KEGG   Talaromyces rugulosus: TRUGW13939_05659
Entry
TRUGW13939_05659  CDS       T06879                                 
Name
(RefSeq) uncharacterized protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
trg  Talaromyces rugulosus
Pathway
trg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:trg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRUGW13939_05659
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:trg03019]
    TRUGW13939_05659
   03041 Spliceosome [BR:trg03041]
    TRUGW13939_05659
Messenger RNA biogenesis [BR:trg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     TRUGW13939_05659
Spliceosome [BR:trg03041]
 Complex B
  Other components
   Prp19-related factors
    TRUGW13939_05659
 Complex C
    TRUGW13939_05659
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_8 Mad3_BUB1_I
Other DBs
NCBI-GeneID: 55993156
NCBI-ProteinID: XP_035344713
UniProt: A0A7H8QYK2
LinkDB
Position
III:complement(join(2300002..2300284,2300350..2302361,2302419..2302472,2302520..2302636,2302692..2302781))
AA seq 851 aa
MPGTLLPPRSKRHHAQMERVSAAKPDLYLISSEDIIYEQDLGEDPGSIKPWISYIEYKQQ
NGTLYEQAFIMERACKQLPRSYKLWKLYLELRISHLRGRNPALHRDEYQKVNGLFERALV
LLNKMPRIWEMYLSFLLEQPLVTQTRQTFDRALRALPITQHNRIWKLYKSFARSASGDTA
IQIWARYMQVHPETAEDYIELLVELGRYTQAVRKYMEILNDSTFRSKEGKSHFQIWSEMV
ELLVNKAKKIDTQSYGGIDVEAIIRSGIERFSDQRGRLWAGLATYWITKGNFEKARDVFE
EGVTTVMTVRDFTMIFDSYVEFEESIIGTLMDQASIRSKKGKVDEDADFDLDLRMMRFEQ
LMDRRPFLVNDVLLRQNPNNVIEWEKRVGLWGKNKAEIVNTYAAAIAAINPKKAHGKFHE
LWVNYAKFYEQGGDLDTARVIFDKAVKVPFKTVAELAETWCEWAEMELRNENFDKAVDIM
AKATQAPKKSTVDYFDESLSPQQRVHKSWKLWSFYVDLVESVGTTDETRKIYDRIFELRI
ATPQTVVNFANLLEENKYFEESFKIYERGLDLFSYPVAFELWNLYLTKAVDRKISIERLR
DLFEQALDGCPPKFAKVLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRLEMFNFYIT
KSASNFGLTSTRPIYERAIAALPDSEAKDMCLKFAEMERRLGEIDRARAIYGHASQFCDP
RTNAGFWQKWEAFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQAIARSQQQRAQEN
GEADMGDEEADKEQADAMAALERQARAPVGFVAASTGPEGGNRPSGAQQPAPPANVNPDA
IDLDDDEDMNE
NT seq 2556 nt   +upstreamnt  +downstreamnt
atgccagggaccttgctccctcctcgatccaagcggcaccacgcgcaaatggagcgagtt
tcagcggcaaagccggatctttacttgatctcaagtgaagacatcatttacgagcaggat
ctcggagaagatcctggaagtattaagccatggatatcttatatcgaatataagcagcaa
aatgggacactctatgaacaagcctttattatggaacgggcctgtaaacagctccctcgg
tcctacaagttatggaaactgtacctggaactccgaatcagccatctccgtggtcgcaac
cctgctctccaccgcgacgaataccagaaagtcaacggactcttcgagcgtgccctagtc
ttgctcaataagatgccccggatttgggagatgtacctttctttcctgctggaacaacca
ctggtcacacagactcgtcagacctttgatcgtgcacttcgtgctttgcctatcacccaa
cacaaccgcatttggaagctatacaaatccttcgctcgttctgcctctggagataccgct
atccaaatatgggcacggtacatgcaagtccaccctgaaacagcggaggattatatagag
ttgctcgtggaactcggtcgctacacccaagccgtacgaaagtacatggaaattctcaat
gattcaaccttccggtcgaaagaaggcaaaagccactttcaaatttggagtgagatggtt
gagctgctcgtcaacaaggcaaagaaaatcgacacccagtcttatggaggaatcgatgtc
gaggccataatccgcagcggaattgaacgattttctgaccaaagaggaagactttgggcc
ggtcttgctacatactggattacgaaaggcaatttcgaaaaggctagagatgtctttgaa
gaaggagtcactactgtcatgacagtgcgcgatttcactatgattttcgattcttatgta
gaatttgaagagtcaattatcggcactctcatggatcaagcttctattcgttctaaaaag
ggcaaggttgatgaggatgcagactttgacctcgatttgcgcatgatgcgatttgagcag
cttatggacagacgccctttccttgtcaatgatgttttgctcaggcagaaccccaacaac
gtcattgaatgggaaaaacgcgttgggctatggggcaaaaacaaggcagagattgtcaac
acatacgccgctgccattgctgctatcaatcctaagaaggcacacggcaagttccatgag
ttgtgggtgaactacgccaagttctatgagcaagggggtgatctcgacactgcgcgagtc
atatttgacaaagctgtcaaagtccctttcaaaacagtagccgagctggctgagacatgg
tgtgaatgggccgaaatggaactccgaaacgaaaacttcgataaggcggttgatatcatg
gccaaagcaactcaagcacctaaaaaatcgacggtggactacttcgacgaatctctttcc
cctcagcaacgagtgcacaagagttggaaactatggagtttctatgtcgacctcgttgag
agtgttggcaccaccgatgaaactaggaagatttatgataggatctttgagctacggata
gcaacgccccagacggtggtcaacttcgccaaccttctggaagagaacaaatactttgaa
gagtcttttaaaatatacgaacgtggcttggatctattcagctatcctgtggcattcgag
ctttggaatctgtacttgaccaaggccgtggatcgcaagattagcattgaacggctacga
gacctttttgagcaagctcttgatggatgccctcccaaattcgccaaagtattgtatttg
atgtatggcaacttggaagaagagagaggccttgccagacacgctatgcgcatttacgaa
cgtgccacgagggccgtctccgatgaagaccgtctcgagatgttcaacttttacattacg
aaatctgcgtccaacttcgggttgacatcgacccgtccaatctacgagcgtgcaattgca
gctttgcctgatagtgaagctaaggatatgtgcctcaagtttgcggagatggagagaagg
ctcggtgaaatcgaccgggctcgtgcaatctatgggcatgcttcgcaattctgcgacccc
cgtaccaatgccggcttctggcagaaatgggaggcattcgaagttcagcacggtaatgag
gatacgtttaaggaaatgctccgcattaagagaagtgttcaagcacaatacaacaccgat
gtcaatttcattgcctctcaggccattgcccgtagccagcaacaacgcgcccaagaaaac
ggagaagcagacatgggagacgaagaggcagacaaggaacaagcggacgcgatggcagca
ctggaacgccaagctcgtgccccagttgggtttgttgctgctagcacaggtccagaaggc
ggaaatcgcccatctggagcccaacaacctgcgccaccagcaaacgtaaatcccgatgct
atcgatctcgatgatgatgaagatatgaacgagtaa

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