Talaromyces rugulosus: TRUGW13939_05058
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Entry
TRUGW13939_05058 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K12587
exosome complex component MTR3
Organism
trg
Talaromyces rugulosus
Pathway
trg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRUGW13939_05058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_05058
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TRUGW13939_05058
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
55992556
NCBI-ProteinID:
XP_035344116
UniProt:
A0A7H8QW94
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Position
III:complement(join(576184..577019,577074..577212))
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AA seq
324 aa
AA seq
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MADRRRNNGPPNGTRAPVFASLLRSATGEVAQRPQRTRKSDELRKIFLTTGLVPTASGSS
YLEIKPARLPTGKSLIAPSTSLKIACTVHGPRPLPRSANYSPNLVLTTHVKYAPFAHRRR
KGHIRDASERDLGVHLETAIRGAIIAERWPKSALDVTITVLEAEDDRWWGDASGATDASW
GTMNVLAGCITAAAAAIADAKIDCLDLVSGGVAAIVEDNEAQKDGKPTRQLVLDPDPSEH
KNITAACVVACLPSRDEITELWLKGDTYLGGDQSSGHEALIDGSVDAARGVHTVLCAAVT
ESGERLLKQTINTPVADTDAEMKT
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggctgatagaagaagaaacaatggccctcccaacggcactcgggcgccggtttttgcc
tcattgctgcgctccgcaacgggcgaagtagcacagagaccgcaaaggacgaggaaatct
gacgagctacgcaagatattcttgacaacaggcctagtccctacagctagcgggtcgtcg
tacctggaaatcaagcctgccagactaccgaccggcaagtcattgattgcaccttcgact
tcgttgaaaatcgcatgtacagtccatggccctcgccctctgccacgctcagcaaactat
tcgcccaacctcgtactcacaacacacgtgaaatacgcaccatttgctcaccgacgacga
aagggacacattcgtgatgcgagcgagcgagatctcggagtccatcttgagactgccatc
cggggcgctatcatcgcagaacgctggccaaaaagtgcgttggatgttacaatcaccgtt
cttgaagcagaagacgaccgatggtggggtgatgcttctggcgcaacggatgcatcctgg
ggaaccatgaacgtgctcgcggggtgtattacggctgctgctgctgcgatcgctgatgca
aaaattgactgtctcgacttggtctcgggcggcgtagcagctattgtggaggataacgaa
gcgcaaaaagatggaaagccgaccaggcagcttgtgttagacccagatccgtcggagcac
aagaatataaccgctgcttgcgtggttgcctgcttgcccagccgggatgagattacggag
ctatggctgaaaggggatacatatttaggaggagaccagagttctggacatgaagccctc
atcgatggttctgttgatgcagcaagaggtgtccacaccgtgctttgtgcagctgtcaca
gagtctggggagcgcttactcaaacagaccataaacaccccagtagctgatacagatgcc
gagatgaagacgtga
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