Talaromyces rugulosus: TRUGW13939_05233
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Entry
TRUGW13939_05233 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trg03041
]
TRUGW13939_05233
03009 Ribosome biogenesis [BR:
trg03009
]
TRUGW13939_05233
Spliceosome [BR:
trg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
TRUGW13939_05233
Ribosome biogenesis [BR:
trg03009
]
Eukaryotic type
90S particles
RNase
TRUGW13939_05233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Motif
Other DBs
NCBI-GeneID:
55992731
NCBI-ProteinID:
XP_035344290
LinkDB
All DBs
Position
III:complement(join(1107577..1109622,1109695..1109796,1109853..1109915))
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AA seq
736 aa
AA seq
DB search
MSQEEIHDTAKPGLRVALEGCGHGKLHDIYAKVAETAASKGWDSVDLLIIGGDFQSVRNA
NDLTGMSVPIKYREIGDFHEYYSGKRVAPYLTLFIGGNHEASNYLRELYYGGWVAPNIYY
VGAANVLRFGPLRIAGLSGIWKGYDYRKPHFERLPYNSDDVKSIYHVREIDARKLLQVRT
QVDVGLSHDWPREVEKFGDYNRLFRIKRGFREDSESGKLGNFAAKKILDRLRPRYWFSAH
LHVRYSATIPHGEYVYQTNGQSTGTTNKRLQTSSPHGLDGAIVSIPSDVANGTNDKDHKI
GGVPLAKKKSPPAPFLTQIKGFVPPKSTAEAHLAWGQFSKVAAEQDALDAKKFLENAPRP
GETYSLDADFSQTWRKIKPGDLDRKVTNVQKAEETKSAVKNADEIDLDLDDDNSSANTPE
TEAEKGKAAIKNTDEIDLDDENSSANTPETEAEKGKAAIKNTDEVDLDLDSGSEGGANIE
VKKNIVHIQNNTDQAEPSRDENEVSGDLREQLPEGFKRQRQQSASYGPLPDEISNKTTEF
LALGKCKSEFACSEYLELFEIAPASEEGDAQGPYTLQYDKEWLAITRVFADSLALGDPGF
QISPDLGDEVYKPKILAEEAWVQENIVDKGRMEVPQNFEITAPVYDPAVSINTTDMPPEY
NNNQTAAFCELVGIENKFHLTPEEQERRRALVPRAARNFHGNNRYRIPRHGRHNQSGRGG
GKRRGGYNGGSPRQFS
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaagaaatccacgacactgctaaacctggattgcgagtcgctctagaaggc
tgcggccatgggaaattgcatgacatatatgccaaagttgccgaaactgccgcctccaaa
ggatgggatagcgtggacttgctcatcattggtggcgatttccagtcggttcggaatgca
aatgacttgactggaatgtcagtgcctatcaagtaccgagaaatcggagacttccacgag
tattacagtggcaagcgtgttgcaccatatctcaccttgttcatcggcggaaatcacgaa
gctagcaactacctgcgagagctctactatggcggttgggtagctcccaacatctactac
gtgggcgccgccaacgtgcttcgatttgggccattacgtattgctggactttccgggatt
tggaaaggctacgactatagaaagccacattttgaacgtctcccgtataactccgacgat
gtgaaatccatctatcacgttcgagaaatcgacgcacgaaagctcttgcaggttcgaaca
caggtcgatgtaggcctttcgcatgactggccacgagaagtggagaagtttggagactac
aatcgccttttcagaatcaagcgcggttttcgagaggattcagagtccggcaaactggga
aacttcgctgccaaaaagatactggatagactgcgcccacgctactggttctcagctcat
ctgcatgtcaggtattccgcaactatcccacatggtgaatacgtctaccaaacaaatggc
caatcaacggggactacaaacaaacgtcttcagacatcatccccacatggccttgacgga
gcgatcgtttctattccatctgacgtggcaaacgggaccaatgacaaagaccacaaaata
ggaggagtgcctctagcaaaaaagaagagtcctcctgcaccttttttgacgcaaatcaag
ggattcgtacccccaaaaagcacggcagaagcccatttagcctggggccaattctcaaag
gttgcagctgagcaagatgccttggatgcaaagaaattccttgagaacgcacctcgtccg
ggagagacctattcactggatgcggatttctctcaaacatggagaaagattaaacctggc
gatctagacagaaaagttaccaatgtccaaaaggccgaggaaacgaagagtgctgtcaag
aacgccgatgaaatcgatcttgacctcgatgacgataattcgagtgccaacacccccgag
actgaagccgagaagggtaaagctgctatcaaaaacacggacgagattgacctcgatgac
gaaaattcgagtgccaacacccccgagactgaagccgagaagggcaaagctgctatcaaa
aacacggacgaggttgacctcgatcttgatagcggctcagaaggcggtgcaaacatagag
gttaaaaaaaacatagtccatatccaaaataacaccgaccaagctgagcctagccgtgac
gaaaatgaggtatctggtgacctgcgagagcagctccctgaagggttcaagcgccagcgt
caacaatcagcttcgtacggccctctgcccgacgaaatctcgaataaaaccactgagttt
ttagcattgggcaagtgcaaaagcgagtttgcgtgcagtgagtacctcgagctttttgaa
atagccccagcctcggaagaaggtgatgcgcagggtccgtatactcttcaatacgacaag
gagtggcttgcaattactcgtgtctttgcagattcgctggcgctcggcgaccctggtttc
caaatctcccctgacctgggcgatgaggtttacaagcctaagatcctcgccgaagaggct
tgggtacaagaaaacatcgtggacaagggtagaatggaggtgccacaaaatttcgagatc
acagccccggtttacgatccagcagtctcaatcaacaccacagacatgccaccagagtac
aacaacaaccaaacggcagcattctgtgagcttgttggcattgagaacaagtttcacctg
actcctgaggaacaagaacggcgtcgtgccctcgtgcctcgagctgcgcggaatttccat
gggaacaaccgctaccgtattccccgtcacggacgccacaaccaatctggtcgaggtggt
ggtaaacgacgcggaggttataacggcggctctcctcgtcagttctcttaa
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