Talaromyces rugulosus: TRUGW13939_05304
Help
Entry
TRUGW13939_05304 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K14569
ribosome biogenesis protein BMS1
Organism
trg
Talaromyces rugulosus
Pathway
trg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TRUGW13939_05304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trg03009
]
TRUGW13939_05304
Ribosome biogenesis [BR:
trg03009
]
Eukaryotic type
90S particles
GTPase
TRUGW13939_05304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GRDP-like
GTP_EFTU
AAA_22
Tsr1_G-like
AAA_16
AAA_33
MMR_HSR1
NB-ARC
nSTAND3
AAA
AAA_19
PduV-EutP
TsaE
NACHT
ABC_tran
DO-GTPase2
AAA_7
KAP_NTPase
AAA_17
AAA_30
RNA_helicase
AAA_5
ATPase_2
NTPase_1
AAA_24
AAA_14
cobW
Wzy_C_2
RsgA_GTPase
Rad17
ATP_bind_1
SRP54
MobB
AAA_11
Motif
Other DBs
NCBI-GeneID:
55992802
NCBI-ProteinID:
XP_035344361
UniProt:
A0A7H8QZM8
LinkDB
All DBs
Position
III:complement(join(1307899..1311345,1311421..1311491,1311606..1311663,1312708..1313885,1313943..1314296,1314357..1314867))
Genome browser
AA seq
1872 aa
AA seq
DB search
MASERLPGNISKKGNNGFALSKAEDGPPPYDIHRVGQYFSNIPALRFPDLGPATDKTVTK
DQCILHLKLLAAFADLRSTVSTVDGLFGIHDSQADKFGGGDDMAKCRALIRIREKRWEVY
TSRAVDRYVEWWTKIVPAGQLPTVSQIIQLQYSIIGSNPLPWSANNLPPLDVLMVWHAHM
LNPRAYLEDCIRVSKMALWNTDFPWQLIDDAIDTQTFNYNPSDEAIRTFTGITGRLWDNL
DESEEKTLECLMCSRQLNVPWTTGEIGHSPDYAFEECTGYADSGFEAYYVEDLLAFDHPM
PGTYLNLNGVPSQLQELSFPNALIKAGQRTVYNCIEPGGTVNDMNGVRRLLEAQMGNLYL
IKTISGDGGKVRLTKIQKISIRRMMSHYWENSSMFGLDLVGAVIRQGTFIQKMDNLDWIH
SPALSTTMERLILKYMTFLAIMFSNPTKMAVPTLDVDLAWHTHQMSAPRYYYYTTNRSVR
SGPRTFTNHDDKVDEGKLSDAFEWTSNEYKVITNGEIYSECTCWYCEATREPILYSGSTM
VSSTTRHARTLAKNLHDDPTISSEPDKNPHISTHNAVRSRKVEAPEDVRTMRLRGLWDKA
CRRAQKRREKEGSAGEGNNTLTMDAYHPMIWGYPYYLPLYSPYMVDPSISTGPYPSNPGW
MNANVGGYGNCATGTCTNAVAMEDQKNRAHHKGKEKKKYEGQNPKAFAFSNPGKGRRQAV
RSHELKEKRLHVPLVDRLPEEAPPIVVTVVGPPGVGKTTLIKSLVKRYSKQTLSSPTGPL
TVVTSKRRRLTFLECPSDSLASMVDVAKIADIVLLMIDGNYGFEMETMEFLNVLASSGMP
GNVFGILTHLDLFKKQSTLKAAKKRLKHRFWSELYQGAKLFYLSGVLNGRYPDREIHNLS
RFLSVMKNPRPLIWRNSHPYALADRFLDITPPTEIEEDEKCDRTIALYGYLRGTNFPAQG
ARVHVPGVGDLTVSAIEGLPDPCPTPFMDQQVAKATGKGARRRLGEKQKLLFAPMSDVGG
VLIDKDAVYINVKSATFNRDEDEEDDENRGLGEQLVMGLQGERKLLGEADVGLRLFKDGD
TISREDEEVGTGRKHKRSVRFMDDGVGHVSEEEVDDEGFESGNDDELDGGVEGDSADDIS
DKEGDDEVQTPADFTASFREKQNGQSKNAEDDIAFADSDSDLGSISSVEDQELEDGSDED
EDEDEDFEVDDDDDNEGALRWKDNMIENAKALHGKRPSYRVTDLSRMLYDESITPAEVIS
RWKGEDQAGGDDVDGEEEDDFFKKADIENEGEWEDRTIPVFDYEELENKWSEEDAVEALR
RRFVSAKLSEGADSDEDEDEDEGDDEGDGAFEDLETGEVFNGFDEKLGEDADKSEAEGDE
AEGSVNLEAEREQNAKKKEELRLRFEEEDREGFANAKNGDRNEDEGEHEFGEDDWYDAQK
AQLQKQQDINRAEFETLDAASRARAEGYRAGTYARIVLEKVPCEFSTKFNPRFPVIVGGL
APTEERFGYVQVRIKRHRWHKKILKSGDPLIFSLGWRRFQSLPMYSISDSRTRNRMLKYT
PEHMHCFGTFYGPLVAPNTGFCCVQSFSNKLPGFRIAATGVVLNVDESTEIVKKLKLTGY
PYKIFRNTAFIRDMFGTSLEIAKFEGASIRTVSGIRGQVKRALSKPDGHFRATFEDKILM
SDIVFLRAWYPIKPHRFYNPVTNLLDLDESASGENGWQRMRLTGEVRKAEGIATPLQKNS
QYSTIERPTRHFNPLRVPRQLAKELPYKSQITQMRPRKEQTYVQKRAVVLGGEEKKARDL
MQKLSTMHNDKRAKRAAAQEERKQVYRAKVAENAEKRAEREKREKKDYWRQEGKKRKHTD
