Talaromyces rugulosus: TRUGW13939_05469
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Entry
TRUGW13939_05469 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K07573
exosome complex component CSL4
Organism
trg
Talaromyces rugulosus
Pathway
trg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TRUGW13939_05469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_05469
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
TRUGW13939_05469
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
TRUGW13939_05469
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
DUF2001
CoV_NSP2_C
YscJ_FliF_C
Motif
Other DBs
NCBI-GeneID:
55992966
NCBI-ProteinID:
XP_035344525
UniProt:
A0A7H8QWN2
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All DBs
Position
III:complement(1757529..1758278)
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AA seq
249 aa
AA seq
DB search
MEKSLPKLAVPGQQLASTTTYLSGSGTHVHNGQICASIAGPVYIEQSHAKPKTKSILSIS
RSANSPANKGAVPGQQQQQQKVAGAAATTTSKPKYNTLPSVDSIVLARVTRVQKRQVTVS
ILVVLDDQTATASSDNDNIAAILTSAANPENHNTSDELRFQALIRKEDVRAVEKDRVVLE
DMFRVGDVVRGSVISLGDQSFYYLTTARNDLGVVMARSEAGNMMFPVSWKEMRDPLTGLG
ETRKVARPF
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatcactacccaagcttgccgtaccaggccaacagctggcatccacaaccacg
tatctatccggctccggcacacacgtccacaacgggcagatttgcgcctcgatcgctggg
cccgtgtatatcgagcagtctcacgcaaaacccaaaacaaagtcgatactgagtatttcg
cggtcggcaaattcgccggcgaacaagggagctgtaccagggcaacagcaacaacaacaa
aaggtcgctggtgctgcagcgacaacgaccagcaaaccaaaatacaacactcttccatcc
gtcgactcaatagtgcttgcccgtgttactcgtgtacagaaacgccaagtcacagtgtct
attctcgttgtactagacgatcagacagccaccgccagctcagacaatgacaacatcgca
gccatcttgacctcggccgccaacccggaaaaccataatacctctgacgaacttcgtttc
caagccctgattcgcaaagaagatgtgcgcgctgtcgaaaaggaccgcgtggtgctcgaa
gacatgtttcgcgttggagacgtggtacgcggtagtgtgatttcacttggggaccagagt
ttttactatcttaccacagcgcgcaacgatctcggggttgttatggcgcgcagtgaggcg
ggtaatatgatgtttccggttagttggaaggaaatgagagatcccttgacgggtctgggt
gagacgaggaaagtcgcgagaccgttttga
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