Talaromyces rugulosus: TRUGW13939_05855
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Entry
TRUGW13939_05855 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
trg
Talaromyces rugulosus
Pathway
trg04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
TRUGW13939_05855
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
trg01002
]
TRUGW13939_05855
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trg04131
]
TRUGW13939_05855
04121 Ubiquitin system [BR:
trg04121
]
TRUGW13939_05855
Enzymes [BR:
trg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
TRUGW13939_05855
Peptidases and inhibitors [BR:
trg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
TRUGW13939_05855
Membrane trafficking [BR:
trg04131
]
Endosome - Lysosome transport
Others
Others
TRUGW13939_05855
Ubiquitin system [BR:
trg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
TRUGW13939_05855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Cyt-b5
UCH_1
USP8_dimer
Rhodanese
Motif
Other DBs
NCBI-GeneID:
55993352
NCBI-ProteinID:
XP_035344906
UniProt:
A0A7H8QYG7
LinkDB
All DBs
Position
III:complement(join(2885585..2885749,2885804..2885930,2885998..2886144,2887478..2890356,2890459..2890659,2890719..2890937))
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AA seq
1245 aa
AA seq
DB search
MSPSTTAFPSAPGPTSGIRGGDVGGMQLPGGRSSWTGPYGTASPASGDRRARYPYIKDLQ
DQAARLEVDERSPINHLLATASEALQKCQSFVNQGDLGTAYVQYLRASEIIVNTIPRHVD
YRLLPVHHPEWYHQFSNLMMSISQKQSTMDAIKEQILEDNLATQIRPQGSPSMDIQRAPS
HQQSAPLRMPSPADFQSNGASQQYNGVGKQNGTRSAAEDLLAQRFARLQTTQSSPSNGQH
SSGYVNSTLAASPPAETLSDYRPSSSSSVQSLTGTSFGSGASRPFGPRAIGTPQHISVPP
KKPLNVNTVSLPRAPSPTYSPIWSVPSQPPPSNPPRTSSESSRATPSKYAQIVGSRLSSP
RRSEDDNPYRSRTPNGVHLAHENKSSSNELPFNTTIRAQQLLDYMRKYNVLVIDARPREL
YDSGHIYARSILCIEPVVLKENMSAEELEERLVVSPDNELSLFERRNEFDLVVYYDQGTD
SVSYLAGSPVGTSAPHLRALYDTLYEFNAYKPLKDGRPPAMLIGGLDAWVDLVGSQSLAT
SSTAAIMGSIQAKRPVQKPGRPLGRVPTASANSSLEIRKRRLREFKPLNSEELTAWMERA
KKEEVMAHTYEDEEGTITEEPEDEANAQEPPSPFVHTYEDFLRRFPEPQAIQQSMVAPEP
RVAMPAMPNYAAPVPLAPSRPPPALPRPNYGGLSDGRQIQPPLARQNSASKTALYTSSSL
MTRLKMPRTGLTNFGVTCYMNSTLQCLSATTVMSKFFIDDRYRYYVQKNWKGSQGVMPGL
YANLIRSLWKNDVEVIVPTSYRNFCGRLNREWAIDRQQDAKEFFDFAVDCLHEDLNVNWQ
RNQLRPLTFEEEMQREKMPVPKVSRIEWDRYCHREESFISSLFAGQHASRLRCTTCHRTS
TTYEAFYSISVEIPPTGTGDIYQCLQSYCKEEMLSGDEVWKCPYCKCERVATKQIIITRA
PQILVVHFKRFSASKTQSARKIHTRVEFPLHGLRMDNFVIPYPAVNGENANASNAAAAAP
PSLSPTIPPFTYDAYAVLRHLGSTLSGGHYISMVRDAQRQCWRRFDDERVADFNPRDLRP
SDRLQNEQAYIVFYERVPAKLIYSLPLLFTMADKEFTYAEVSAHKTKKDLHIVVNEGVYN
VTSFVDEHPGGEEVLLDVAGQDASEAFEDVGHSDEAREILDTLKIGTLKRLPGDPAPRAI
STSDSSSPGSSGSGSGGVGLYAIVLIGAAAAYAAYQYLQLQTETQ
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccagtacaacggcctttcccagcgcccccggcccgacgtcaggcattcgaggg
ggagacgtcggtgggatgcagctccccggaggacggtcaagttggactggcccatatggc
acagcttcacccgcttctggggacaggcgagcgcggtatccgtatataaaggatctccaa
gatcaagctgcacgtctggaagtcgatgaacggagcccgatcaaccatcttctcgcgact
gcgtccgaagccctacaaaaatgtcaatcattcgttaatcaaggagaccttggaacggcc
tatgtccaatacctccgcgcatctgaaattatcgtgaataccattcctcggcatgtagac
tatcggttgcttcccgttcatcatccagaatggtaccatcagttctcgaatctcatgatg
tcaatcagtcagaaacagtctaccatggatgcgattaaagagcaaattctcgaagataat
ctggcaactcagatacggccacaaggatctccttctatggatatacaaagggcaccaagt
caccagcaaagtgcccccctcaggatgcctagcccggcggacttccaatcgaacggggca
