Talaromyces rugulosus: TRUGW13939_05957
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Entry
TRUGW13939_05957 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
trg
Talaromyces rugulosus
Pathway
trg03440
Homologous recombination
trg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TRUGW13939_05957
03460 Fanconi anemia pathway
TRUGW13939_05957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trg03032
]
TRUGW13939_05957
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_05957
Enzymes [BR:
trg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TRUGW13939_05957
DNA replication proteins [BR:
trg03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
TRUGW13939_05957
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
TRUGW13939_05957
Bloom's syndrome complex (BTR)
TRUGW13939_05957
FA (Fanconi anemia) pathway
TRUGW13939_05957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
55993453
NCBI-ProteinID:
XP_035345007
UniProt:
A0A7H8QXL6
LinkDB
All DBs
Position
III:join(3164406..3164823,3164876..3168420,3168479..3168557,3168608..3168943,3168995..3169275)
Genome browser
AA seq
1552 aa
AA seq
DB search
MTKNNLRQHLSWLLNRGLPDFASVDALTRPDPNLVVSNPGAPIVQPPNRSVHQETLNGIN
PVDDIQDGWPQVNLKRDEDFPTDDPEMARLHLIPSSETKSRLLSSSRKSRSITPTTPTSR
KNGESDSPQFKDLKKNAVQASPSKIKKRKTPSKRTGGLFLSSDFKSPFDDFDVESIDLTG
DGEQHATSSATAETFEEPKPLWREDFAARAEPLSTRSKKRKSDEYQSDLVSPRKMSHHAK
ASGTPSKARVLDAGTSPTLQRVSARSARESPRALASRSPVRPAVSASRASTRDVFDNSDV
DNDEESLLQYPDLPKTAHTEEQLSPSPSKRSKQRQQVTPAPQLKKSASTGLSFQNSSQRA
KAVVEPVATTPLSQASKDPKVEAFVELHPTVIDSAVKKLNRDLVANADIVVQYAMEGDQP
PAELLASNKSSRSKIDALGKLKMERTTYDQRKDRKNNLKAIMVRAVASGGDLSGVAAEVN
ESQAIMKELQQIEAQMSNLLALIDLDLSTFPAAASSDNPSNSQANPPREAFPSGPRVQAV
RQELGYNASPVARNTTPQTSASSVNNSFNFNDTRSTYQNRDVTMNDGDYDYDRPTNPFAP
NSNDMDEFDFDAEDDDLFEAANDLSNMDSHPFMDDNRSLGRKVFGETSGNAGRIPTPKKN
TADSSAMMSHAWSKDVKTVMRDRFHLKGFRPNQLEAINATLSGKDAFVLMPTGGGKSLCY
QLPSVVNSGRTKGITVVVSPLLSLMEDQVEHLKKLNIKAHYINGDVSAEHKRWIASTLRS
PYADREIELLYVTPEMVNKNLSLQDTLKTLHRNGKFARLVIDEAHCVSQWGHDFRPDYKE
LGSLRAEFEGIPVMALTATATQSVKVDVIQNLGMTGCDIFTQSFNRPNLTYDVLPKKGTA
SDIHAQIADIIKTSYKGKAGIVYCLSRKDCETVAEQLRTEHRVKAMHYHAGMSSEDRSAV
QRDWQSGKHHVIVATIAFGMGIDKPDVRFVVHHTIPKSLEGYYQETGRAGRDGKRSGCYL
FYSYKDTTQQRRFIDQGDGDWRQKNRQRQMLRNVVQFCENKSDCRRVQILAYFNESFRGE
DCHGTCDNCKSDATFENRDFSNDAKKAVELVRIFEQNNEDVTVLHCIDIFRGSGKKMKKE
HSQMPFYGAGSHIELGDVERLFYRLISDEALQEISKIKARFTHQYVKPGRNAQHVISGQQ
RVQMPVMSSKATTGPSRSRKATKTTSTGAMDDHPQSTMVPSPTQRRRAVRKANPKRTAGN
GSDDDDSDGFEPIRVAGASNRRKKPEVGPPITQNDQLSNLDDIRRMVAEEFMANAKDLCQ
KIMMEKQLRGQPFTDMVLREMAIKLPQNMTQMLALEDVERDKVERYGSRFLKLTQTSKAF
