KEGG   Talaromyces rugulosus: TRUGW13939_05539
Entry
TRUGW13939_05539  CDS       T06879                                 
Name
(RefSeq) uncharacterized protein
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
trg  Talaromyces rugulosus
Pathway
trg03020  RNA polymerase
trg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:trg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TRUGW13939_05539
  09124 Replication and repair
   03420 Nucleotide excision repair
    TRUGW13939_05539
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:trg03021]
    TRUGW13939_05539
   03400 DNA repair and recombination proteins [BR:trg03400]
    TRUGW13939_05539
Transcription machinery [BR:trg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     TRUGW13939_05539
  RNA polymerase III system
   RNA polymerase III
     TRUGW13939_05539
  RNA polymerase I system
   RNA polymerase I
     TRUGW13939_05539
DNA repair and recombination proteins [BR:trg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TRUGW13939_05539
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 55993036
NCBI-ProteinID: XP_035344595
UniProt: A0A7H8QWV2
LinkDB
Position
III:join(1963935..1964275,1964340..1964445)
AA seq 148 aa
MSDSQLFEDTFTITSINAQKYDRVSRISCTSTDNQTTFTLDVNTEIYPCAVGESVSLALA
STLSLDGKEEDSSGAGRGGWRDVGAGEQTLADDYDYVCHGKVYRFEEGSTAGNMSVFVSF
GGLLLYLDGPYSKLVPLKIDHIYLLLKK
NT seq 447 nt   +upstreamnt  +downstreamnt
atgtctgactctcagctcttcgaagacacgttcacaatcacatcgataaacgcgcagaaa
tatgaccgcgtctcgcgcatcagttgcacttcgacggataaccagacgaccttcacgctg
gacgtgaacaccgagatctacccctgcgcggtgggagaatctgtctctttggctctggct
tcaaccctgtctctcgatggaaaggaggaagactcttctggcgctgggcgaggtggctgg
agagacgtgggcgccggcgaacagaccctggcagatgattacgactacgtctgccatggc
aaggtgtaccgattcgaagaaggctctaccgctggcaatatgtctgtctttgtctctttc
ggtggtcttttgctctacctggatggcccatacagcaagctcgtgcctttgaagatcgac
cacatctatcttctccttaagaaatag

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