tcgcagcaatacaatggggttggaaaacaaaacgggacaagatctgctgcagaggatttg
cttgcccaacgttttgctcgattgcaaactacacaaagttctccgtctaatggacaacat
tcctcaggctatgtcaattctactttagcggcatcaccaccggccgagacactttccgat
tatcgtccttcttcgtcgagttcagtgcaaagcctaacaggcacttccttcggttcaggt
gcctcacggccattcggtccacgcgcgatagggacacctcaacatatatctgttcctcca
aaaaaaccgttgaatgtcaacactgtttcgctccccagagcaccaagcccaacttacagt
ccgatatggtcggtgccgtctcaaccgccgccgtctaaccccccgcgaacttcaagcgaa
agctctcgggcgacaccgtcgaagtatgctcaaattgttggatcacgattaagtagtccc
aggcgttccgaagacgacaatccataccggtcccgcacgcctaacggggttcatcttgca
cacgaaaataagagtagctcgaatgagctgccattcaacacaactatccgagcgcagcaa
ttacttgattatatgcgcaagtacaatgtcttggtcatagacgcgcgtcctcgtgaactc
tatgacagcggacatatttacgctaggtctattttatgcatcgagccagtggtattaaaa
gagaatatgtcggcagaagagctggaagaacggctggttgtttcgccagataacgagcta
tccttatttgaacgacgaaatgaattcgatctcgtggtgtattacgaccaaggtacagac
tcggtcagttatctcgcgggatcgccggttggaacatccgctcctcacttaagagcgctt
tatgacacgctgtatgaattcaatgcatacaagcctttgaaggacggcagaccaccagct
atgttgataggtggactcgacgcttgggtggatttagttggctcccagtcactggcaacg
tcttctacggcagcgataatgggatctatacaggccaaacggcctgtgcagaaacctgga
cgacctctcggaagggttccgacggcaagtgctaattcgagcttggagatccggaaaaga
cgactacgcgagtttaagcctttgaattccgaagagcttacagcatggatggaacgagcc
aaaaaggaggaggtcatggcccacacttacgaagatgaagaagggacgataacagaggag
cctgaagacgaagccaatgcacaggagccgccatcgccatttgtacacacttatgaagat
tttctacgacgatttcctgagccccaggctatccaacaatcgatggttgctccagagccc
cgagtggccatgccggcaatgccaaattacgcagctcctgttccactagcaccatcacga
cccccgccagcactgccgcggccgaattatggaggactctcagatggtcgccagatacag
ccacctcttgctcgtcaaaactctgcaagcaagacggcgctatacacatcaagctctctg
atgacacggctcaaaatgccacgaactggacttaccaatttcggagtgacgtgctacatg
aattccacgttgcagtgcttgagtgcgacgacagtaatgagcaaattttttatcgatgat
cggtaccggtactatgtccaaaagaactggaaaggatcacagggagtaatgcctggcctc
tatgccaacctgattcgatcgctgtggaaaaacgatgtcgaagtcattgtgccgacctca
taccgcaatttttgtggtcgattgaaccgggagtgggcaattgaccggcaacaagatgca
aaagagttttttgactttgctgttgattgcctacatgaagatctcaacgtcaattggcaa
cgaaaccagctgcggcctttgactttcgaggaggagatgcagcgagaaaagatgccagtg
cctaaagtatcgaggattgagtgggatcgatactgtcatcgcgaagaatcgtttatatct
tcattatttgctgggcaacatgccagtcgtctacggtgtacgacatgtcaccgtacgtcg
acaacgtacgaggcattttatagcatcagcgtggaaataccgccgacggggacaggggat
atctaccaatgcttgcagagctactgcaaagaagagatgctgagtggtgacgaggtttgg
aaatgcccatattgcaaatgcgagcgggtggcaacgaaacaaatcatcatcactcgagct
ccccagattctagtcgtccacttcaaacggttctcggcgtccaagacgcaatcggcacgc
aagattcacactcgcgttgaattcccattgcatggacttcgcatggacaatttcgtgatc
ccttatccagcggtgaatggggaaaatgcaaacgcatcaaatgcagctgctgcagcgccg
ccgtccctttcgcccacgattccgccgttcacgtacgatgcatacgcggttttacgacac
ctgggctcgacgctgagcggagggcactatatctcgatggtacgagatgcacagcgtcaa
tgctggcgtcggttcgacgatgagcgcgtggccgatttcaacccgcgagacctgcgacca
tcggatcggcttcaaaacgaacaggcgtacattgtattttatgagcgtgtccccgctaaa
ctcatctactccctccctcttctattcaccatggccgacaaggaattcacatacgccgag
gtctcggcccacaagaccaagaaggacctccacatcgtagtcaacgaaggcgtctacaac
gtcacctcgttcgtcgatgagcaccccggtggtgaggaagtccttctcgatgtcgccggc
caagatgcctccgaggcctttgaggatgtcggccacagcgacgaggcccgcgagattctc
gataccctgaagattggcaccctcaagagactgcctggcgaccctgccccccgagccatc
tcgacctcagactcttcctcgcccggatcctccggctccggtagcggtggtgttggtctg
tatgccatcgtcctgatcggcgccgctgccgcctacgctgcctaccaatacctgcaactg
caaaccgagacccagtaa
DBGET
integrated database retrieval system