LLDMQRNQETNNEVVHDPNHTNVIDISSDEYGFSDDDDEIFASLSQIPNDESITSRYFDS
APNSRSSRGGNFVRPSDTQLTDLDGPTAPRRGASKSARGSRATGKRAVSGASGGRKKAAG
PAKRNFSGGSQRAKRTSKGSSSGRAASGGASSRRGGKSTASQSSSRIAMMPT
NT seq
4659 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagaataacttgcgacaacacttgagttggctcctcaatcgtggtttaccagac
ttcgcttctgttgatgcgttaacgcgacctgacccgaacctggttgtttctaatccgggc
gccccaatagtgcaaccgccaaacagatctgttcaccaagagactttgaatgggatcaac
cctgtggatgatatacaagatggatggccgcaagtgaatctcaaacgtgacgaggatttc
ccaaccgacgacccggaaatggcacgacttcaccttatcccctcgtctgaaacgaagtca
cgcctgcttagctcttcgcgcaaaagccgttcaataactcctacgacgccgacttctcgt
aagaatggtgaatccgatagtccccagtttaaggatcttaaaaagaacgcggtgcaagca
tcgccgtcgaaaatcaagaaacggaaaacaccctccaagcgaacaggcggcctttttctt
tcctcggatttcaaatccccattcgatgattttgatgttgaatctatcgaccttacgggc
gatggcgaacaacacgcgacttcttctgctacagctgagaccttcgaggagcccaagccc
ctatggcgcgaagactttgctgcgcgtgcggagcctctctcgacgcgcagcaaaaagaga
aagagcgacgaataccagtcagatctagtgtcccctcgaaaaatgtctcatcatgcaaag
gcctctggaacgccgtccaaggcccgcgtgcttgacgctggtacttcccctacattgcaa
cgtgtatccgccaggtctgcaagggagtcaccgcgtgctttggcttctaggtcgccagtt
cgtccagctgtctcggcttcaagggcctcgacaagggacgtttttgacaactcagatgtt
gataatgatgaagagagcttgctacagtatcctgatttgcctaaaacggcccacaccgaa
gaacagttgtcaccttcaccttccaagaggtcgaagcaaagacaacaagtcacgcctgcg
cctcaattgaagaaatcggcctcgacaggattgtctttccagaattcatctcaaagagca
aaagctgttgtcgaaccagttgctacgacccctttatctcaggcaagcaaagatccgaaa
gtagaagctttcgtggagttgcaccctacagtgatcgattcagcagtcaagaagctgaat
cgagaccttgttgcgaacgcggacattgtggtacaatacgccatggaaggagaccaacca
ccggcagaactattggcctcgaataaatcttctcgctccaaaatcgacgctcttggaaaa
ttaaaaatggaaagaacgacgtacgaccaacggaaagacaggaaaaataatctcaaggcg
atcatggttcgagctgtggcaagtggaggtgacttgtcaggagtagcagcggaagtcaac
gaaagccaggccattatgaaagagctccaacagatcgaagcccaaatgagcaatctgctg
gcccttatcgatctggacctatccacgtttccggccgctgcaagctcagataacccaagc
aactcgcaggccaatccgccacgcgaagcgttcccttccgggcctcgtgtccaagctgtt
cgtcaagaactaggttataatgcttcgcccgttgcacggaataccaccccgcagacatct
gcttctagtgtcaacaactcttttaatttcaatgacacccgttctacttaccagaatagg
gatgttacaatgaacgatggtgactacgattatgatcgtcccactaatccgtttgctccc
aattccaatgatatggacgaattcgacttcgatgctgaagatgatgacttgttcgaggcc
gctaatgacctatcaaacatggattcgcatccattcatggacgataatcgttctttaggc
cgcaaggtctttggggaaacttcgggaaatgccggtcgtattccgactcctaaaaagaac
acggctgactctagtgccatgatgtctcatgcttggtcgaaggatgtcaaaacagtgatg
agagaccgatttcatttgaaaggctttcggccaaatcaactggaagcaattaacgccact
cttagcgggaaggatgctttcgttctgatgcctactggaggtgggaagtcgttgtgctat
cagcttccgtcagtggtgaacagtggccgcacgaaagggattactgtcgtagtatcacct
