Talaromyces rugulosus: TRUGW13939_05260
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Entry
TRUGW13939_05260 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K14307
nucleoporin p58/p45
Organism
trg
Talaromyces rugulosus
Pathway
trg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRUGW13939_05260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_05260
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRUGW13939_05260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
Nup49_C
Neur_chan_memb
AMIN
Motif
Other DBs
NCBI-GeneID:
55992758
NCBI-ProteinID:
XP_035344317
UniProt:
A0A7H8QVW6
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All DBs
Position
III:complement(join(1164316..1165279,1165331..1165864,1166069..1166142))
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AA seq
523 aa
AA seq
DB search
MFGAKSAAPAAGGLSINTSSANSLFSNTAAPTSQPATAGSLFGNQQQKPAGSLFGNTATP
NNTQQSGGSLFGGQGSNTTGSTQQSGMATGSLFGAAPATSQPQGGGLFGNTAAKPAATGP
SLFGNTNTQQTGAATTGGGLFGNTNTQQQQSGTTGGGLFGNTNTAQTGTGGASLFGGTQG
AAAPTQNKSLFGAAPATGGTSLFGGTQNAGQQQQQQQQQQQKPTLSIFGAQNATQQQPQQ
PTSAPGTVVQGVRVDASNLLPTTKFESCADEIKRTIEQIDTYVLSQLNMCNEVTDLLPMI
AQQGSTIPNDVSFVEGKLETMQHALENDARDINHVRNMVTRNAAEAQVAFRAIDNLKLPL
QYQSSSGGWWSVPEQQLSERQSLRSSIKNRKSTLALPHGVEGDSSTTDSIDGVPVNLVEY
FSHRSDEMSTVLDGYKKNLKEIEDHLYGVESSLSRQINEFTASRNRDNTPNGSTAKSQLA
DLAAALGDVEAGILGVASRLGAAKEEVQELAMGPPTLGLGRLG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcgccaaatccgctgctccagccgctggcgggctctccatcaacacatcatcc
gccaattcgttattctccaacacagcagctcctacatcccagccagcaacggcagggagt
ctcttcggaaaccagcagcagaaacccgccgggagcttgtttggaaacacggcaacccca
aacaacacgcaacagagcggcggaagcctgtttggtggccaaggctcgaatacgaccggt
agcacgcagcaaagtggaatggcaactggaagtctgtttggggcggccccagcgacatcg
caaccgcagggtggagggctgttcggaaatacagccgcaaagcctgcagcaacaggcccg
agcttgtttggcaacacaaacacacagcagaccggagcagcaacaaccggaggagggctt
tttgggaataccaacacccagcagcaacaaagtggcaccaccggaggtggtctgtttggc
aataccaacacagcccaaacaggcactgggggcgccagcctctttggtggaactcaagga
gcggcagctccgacacagaacaaatcgctcttcggcgcagccccggctaccggtggcacg
tctcttttcggtggaacccaaaatgccggccagcagcagcaacaacagcagcagcagcag
caaaaacctacactatctatatttggagctcaaaacgcgacgcagcaacaaccacagcaa
ccgacttctgctccagggacggttgttcaaggggttagggtcgacgccagcaatttactt
ccgacaacgaaatttgaaagctgcgccgacgaaatcaaaagaaccattgagcagattgat
acgtacgtgctaagccaattaaatatgtgcaatgaggtcacagaccttttgcctatgatt
gcccagcaagggagtacgatacccaatgatgtcagcttcgtcgaaggcaagctcgaaact
atgcagcatgcgctcgagaacgatgctcgggatatcaaccatgttcgcaacatggtgacg
cggaatgccgccgaggctcaggtcgccttccgggcaatcgacaatctcaaactcccgctg
cagtaccaatcttcaagcggaggatggtggtcagttcccgaacaacagctgtctgagcgc
cagtccctgcggtcatcaatcaagaaccgaaaaagtacactcgcattaccacatggcgtc
gaaggggattcttctacgactgactcgatcgacggtgtgcccgtcaacctggtcgagtat
ttctcacaccggtccgatgagatgtcgaccgttctcgacggctacaagaagaacctaaag
gaaatcgaagaccatctgtatggtgtcgagagctccctgagccggcagatcaacgagttc
acggcgtcgcgcaaccgagacaacacgcccaatggcagcactgccaagtcacaactggcg
gaccttgcagcagctcttggcgatgtcgaggctggaattttgggggttgcaagccgactg
ggggccgcaaaggaagaggtccaggagctcgctatggggccaccgaccttgggtcttggt
cgtcttggctaa
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