Talaromyces rugulosus: TRUGW13939_05861
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Entry
TRUGW13939_05861 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K15165
mediator of RNA polymerase II transcription subunit 13, fungi type
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_05861
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
TRUGW13939_05861
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
Med13_N
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
55993358
NCBI-ProteinID:
XP_035344912
UniProt:
A0A7H8QX98
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All DBs
Position
III:join(<2912122..2912148,2912208..2915391,2915452..2916105,2916161..2916789)
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AA seq
1497 aa
AA seq
DB search
DAITNISVINGFSVIYWRIYNEETNISTQASETVASNGYSILKLLSRLKDLEIKLRNLGC
LVSYYPRRLGLWIFSSTPGFECVDSLAQESPNQDLKDPEKLLIGSTSLKGKYLALIQDVC
PSLLTISTVSASGSITATDLIRSLSADPSSTSGRTNSTVLYASFVSAVAGLVSLQLVRRL
DAIPLGARTLFTPIEPSFFGGLAIADGNADTLPALTTLRIELSLTGKVIISLHTAYQEGI
SRLGGYDLTEVNPADVRPNTDIWLAPNGTVARLITFNAEESNVFAERQKNDGTTRQFVEA
RQKIWKDTVVEWMRDVGMSVNSSEEEHWVEVEVSEPFYARFAADYLRQVDDVQTVSPLKR
ILWPSRFCFRRAKLTSASLIDDLDPLVTDCDDPVNFAQNWIGTASARQGKPVPSTSHMQQ
TPQNKDSSTPRIDFSEPIESLARVAQYPDLQSASTVYPTPPDGALASAMNQTASEAFGSD
GHDINMSHAPGDGAFPRRGVQMARNLGDATAARVKSEAEIASGLYDTTGDEDLFGDINDK
DFGPKGITDDDFNFFDDPEIDDFDMDKPVAEPAHETPQQPQLEAADIQTPHAVISIDKPQ
DEGVMQPPIKSDPQSDQVPESVLNVEKIEANEHQNIATAASPGKYWTLPEQAMSPPLSPV
EVKKLLFSTADTDTTEAGKDSKRIDLDADKKQSLYDSISFQQGLTMSDQKYSNSGHFFFA
AQKNENPTANLASEIPKVGFPRGRKPIPSHHSERPNGTQQSPSATRIPRSASVSSSETSF
DSSDDDYERESSPARLTNLKRKRPLSEAERSTTSSLERLSIASEMDTNLTREDYCVFLGN
FFSVITDWSLAGYFAFKQNQYSPVLIRREDHVQLAQLMVDQLAQSSLSHRIDGWKTTPDL
ENDTVPLHTPLDDTPILGENERLDFKTLVSLHDNMQMTMETPSARPNMQRKDAKGSINKI
SLPHLHVHRGKDYLDVLPSSMSFWETFGLEPANGPKDISAYCIYPHFATEGADAFMTRLG
LVYSSCSFGQHVRGDRHKTFENGLGAWSIAKGDGAYVRTMQSLKNLCENLGAALSKAPSA
KENFVIYVVNPFTHGAAFADISAAFLHLFHKYIGDVDRNYAKSQMNELVLQIIPMSFVYS
PTSIAVPTQWQYLNLALEVYGRCPPKDASSGITGYAPPIVLAEAAPKSLPFRVTSERVSP
FQEGRCLHLAISRSVDQRWISAAWSDSSGSFQILMSYCLRARGSNVNRTLSEVRQEIWET
TKDIMERTQTRSKVFLVRTEPIDQEEAEAWNGLAARYNQSKAMPVELTLFSVNVAPGLHL
ELPAAPISANMINPASTPVTTPYGGVSSPDQFGVGTPASGGQGPMNAVTPTELSAYVEPD
ADAVLIDAHDESWAVVLSHRLNNSTYITEYRPALISGYLLRRKGVNDSQGVAAMSVNLVH
TSRPSGAYEAVLREALSSYRDLATLARAKGTLAVQHNTLPWHIATAVKGQEFLSYVF
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
gacgccatcactaatatcagtgttattaatggcttttctgtgatatactggagaatctac
aatgaagagaccaacatcagcactcaggcttcggaaactgtcgcaagcaacggctacagc
attttaaagctcctgagcagactcaaggacctagagatcaaactgagaaaccttggctgt
ctagtctcatactatcctagacggcttggtctatggatattctcttctaccccaggtttt
gaatgtgtggattcgcttgcccaggaatcgccaaaccaagacttaaaagacccggaaaag
ttacttattggaagcacttcgctcaagggcaagtatctcgcgctaatccaagatgtctgc
ccaagtttgctgacaatttcaacagtctctgcttcaggtagtataacggctactgacctc
attaggtctctatctgccgacccgtcttcaacttccggtcggacaaattctactgttctc
tatgcatcatttgtatctgccgttgcgggactcgtcagtctgcaacttgtgcgtcgtctt
gatgcgatcccattgggcgctcggacattatttacgccaattgaaccgagctttttcggc
ggtctggcaatagccgatggcaacgcagacacgcttcctgctttgactactctacgaata
gaactttctttgaccggaaaggtcatcatctctctgcataccgcctaccaagaagggatc
tcgcggctaggtggatatgaccttacagaagtaaacccagccgacgtgagacccaacaca
gatatctggctcgccccgaatgggacagtcgctcggttaataacttttaatgctgaagaa
tctaatgtttttgcggagaggcaaaagaacgatggtactacccgtcaattcgtggaggcc
aggcaaaagatttggaaagacacggttgtcgaatggatgagagatgttggtatgtcggtc
aattcgtcggaggaagaacattgggttgaagtggaagtgtcggaaccattttatgcacgg
tttgcagctgattacttgcgtcaagtggacgatgttcaaacggtgtctcctctcaaacga
attctttggccatccagattttgctttaggagggctaagctcacctctgcatccttgatc