ttactaagtctgatggaggatcaagtcgaacacttgaaaaagttgaacataaaagcacac
tatatcaatggagatgtgagtgccgagcataaaagatggatagcgtcgactctcaggagt
ccttatgcggatcgagaaatagagctgctttatgtgactccagaaatggtgaacaagaac
ttgagccttcaggacacgctcaaaacccttcatcgcaatggaaaatttgcacgccttgtt
attgatgaggctcactgcgttagccaatggggccacgacttccgtccagactacaaagag
cttgggtcgctccgcgcagaattcgaaggtattcctgttatggcgctgactgcaacggca
actcaaagcgtcaaagttgacgtgattcagaacctgggaatgactgggtgtgatatcttc
actcagagctttaatcggccaaatcttacctacgatgttctaccaaagaagggcactgca
tcggacatccacgctcaaatcgcagacatcatcaagacttcatacaagggcaaggcaggt
atagtctactgtttatcccgaaaggattgcgagactgtcgcggagcagcttcgtactgaa
catcgcgtcaaagcgatgcattatcatgcgggaatgagttctgaagacagatcagccgtc
cagcgagactggcagtcgggtaaacaccatgtcattgtggcaactattgcgtttggaatg
ggaattgacaaacctgatgtccgcttcgtcgttcatcacaccattcctaaaagcttggag
ggatactatcaagaaaccggtcgtgcaggaagagacggcaaacgatctggctgttaccta
ttctacagctacaaggatacaacccaacaacgacgcttcattgaccaaggagatggtgac
tggcgacaaaagaatcgccagcgtcagatgcttcgaaacgttgttcaattctgtgagaat
aagagtgattgccgcagagtccagattcttgcctacttcaacgagtctttccgcggtgaa
gactgccatggaacatgcgacaactgcaagtccgatgctacttttgaaaatcgcgacttc
agcaatgatgcaaagaaggccgtggagctcgtaaggatatttgagcaaaacaacgaagat
gtcacggtactacactgcattgacatatttagaggttctgggaagaagatgaaaaaagag
cattcccagatgccattttatggtgctggctcccacattgagttgggagacgtagaacga
ttgttctacaggctgattagcgatgaggctcttcaagagatatctaagatcaaggctaga
tttacacatcaatatgttaaacctggccgcaacgcccagcatgtcatttcgggacaacaa
cgcgttcaaatgcctgttatgtcctccaaagcaaccacaggtcctagtcggtctcggaaa
gcgaccaagactacatcaactggagccatggacgatcacccacaatctacaatggtccca
tcccccacacagcgtcgacgggcagtacgcaaagcgaaccccaagaggactgctggaaat
ggaagtgatgacgatgatagtgacggttttgagcctatccgggtagcaggagcatcgaac
cgacgcaagaagccagaggttggacctcctatcactcaaaatgatcaattatcgaacttg
gatgatatccgtcgaatggtggcggaggaatttatggcgaatgccaaagacttgtgtcaa
aagatcatgatggaaaaacaactacggggccaaccgtttacagatatggtactccgcgaa
atggccatcaagcttcctcaaaacatgacacaaatgctcgccctagaagatgttgagcgg
gacaaagtcgaacgttatggatctcggttcttgaaattaacgcaaacctcaaaggcattc
ctattagacatgcagagaaaccaggaaaccaacaatgaagttgtccatgatccaaatcac
acaaatgtcatcgacatcagcagcgacgaatacggatttagtgacgacgatgatgagatc
tttgcttcgctttcacagatacctaatgatgagagcatcaccagtcggtactttgatagt
gctcctaacagtcgatcctctagaggtggtaattttgtgaggccgtctgatactcagctg
actgatcttgatgggccaactgctccgcgtcgaggagcatcaaagtcagctcgcggttct
cgagcaaccgggaaacgcgccgtctccggtgccagtggtggaagaaaaaaggctgcaggt
cccgcgaaacgcaatttcagtggcggcagtcaacgagcaaaaaggacttccaagggcagc
agttctgggagggccgcttcagggggcgcgtcatctagaagaggtggaaaatcaaccgcc
tctcaatcttcatcccgcattgcgatgatgccgacgtga
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