgaagatatcacttca
caaagtgagagtgaacatagcactagcgacgaggatggcgaggatgacgaggaagaagat
gatgacgatgactcggaccaagatgacgatgaaggagaagcaactagcctccgcaccagg
aattctgcattcaagtcatgggccacaaacagaatcaacgaagctgtggggtttaaacct
agcgccgaccagcccctttcagaacaacacgcattgtctgccaaattagtggtgaaagaa
ggcaaggttcctaggaataccgtgtacgaagaagagccacttccccgagagctccaaccc
accacaggagacccgaaccgcaaggcatttagtgtccaggtagatcgaccagaagaaatc
caagaagcccgactgaagctccccgtggtaggcgaagaacaaaaaatcatggaagctatt
tacaacaactcatccattgtcatttggggagcgactggaagtggtaaaacaacacagctg
ccacaattcctcttcgaagctggctacggtcacccggacagcccaaatccaggtatgata
gccgtcactcaaccgcgacgagttgcagcggtgagcatgtcgaagcgtgtgggcgacgag
ttgggacagtattccaaccgagtatcctaccaaatccggtttgataccaatgtctccagc
agcactgcaatcaaattcatgactgatggtattttgctacgcgaaatcgcaaaggatttt
tctttgagtaaatactcggtaatcatcatcgatgaagcccacgaacggagtgtcaatacg
gatattctgataggcatggccagtcgtatcgttgatctccgggaatccatgcgcaaagaa
gatccttcggtcaagccgttgaaactggtgatcatgtcggctactttgcgaatatccgat
ttcacccagaatgcacatcttttccgacatggtgtcccaccactagtacaagcagaaggc
cgacaataccctgtcaccacacattttgcccgacgcactcatcgagactatgttgaagag
gcattccgcaaggtatcgagaggacaccgcaaactcccagctgggggcatgcttgtcttc
ctcactggccagaatgagattaaacagctatctaagcgcctaaagcaagccttcaaacca
acacaacgcggtgaggactttcaagggaaactgaaactatcagcggcagatgctccactc
gaaaccgaggacattgagctgggcgacccagataccgggcaccaaggcgaggacgatgaa
agcgatattgatatcgttggtttggatgatgaggatgaggatgaccaagatttcgatcta
ggcgaggaaagcatggcatctactacgcgtgtccatgtgctgccgttatattcccaactg
cccacgaaagagcagttgaaagtcttcgagtcccctccagaaggatcacgactaatagtc
ttggctacaaacgttgctgaaactagtttgactatcccgggcatcaagtatgttttcgac
tgcggacggtcaaaggaaaaacaatacgacctttccacaggtgtccagacgttccagatt
ggctggataagcaaagccagtgcaagccagagagctggtcgtgctggtcgaacaggtccc
gggcactgttacagaatgtactcaagtgcaatctacgaggcagattttgccgaccataca
gagcctgaaatcctcaggacgccgattgaaggggttgtcctacaaatgaagagcatgggt
ctgcacaatgtcatcaactttccattccctactcctccaagtcgacagggcttgacaaag
gcagaaaagcttcttaggaacctcggggcgctcaagcctgacggtcaagtcaccgacttg
gggaataaattatcggcctatccgctgtcacccaggtatagcaagatgcttcaaatcggc
caccaacacggttgcatgccatatgtgattgcattggtatcggcgcttgctgtgggcgat
ctctttgtccaagacagtcaggtcgatatgacagtgtcggcagccaaaacggacaaggat
ttagtgtacacaaacgcagacagattagaggataccgctcgagagcagcgtcgcaaagac
ttcttccgggcccggcgtctactcagcaagcacgacgatacctctgacgccctgagatat
ttatctgccatctgcgcatacgcgtatgcatctgaggaagagtccttctgcgagcaaatg
ttccttcgtgcaaaggggctcaaagaagcctcgcaactccggagccaactcacagacatt
gtacgcaccaataaccctggacttctcggctcatacgaggctcgcctcgcggagccggcg
gtgaaacagatcaaagccctaaagcaaatcgtcaccgctgggtttattgacaatgtcgca
atcagggctgatatgtcacccgagcctccagaaatgcagcgcaaacctcgaggcgccacc
gaagtcccttactatacccttttccgagctcacgagggccgggcagaagaaatcgatgag
aaagcagtgtatatacatccatcatcgattctcgcacacctaacgcccaaggagatgccg
cagtatctagtttattcgcatcttcagcaatcaactggctctcaggcgtcggaaaatacc
gtgcccaaggttcgaatgttccccttagctgcgccaagtggactgcagctgtcggctctg
gcacacggaacaccgctgttggaatacggtaagccggttggcaaggtcgaggctctagga
agcatccctcagcgtcgccagtgctttgttgttccttcgctggttggagagccgggtagc
acaggatggccactgccagcgaaaaaagttgtacagatcaaggatccgaaagagggctgg
attgtggaaaagttccttacatga
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