gatgatctcgatcctctcgttaccgattgcgatgaccccgtgaattttgctcaaaattgg
atcgggactgctagtgcccgacagggaaagcccgtacctagcacctcacatatgcagcag
acgccgcagaacaaagattcatcaacgcctaggattgatttttccgaaccgatcgagagt
cttgctagggtggctcaatacccagaccttcaaagcgccagtacagtgtaccctacgcca
ccagatggcgctctcgcatcggccatgaatcaaacggcttctgaggcgtttgggtccgat
ggacatgacattaatatgtcacatgccccaggagatggcgcatttccaaggcgaggggtg
cagatggctaggaacctgggtgatgcaacggccgcccgagttaaaagcgaagcggagatt
gcaagcggtctttacgatactaccggtgacgaagatttgtttggggatataaatgacaaa
gattttggaccaaaaggaattacggatgatgatttcaacttttttgatgatcctgagatc
gatgacttcgatatggacaaacctgtcgctgaacctgcccacgaaacaccacagcaaccg
caactagaagcagccgacattcaaactccgcatgcagttatttctatagacaaaccccaa
gatgagggcgttatgcagccccctataaagtcagacccacagagtgaccaggtgcccgag
tctgtcttgaacgtcgaaaaaattgaagcaaatgaacaccaaaatattgctactgctgct
tcccctggcaaatattggactcttccggaacaagccatgagccctcctctcagtccagtc
gaagtgaagaaacttctattttcaacggcagacacagacacaacagaagcggggaaagat
tccaaacgtatcgatcttgatgccgacaaaaagcaaagtctttacgattcgatctctttc
caacaaggacttactatgtccgatcagaaatattctaactccggccatttctttttcgcg
gcccagaaaaacgaaaacccaacagcaaatctcgcatccgagattccaaaagtgggattt
cctcggggccgcaagccaatcccttctcatcattccgaacgcccgaatgggacacagcag
tccccttcggcgacacgaattccacgctcagcatctgtttccagcagtgaaacaagtttt
gattctagcgatgacgactacgaaagagagtcgtcgccggctcgactgaccaacctgaaa
cgaaaacgtccactttccgaagcagagcgatccacaacatcttcgttagaaagactatct
attgcgtctgaaatggacaccaacttgacaagagaagactattgcgtgttcttagggaac
tttttctctgtcatcactgactggtcgctggctggctactttgcctttaaacagaaccag
tattctcccgtcttgattcgaagagaggaccatgtccaattggcacagcttatggtggat
cagcttgctcagtcatcactttctcatagaattgatggctggaaaacaactccagacctc
gaaaacgacacggtcccacttcacacacctttagatgatacccccatcctaggagaaaat
gaaagactggattttaagacactggtttctctgcacgacaacatgcaaatgacaatggag
acgccttcagctcggccaaatatgcaacgtaaagatgccaaaggatcgattaacaagatt
tcgcttcctcatctacatgtgcaccgtggaaaggattatttagatgttcttccctcgtct
atgtcgttttgggaaacctttgggttggaacctgccaacggaccaaaagacatttctgct
tattgcatatacccacatttcgcaacagaaggtgccgatgcctttatgacacgcttggga
ctcgtttattccagttgcagttttggtcagcatgttagaggagatcgacataagacgttt
gaaaatggtttaggggcttggagtatcgcaaaaggagatggggcatatgtgcggacaatg
cagtcgttgaaaaatctgtgcgaaaatcttggagccgcgttgtccaaagccccttctgcc
aaggagaattttgtcatctatgttgtcaatccttttacacatggagcagcctttgccgac
atttctgctgcatttttgcatctttttcacaagtacatcggcgatgttgatcggaactat
gcaaagagccagatgaatgaacttgttttgcagattattccgatgagtttcgtgtattct
ccaacatcgatagcagtgcccacgcagtggcaatatctcaatctggctctggaagtctat
ggtcgatgcccaccgaaggatgccagtagtggcattacagggtatgcacctccaatcgtt
ctcgcagaggctgctccaaagagccttccctttagagttacctcggagcgcgtttctcct
tttcaagaaggccggtgccttcatttagcaatctcacgaagtgttgatcagcgctggatt
agcgcggcatggtctgacagctcaggttcttttcaaatattgatgtcgtactgtctgcga
gctcgaggttcaaatgtcaaccgaactctgtcagaagtacggcaagagatatgggaaact
acgaaagatatcatggagcgaacacaaaccagatcaaaggtctttcttgtaaggacggag
ccgattgaccaagaagaggctgaagcgtggaatggacttgctgcacgctacaatcaatcc
aaggcgatgccagtcgaactgacgcttttcagcgtcaatgtcgcacctgggctacatttg
gaacttccagcagcgccaatttcagccaacatgatcaacccagcgtcaaccccggtgact
acaccatacggcggagtctcatcgccagaccaatttggggttgggaccccagcaagtggt
ggtcagggaccgatgaatgccgtgaccccaacagagctctcagcttatgttgaacctgat
gcagatgcggtgcttattgatgcacatgacgagtcttgggcagtggtcctatcacaccgt
cttaacaactcgacctatataacagaatacagaccagcccttatcagcgggtacctacta
cgccgaaaaggcgtcaatgacagccaaggagttgcagccatgtctgtgaacctggtccac
acctcgagaccctctggggcatatgaagctgtgcttagagaggccctgagcagctaccga
gatctggcgactctcgcccgagccaaaggcacattagccgtacagcacaacacgctacca
tggcatattgccactgccgtaaaggggcaggaatttttgagctatgtattttaa
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