Talaromyces rugulosus: TRUGW13939_04625
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Entry
TRUGW13939_04625 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K03257
translation initiation factor 4A
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_04625
03012 Translation factors [BR:
trg03012
]
TRUGW13939_04625
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trg04147
]
TRUGW13939_04625
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
TRUGW13939_04625
mRNA cycle factors
Stress granule specific factors
TRUGW13939_04625
Translation factors [BR:
trg03012
]
Eukaryotic type
Initiation factors
eIF-4
TRUGW13939_04625
Exosome [BR:
trg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
TRUGW13939_04625
Exosomal proteins of bladder cancer cells
TRUGW13939_04625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
AAA_30
CMS1
fragilysinNterm
Gp6_2nd
Motif
Other DBs
NCBI-GeneID:
55992126
NCBI-ProteinID:
XP_035343689
UniProt:
A0A7H8QVH8
LinkDB
All DBs
Position
II:join(6200275..6200368,6200465..6200539,6200614..6200682,6200742..6201100,6201150..6201792,6201846..6201856)
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AA seq
416 aa
AA seq
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MASKGGLEEVPEGMHPLSGFSFFIERAKVDYRQIESNYDEVTDSFDSMNLKAELLRGVYA
YGFERPSAIQQRAIMPVIKGNDVIAQAQSGTGKTATFSISALQKLDTSLKACQALILAPT
RELAQQIQKVVVAIGDFMSIECHACIGGTNVREDMKALQDGPQVVVGTPGRVQDMIQRRV
LRTDNIKMFVLDEADEMLSRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRD
PVRILVKKDELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTD
KLTARDFTVSAMHGDMEQSQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLP
ANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYNTQIEEMPMNVADLI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaagggcggcttggaggaggtccctgagggtatgcatcccctatctggcttt
tcattctttatcgagcgggcaaaagtcgattatcgacagatcgagtccaactatgacgag
gtcaccgactccttcgactccatgaacctcaaggccgagcttcttcgcggtgtctacgcc
tacggtttcgagcgtccttccgctatccagcagcgtgccatcatgcccgtcatcaagggt
aacgatgtcatcgcccaggcccaatccggtaccggtaagaccgctaccttctccatctct
gctctccagaagctcgacactagcctcaaggcttgccaggccctgatcctagccccaacc
cgtgagttggcccagcagatccagaaggtcgtcgtcgccattggtgacttcatgagcatt
gagtgccacgcttgcattggtggtaccaacgttcgtgaggacatgaaggccctccaggac
ggcccccaggtcgtcgtcggtacccccggccgtgtccaggacatgatccagcgccgtgtc
ctccgcaccgacaacatcaagatgttcgtccttgacgaggccgatgagatgctttctcgt
ggtttcaccgagcaaatctacgacatcttccagctcctccctcaatccacccaggttgtc
cttctctcggctaccatgccccaggacgtcctcgaggtcaccaccaagttcatgcgcgac
cccgtccgtatcctcgtcaagaaggacgagcttaccctggaaggtatcaagcagttctac
attgctgttgagaaggaggagtggaagcttgacaccctctccgacttgtacgagaccgtt
accatcactcaggccgtcatcttctgcaacacccgccgcaaggtcgactggctcaccgac
aagctcactgcccgtgacttcaccgtctccgccatgcacggagatatggagcagtcccag
cgtgatgttatcatgaaggagttccgttccggttcttctcgtgtcctgatcgccactgac
ctgttggcccgtggtatcgatgtccagcaggtctccctggtcatcaactacgatctcccc
gccaaccgtgaaaactacattcaccgtatcggtcgtggtggtcgtttcggtcgtaagggt
gtcgccatcaacttcgtcaccgctgacgacgtccgtatgatgcgtgaaatcgagcagttc
tacaacacccagattgaagaaatgcccatgaacgttgctgaccttatctaa
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