Talaromyces rugulosus: TRUGW13939_05925
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Entry
TRUGW13939_05925 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trg03009
]
TRUGW13939_05925
Enzymes [BR:
trg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRUGW13939_05925
Ribosome biogenesis [BR:
trg03009
]
Eukaryotic type
Pre-60S particles
Helicases
TRUGW13939_05925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-GeneID:
55993422
NCBI-ProteinID:
XP_035344976
UniProt:
A0A7H8QYN6
LinkDB
All DBs
Position
III:join(3068179..3068430,3068495..3069754,3069812..3070681)
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AA seq
793 aa
AA seq
DB search
MGLKRGREGRGPADKSKKKPKVQAQSGAANPDPAPSQIFGVDDLNWKSVPLPDRLDDLGG
FFGLEEIDGVDVVRQKTAGDIKFKAAANKPEKSILKKDPVVEENGSNNDDEWSGFSDQEV
DVQTQEEQKPTPKPKTDTHQKTSTDNVNEKKTKKETVANKVENEQDTQQKTSTDNVNKKK
TKKETVAKKVENEQKEKLPSLSFTVLENEEEEDGVDVSAWDSLGLSTSIQTGLSKLKFSS
PTTIQQATIPEVLAGHDVVGKASTGSGKTLAFGIPILEHYLSTRGQRDAKKDKKSFAPLA
LILSPTRELAHQLAKHIGELNTHTPAADARIALLTGGLSIQKQQRLLAEADLVIGTPGRV
WEVLSSGSGLIQGMSKIQFLVVDEADRLLSDGHFKEMGQIVDALDRKEYDDRPEDNETEE
EDETIRERQTLVFSATFHKGLQQKLSGKGKFMDQNLLDKNESMEYLLQRLNFREQRPKFV
DVNPISQMAEGLKEGIVECGAMEKDLYLYTLLLYHPGHRTLVFANSISAVRRLSQLLKNL
GIPALALSSNMEQKARLRSVERFSSPSDAGSVLIATDVAARGLDIKGIDFVVHYHVPRTA
DMYVHRSGRTARAGASGKSVLICAPDEVVGMARLVAKVHAQAEAKKSTNRNPLESLELDR
RVVSRVKPRMSLAKKITESTIAKEKISSEDNWLRNAAEELGVDYDSEEFEKQGSKAKGRG
RGGGRSQKEKEAGSISKAEMAGMKAELKELLSKRINIGVSERYITAGRVDVEELLREQGN
NKSFIGLLDKLEF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgaagcgcggaagagaaggccgcggcccggctgataaatcgaagaagaaaccg
aaagtccaggcgcaatctggcgcagcaaatcctgacccagcgccatcccagattttcgga
gtcgatgatcttaattggaaatccgtgccgctcccagaccgactcgatgatctaggtggg
ttttttgggttggaagagatagacggggtcgatgttgtccgacagaaaaccgccggagac
atcaaattcaaggccgctgcgaacaaaccagaaaaatccatactgaagaaagatcctgtc
gtcgaagaaaatgggagcaacaatgacgacgagtggtctggcttcagtgatcaagaagtg
gacgtccaaacacaggaggaacaaaagccaacaccgaaacctaaaacggatacccaccaa
aaaacctctacggacaatgtgaatgagaagaagactaagaaagagactgtcgcaaataag
gtcgagaatgaacaggatacccaacaaaaaacctctacggacaatgtgaataagaaaaag
accaagaaagagactgtcgcaaagaaggtcgagaatgaacagaaagagaagctaccctca
ctgtcatttaccgtacttgaaaatgaagaagaagaagacggagtggatgtttcagcgtgg
gattcactggggttgtcaacgtcgatacaaacaggcctttcgaagttgaaattctctagc
ccgacgacaattcaacaagccacgatcccagaggttcttgccggccacgacgtcgttggc
aaagcttcaaccggttctggcaaaactttggcctttggcatacctattctggaacattat
ttgagtacaagagggcaaagagatgccaaaaaggataaaaagtcctttgcaccactagcg
ctgatactgtcgccgacgagagaactggcccaccaattggcaaaacatatcggagaactc
aacacgcataccccggccgcagatgctaggatcgccctccttacaggtggattgtctatt
cagaagcagcaacgtctcctagcggaagctgatctcgtcattgggacaccgggtcgagta
tgggaagttctcagctctggttcaggactgatccaaggaatgtcgaaaatacaatttttg
gtcgtcgacgaggctgatagactactgagtgacgggcactttaaagagatggggcaaata
gtagatgctcttgatcgaaaagaatacgacgatcgcccagaagacaatgagaccgaggag
gaggatgaaacgatacgagaaagacagacactcgtcttttctgcgacattccataaaggc
ttgcagcagaagttgagtggaaaaggaaaattcatggaccaaaatctcttggacaaaaac
gagtccatggaatatttgctacagaggcttaatttccgtgagcagcggcctaaatttgtc
gatgtcaacccaatttcacagatggcagaaggcctcaaggaggggatcgttgagtgtggt
gccatggaaaaggacctctacctctatacactattgctctatcatccggggcatcggaca
ctggtgtttgcaaactccatttcagccgttcgccgcctgtcacaactacttaaaaacctt
gggattccagcactggctttgagttcaaatatggaacagaaagcgcgcctgcgttcggtt
gagcgtttttcgtctccgtctgacgccggctcagttctgattgctacagatgttgcggct
cgcggtcttgatatcaaaggcattgactttgtggttcattaccacgtcccgcgcactgca
gacatgtacgtgcatcgctctggtcgtacagctcgtgcgggggcttctggtaagagcgta
ttgatctgtgcccctgacgaggttgttggtatggcccgtcttgtggccaaagtccatgca
caggcagaggccaagaaatctaccaaccgcaacccccttgaatccctggagcttgatcga
cgagttgtctcacgtgtcaagccacgtatgtcactggccaaaaagatcacagaatccaca
atcgccaaagagaaaatttcgtcagaggacaactggcttcgaaacgcggcggaggaactg
ggcgtggattacgacagcgaggaattcgagaaacaagggagcaaagccaaaggacgcggt
cgtggtggtggacgttcgcaaaaggaaaaggaagctggcagtataagcaaggcagagatg
gccggcatgaaggcagagttgaaagagttgttgtcaaaacgtatcaatatcggcgtgagc
gagagatacattacggcagggcgcgtcgatgtagaggaattgttacgcgaacaagggaac
aataagtcatttataggcttgttagataagctcgaattttag
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