Talaromyces rugulosus: TRUGW13939_04628
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Entry
TRUGW13939_04628 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
trg
Talaromyces rugulosus
Pathway
trg03013
Nucleocytoplasmic transport
trg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRUGW13939_04628
03015 mRNA surveillance pathway
TRUGW13939_04628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_04628
03041 Spliceosome [BR:
trg03041
]
TRUGW13939_04628
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
TRUGW13939_04628
Spliceosome [BR:
trg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
TRUGW13939_04628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
55992129
NCBI-ProteinID:
XP_035343692
UniProt:
A0A7H8QU43
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All DBs
Position
II:complement(join(6209562..6210260,6210327..6210491,6210550..6210640,6210705..6210808))
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AA seq
352 aa
AA seq
DB search
MASTVDAKLLRRTKFPPEFSKKVDMTKVNLEVMKKWIGGKLAVILGDDDDVVIELCFNLL
EGTRFPDIKSLQIQLTGFLDKETPQFCQELWNLCLSAQSSPQGVPKELLEAKKLELRQEK
PRKLPKKRVDVKNKSKTERGNWKAFARGRGLTETGTSAGGEEVVGTMIAGARDLLVVGAP
SIVGVLRGVNLTHMYHEAAAGVAVDSLDHTLVRYLAHHLLPDHLPAVHTARKDVIADPHE
PTAGPLPPEVDEGTQETGGEAHLTVMIEIDLPPAVIRHAHLVPEEHDEETHHPPADHVHH
HLEPTRERILGRGLDSLDGATVRGDRYLLTHGMVQREIQRLARPGTLKMTAG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaccgtcgatgcaaagctgcttcggcggacgaaattcccaccggaattcagt
aaaaaggtggacatgaccaaggtcaacctcgaagtcatgaaaaaatggattggcggaaag
ctcgcagtgatacttggtgacgatgatgacgtcgtcattgagctatgtttcaatctcttg
gagggcacccgatttcccgatatcaagtctcttcagatccagcttaccggcttcttggac
aaagaaacccctcaattttgccaggaactatggaacctctgcctaagcgcccaatccagc
ccgcaaggagtacctaaagaattattggaggcaaagaagctggagctgaggcaagaaaag
ccgagaaagctgccgaagaagcgcgtcgacgtaaagaacaagagcaagaccgagagaggg
aattggaaagcattcgccagagggagaggtttgaccgaaacaggaacttccgcgggggga
gaggaagtggtcgggactatgatcgccggagctcgcgatctcctcgtcgtcggagccccg
agcatcgtgggggtccttcgcggcgtgaatttgactcatatgtaccacgaggcggcggcg
ggcgtggccgtcgacagtctagaccacactctcgttcgatatctcgctcaccatcttctt
ccagatcacctccccgccgttcataccgctcggaaagacgtgatcgcagacccccacgaa
cctacagcaggtccccttccccccgaggtggacgagggcacacaagaaacaggcggcgaa
gcccatcttacggtgatgatcgagatagacctgccacccgcagtgattcgtcacgctcac
ctagtcccagaagaacacgacgaagaaacacatcatcccccagccgatcacgttcaccac
cacctagaacccacaagagaaaggattctcggtcgaggtctcgacagcctagacggggcg
accgtgagaggcgaccggtatctgttgactcacgggatggtgcaaagggagattcaaaga
ctggcaagacccggcactctaaagatgaccgccggttga
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