Talaromyces rugulosus: TRUGW13939_05844
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Entry
TRUGW13939_05844 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
trg
Talaromyces rugulosus
Pathway
trg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRUGW13939_05844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_05844
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
TRUGW13939_05844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
HBS1_N
GTP-eEF1A_C
MMR_HSR1
GTP_EFTU_D2
GTP_EFTU_D3
Gtr1_RagA
FeoB_N
Septin
Motif
Other DBs
NCBI-GeneID:
55993341
NCBI-ProteinID:
XP_035344895
UniProt:
A0A7H8QXN3
LinkDB
All DBs
Position
III:complement(join(2844906..2846113,2846177..2846362,2846416..2847120,2847326..2847388,2847446..2847668))
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AA seq
794 aa
AA seq
DB search
MSRHRVKSLEYDDDFDEEYDEADPEEQEQLEAYTNEVLNELHTGQPPVTASREEVQEALW
HYYNDVPKSVNYLRGKKVKETKKETAPTTKPKIGGVYPVDIAQYSSCPVPFSAAEFFRDA
PWLNIPLDRKADIIVEPLYPRLGLLGGAPEGKMSKLAALAAARKKKDSEKSSAAPEQPSN
TEQTEKRSAQRSLAERLAVTSTKVPEKAGGISALSKESRLGSRLSKPRSAPVAQDHSEET
VSRPSVDTDRPAPKPPQQQPEESANLRAPPSTFATAIVGDGNYLSTSEPGHLRSNKFDVM
QVYGQDFTEAFDFVGPSPDDVVINAQSASKGLKSKQAASSKGSGAKKNPSDISGGMKALS
VEEPVKVKSKNLNVLAEYEKSHQKKAANFVVIGHVDAGKSTLMGRLLADLNAIDQRTMDR
YRREAENIGKGSFAFAWVLDQGSEERARGVTIDIATNKFETDKTQFTIVDAPGHRDFIPN
MIAGASQADFAVLVIDAGTGNFESGLKGQTKEHALLVRSMGVQKVVVAVNKMDSVSWSKD
RFDEIEQQISSFLTTAGFQAKNLSFVPCSGYHGDNITKSSNDPNASWYKGSLLIDELETS
EPFSHALDKPLRMTIGDVFRGGVQNPLSISGRIDAGSFQVGDPLVVMPSGESALIKGLEK
DGEPSDWAVAGQNVTIHLANIDPAHLRSGDIVCSPASPIQNIRTFTTKVLAFDHLMPMQV
DVHRGRLHVSGRISRLVATLDKGSGAAIKKKPKIVSPGTVARIVVEIDQPVPLEAPGRIV
LRAAGETVAAGLLE
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccatcgagtcaagtcactcgaatacgacgatgatttcgatgaagaatacgac
gaagcagaccccgaagagcaagaacaactggaggcatacacaaatgaggtgctcaacgag
cttcacaccggacagccgccggtgaccgcgtcgcgagaggaggttcaagaagccctctgg
cattactacaacgatgtaccgaaatcggtgaactacctgcgtggtaaaaaggtgaaggag
accaagaaggaaacggcgcctactacgaagccgaagataggaggggtatatcctgtggat
attgcacaatattcttcttgtccggtacccttttcagccgccgagttctttcgtgatgca
ccttggttgaacattccgctggatcgaaaggcagacattatagtggaaccattatatccg
cgactgggcttgctcgggggtgctccggaaggcaagatgtctaagttagctgctcttgct
gcagcacggaaaaagaaagacagcgagaaatcatccgctgcacccgaacaaccatcaaac
acagagcaaactgaaaaaaggtcggcgcaacgctcgttggcagaacgattagctgtcact
tctaccaaggtgcccgaaaaggcgggaggaatttcggcgctcagcaaggagagtcgtctg
ggaagccgcctttcaaaaccaaggagcgcccccgttgctcaggatcatagcgaagaaacg
gtttcacggccatccgtggacacggacaggcctgcaccgaagccgccacaacagcaaccg
gaagaaagtgctaatttgcgtgcacccccttcaacttttgcaaccgcgattgtcggagac
ggaaactatctttcgacatctgagcctggccacctaagaagcaacaaatttgatgtcatg
caagtttacggacaggactttactgaagcttttgactttgtaggacccagtcccgatgac
gtcgtgatcaatgcgcagagtgcatccaaaggcctcaaatcaaagcaggctgcatcatca
aaaggttctggtgctaagaagaatccaagtgatatatcgggtggcatgaaagcactcagc
gtggaagaaccagtcaaggtgaaaagcaagaatctcaacgttttagcagaatacgaaaag
tcacaccagaaaaaggcggccaattttgtggttattggccatgtagatgctggaaagagc
acgcttatggggcgtttactcgccgacttgaatgcaattgatcagagaacgatggataga
tatcgtcgtgaggctgagaatattggtaaaggttcgtttgctttcgcatgggtgttggac
cagggttcggaagagcgtgcccgaggcgtgaccattgacattgcaacaaacaaatttgag
accgataaaacacaatttacgattgttgacgcgccgggtcaccgcgactttataccgaac
atgattgctggggctagccaagcagattttgctgtacttgtaatcgacgcaggaactgga
aatttcgagtctgggttgaaaggtcaaaccaaggagcatgcgctcctagtccgaagcatg
ggtgtccagaaagtagtggttgcggtcaacaaaatggattcagtatcctggtctaaagac
cgattcgatgagattgaacaacagatctcatctttcctcacaacagcagggttccaagcc
aaaaatttatcatttgttccttgttcgggttatcatggtgacaacatcaccaaaagcagc
aatgatccgaacgcctcttggtataagggctctcttcttatcgacgaactcgagacatcg
gagcctttctcccatgcgcttgacaagcccctgcgcatgacaattggtgacgtgtttcgc
ggaggcgtccagaatccgctctcaatctcaggacgcattgatgccggtagctttcaagta
ggagatccgcttgtggttatgcccagcggcgagtcagctttgatcaaaggtttagaaaag
gatggagaacccagtgactgggctgtcgcaggacaaaacgtcaccattcatcttgcgaat
attgaccccgctcatctgagatcgggcgatattgtctgcagtcctgcctcgccaattcaa
aatatacgaacattcactaccaaggtgttggcatttgatcacctgatgccaatgcaggta
gacgtgcaccgaggccgcctacacgtatcgggtcgcattagtcggctggtggccacatta
gacaagggctcaggagccgcgataaagaagaagccaaagatcgtttctccgggaacagtt
gcaaggattgtggtggagatagaccagccagttcctcttgaggcgcctggacgaatcgtg
ctccgcgcggctggagaaactgtggcggcggggttgctcgaatag
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