SEGGGRGGKKRR
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgaacggcttccaggaaatatttctaaaaagggcaataatggattcgcatta
agcaaagcggaagatggtcctccgccatacgatatacaccgggttggacaatatttcagt
aacatcccggctctcaggttccccgatcttgggccagccacagacaagaccgtcaccaag
gaccaatgtattttacacctgaagctacttgcagcattcgccgacttgcgctccacggtc
tccaccgttgacgggctatttgggatacatgactcccaggcagacaagtttggtggtggt
gacgacatggccaaatgcagggctttgatacgtatcagagagaagcgctgggaagtgtac
acctcccgagcagtggatcgctacgtggaatggtggacaaagattgtgcccgctggacaa
ctccctactgtttcccagattatacaacttcaatattctattatagggtccaacccactg
ccctggtcggcaaataatttgccccctcttgatgtcctcatggtttggcatgctcacatg
ctcaaccctcgtgcttacctagaagactgcatccgagtctccaagatggccttgtggaac
accgactttccctggcagttaattgacgacgccatagatactcaaaccttcaactataac
cccagtgacgaagcaataaggactttcactgggataactgggcgtctttgggataatctg
gatgagtccgaagagaagactctcgagtgtcttatgtgttcgcgccaattgaatgtcccc
tggacaacaggagagattggacattcgccagattatgcatttgaagagtgcactggatat
gccgacagtggctttgaggcttactatgtggaagacctgctagcctttgaccatccaatg
cccggaacgtatctgaatctaaatggtgttccgagccaacttcaggagctttcattccca
aacgctctaatcaaggctggtcaacgtacagtttacaattgcatcgaacccggcggaacc
gtgaacgacatgaatggtgtgcgacgtcttcttgaagcacaaatgggcaacttgtacctt
atcaaaactatcagtggcgacggcggaaaagtcagattgacaaaaattcaaaaaataagt
atacgacgcatgatgtcccattactgggagaacagttctatgttcggcctggacctcgtc
ggggcagttatccggcagggtacatttatacaaaaaatggataatctcgactggatacac
tcaccagctctttcaacgacgatggaacgattgattctcaaatacatgacttttctcgca
atcatgttcagtaaccccactaaaatggctgtaccaacattagatgttgatcttgcatgg
cacacacatcaaatgtctgcgcctcgatactactactatacaacaaaccgatcagtccga
tccggaccccggacattcacaaaccacgacgataaagtcgacgaaggaaagctctccgat
gcattcgaatggaccagcaacgaatacaaagtcatcaccaatggcgagatatacagtgaa
tgtacctgctggtactgtgaggccacacgggaacccattttatactccggtagcaccatg
gtttcatcaacaacaagacatgcgcgcacactagccaaaaatttacatgacgacccaaca
atctcctcagagccggataaaaacccacatatttctacacataatgctgtgcgctcccgc
aaagtggaggccccagaggacgtaagaacgatgcgtctccgaggactgtgggataaggcc
tgtcgtcgagcacagaaacgacgcgagaaggagggcagcgccggtgaaggtaacaacacc
ttaacgatggatgcttatcatccgatgatatggggctatccctattatcttccactgtat
tcgccatacatggtggacccaagcattagtactggcccttatcccagcaacccgggctgg
atgaatgccaatgttgggggatacggtaactgtgctacggggacatgtaccaatgctgtc
gcgatggaggatcagaaaaatcgcgcccatcacaagggcaaggagaagaagaaatatgaa
ggtcaaaaccctaaggcgttcgctttctcgaaccctggaaaaggtagaagacaagctgtg
aggtctcacgagctcaaagaaaagcgccttcatgtgcccctcgtcgaccgtctcccagag
gaagccccgccaattgtggttacagtcgttggacccccgggagtgggcaaaacaactctg
atcaagtcattggttaaacgatactcgaagcaaaccctcagctctccaacagggcctctt
acagttgtcacatccaagcgccggcgcctcacgtttttggaatgcccctcagattccctg
gccagtatggtcgatgtcgccaagattgcggatatcgtcttgctcatgatcgacggcaat
tatggcttcgagatggagacaatggagtttctcaacgtgttggcgtcaagtgggatgccg
ggaaatgtctttggcattttgacccacctcgatctattcaaaaagcagagcacattaaaa
gccgcaaagaagcgactaaagcatcgtttttggagcgagctttaccagggcgccaaactc
ttctatctgtccggagtgttgaatggtcggtatccagaccgtgaaatacacaacctctcg
cgctttctttccgttatgaaaaacccacgtcctctcatctggcgcaactcacatccttac
gctcttgccgatcgcttcttagatattacaccacctactgaaattgaagaagacgaaaaa
