Talaromyces rugulosus: TRUGW13939_06072
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Entry
TRUGW13939_06072 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
trg
Talaromyces rugulosus
Pathway
trg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TRUGW13939_06072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_06072
Enzymes [BR:
trg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
TRUGW13939_06072
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TRUGW13939_06072
Prokaryotic type
TRUGW13939_06072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
55993568
NCBI-ProteinID:
XP_035345122
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All DBs
Position
III:complement(join(3477937..3478311,3478376..3478832,3478894..3479246))
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AA seq
394 aa
AA seq
DB search
MASLKRGANQLSGNAAKKPKANSSITSFFGAPKPKENGTAAAAPPSSSRFNKEKWVSSLT
AEQKELLQLEINTLDESWLAHLKDEVVSPEFLNLKRFLKKEKDSGVTIFPPESDIYSWSR
YTPLHTVKAVILGQDPYHNHNQAHGLCFSVRPPTKAPPSLKNIYKGIKNDYPSFEIPAND
GLLTPWAERGVLMLNACLTVRAHNANSHANRGWERFTQKAIDIVARVRTHGVVFLAWGSP
AGKRVAGVNKQKHCVLQSAHPSPLSAHHGFLVNRHFQKCNEWLSERYGQDSMIEWSLNPK
KPVLTRKSADQQQVIEPLADSKQANKKPIDPADQKDDKTNNVEDAAVDLLCDEDDLDALE
ALAAAENDIPPPAVAAEKKSSEEEDKSEPKSDSN
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctcaaacgcggcgccaatcagctctctgggaacgctgccaaaaagcccaaa
gccaactctagcatcacatctttctttggagctcccaagccaaaagagaacggaactgct
gctgctgcacctcccagtagctctcgattcaacaaggaaaaatgggtatcctccttgact
gcagagcaaaaggagttgttacagcttgaaatcaacaccctcgatgagagctggctggct
catctaaaggacgaagtcgtctccccggaatttctcaacctgaaacgctttctcaagaaa
gagaaggattccggggttactatcttccctccagagagtgacatttattcatggtcccga
tacactcctctacacacagtcaaggcagtcatcctcggccaggacccctatcataaccat
aaccaagcccatggactctgcttctcggtccgccctccaacaaaggcccctccatctctt
aaaaacatctacaagggaatcaaaaacgactacccatcgtttgaaatccccgccaacgac
gggttgttgacaccctgggctgagcgaggcgttctcatgctcaacgcttgtttgaccgtg
cgcgcccataatgcaaacagtcacgcgaaccgtggctgggaaaggtttacgcaaaaggct
attgacattgttgcgcgagtgcgcacacatggcgtcgtgtttttggcctggggctcgccc
gctgggaagcgggttgctggagtcaacaagcagaaacattgcgtgttgcagtctgctcac
ccaagtccgctgagcgcccaccatggattccttgttaaccgccatttccaaaaatgcaac
gagtggctctccgaacggtacggacaagactcgatgatcgaatggagcttgaacccgaag
aagcccgtcctgactcgaaaatctgcggaccagcagcaggtcatcgagcctctcgctgac
agcaagcaagctaacaaaaagccgattgaccctgccgaccaaaaggacgacaagactaac
aatgtggaggacgctgctgttgatttgctgtgtgacgaggatgacctcgacgcactcgag
gctttggctgccgctgaaaacgatattcctcctccagcggtggctgctgagaagaagtct
tcagaagaagaggataaatcggagcccaagagtgacagcaattag
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