tgtgaccgcacaatagcgctgtatggatacctacgaggcacgaattttcccgctcagggt
gcccgcgtccacgttcctggtgttggagaccttacagtttctgccatcgaagggctacct
gacccttgtcctacgccttttatggatcaacaagttgcaaaagcaacaggtaaaggtgcc
cggagaagactaggagaaaagcagaaactactgttcgcccccatgtccgacgtcggtggt
gtcctgatagacaaagatgccgtgtacatcaacgtcaaatccgccacttttaatcgagac
gaagatgaagaagatgatgagaatcggggactaggagagcagctcgtcatgggtctgcaa
ggtgaacggaaactgcttggagaagctgatgtcggcctccgacttttcaaagacggagac
acaatctcaagagaagacgaagaagtcggtacaggcaggaagcataagcgatcagttcgt
ttcatggacgatggcgttggacatgtttccgaggaggaggtcgacgatgaaggatttgaa
agcggaaatgacgacgaattagatggtggagtagagggagactccgctgacgacatatct
gacaaagagggcgacgacgaagttcaaacaccggcagactttacagctagcttccgtgag
aagcagaatggacagtctaaaaatgcagaagacgatatcgcttttgctgacagcgactcg
gaccttggctccatctcgtcggttgaagaccaggaactggaagatgggtcagacgaggac
gaagacgaagacgaagatttcgaagtagatgatgatgacgataatgagggcgccttacga
tggaaagataacatgattgaaaatgccaaagccctccatggaaagcgccctagctatcgt
gtcaccgaccttagccgtatgctttacgacgaatccatcacacccgctgaagtcatctcg
agatggaaaggtgaggatcaggctggtggtgacgatgtggatggtgaagaagaggacgac
tttttcaaaaaggcagacattgagaatgagggagaatgggaggatcggacaatccccgtc
tttgattatgaagaattagagaacaaatggtccgaggaggatgcggtggaagccttacgt
cgccggtttgtctctgcaaagctctccgagggtgcggatagcgacgaagatgaagacgaa
gatgaaggtgatgatgaaggcgatggcgcattcgaagatttggaaactggcgaagttttc
aacggctttgatgaaaagctaggagaagatgcagataaaagcgaagcagagggagatgaa
gctgaaggttcggttaatcttgaagctgagcgtgagcaaaacgccaaaaagaaggaagaa
ctacgattgcgatttgaagaggaagaccgtgaaggtttcgccaatgcaaagaacggggat
cgtaacgaggacgaaggcgagcacgagtttggtgaagatgactggtacgatgctcaaaaa
gcacagctgcagaagcagcaggatatcaaccgtgccgaattcgagacgctcgatgcagcc
tctcgcgcacgagccgaaggataccgagccggcacttatgcacgtattgtgctcgaaaag
gtgccgtgcgagttctcaaccaaatttaacccccggttcccagtcattgttggtggtttg
gctccaactgaagaacggtttggttatgtacaagttcgtatcaaaaggcatcgatggcac
aagaagatcctcaagagcggcgacccgctcattttctccctcggctggcgacgcttccag
agtcttcctatgtacagcatttccgactcgcggactcgcaaccgcatgttgaaatatact
ccagagcatatgcattgttttgggacattctacggccccctggtggctcccaacaccggg
ttttgctgcgttcagtcattttccaacaagcttcccggtttccgtatcgcagcaaccggc
gtagtcctaaacgtcgacgagagcacggagattgtgaaaaagctgaaactgaccggttac
ccatacaagatcttccgcaacacggcattcatccgagacatgttcggtacttcgctagag
attgccaaattcgaaggcgcatctatccgcactgtgtccggcatccggggtcaggtcaaa
cgcgcgctcagcaaaccagatggacatttccgagccacatttgaagacaagatattgatg
agcgatatcgtcttcttgcgtgcctggtatcccatcaagccccaccgattctacaacccg
gttaccaacctgttagacctggatgagagtgcttctggtgagaacggatggcagagaatg
cgtctgactggcgaggttcgcaaagccgagggcattgcaactcctctccagaagaactcc
cagtacagcaccattgagcggccaacacggcatttcaaccccctccgcgtccctcgtcag
cttgcaaaggaattgccctataaatcgcaaatcactcagatgcggccacggaaagagcaa
acctacgtgcagaaacgtgcagttgttttaggcggcgaagagaagaaggcccgcgacctg
atgcagaagctcagcaccatgcacaacgataaacgggccaaacgcgccgcagcacaggag
gagcgcaagcaggtctaccgtgccaaggtggccgagaacgctgaaaagagggctgagcgg
gagaagcgcgagaagaaagattactggagacaggagggcaagaagagaaaacacacagat
agcgaaggtggtggtagaggtggtaaaaagcgtcggtga
DBGET
integrated database retrieval system
