Talaromyces rugulosus: TRUGW13939_06370
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Entry
TRUGW13939_06370 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K14962
COMPASS component SWD2
Organism
trg
Talaromyces rugulosus
Pathway
trg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TRUGW13939_06370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_06370
03036 Chromosome and associated proteins [BR:
trg03036
]
TRUGW13939_06370
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
TRUGW13939_06370
Chromosome and associated proteins [BR:
trg03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
TRUGW13939_06370
COMPASS/SET1 complex (yeast)
TRUGW13939_06370
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
TRM82_WD
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
PAC11
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
DSE1_N
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_EML
Beta-prop_SPT8
NBCH_WD40
Beta-prop_RIG_2nd
WDCP
Beta-prop_WDR19_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
55993865
NCBI-ProteinID:
XP_035345416
UniProt:
A0A7H8QZW8
LinkDB
All DBs
Position
III:join(4629028..4629201,4629261..4629483,4629540..4630318)
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AA seq
391 aa
AA seq
DB search
MADVAPPPEQQDQKVSGAASSDTPQVGTPLGPPPVPRSATPQPSQKVSDVIPIYRASKRF
RLSKHDSSHITSLDFDDKGEYIVAACEDETIQVFDVIEGKNTKVVPSKKYGVHLARFTHH
SRQILHASTKVDDSLRLLDLHQESYLRYFSGHTDKVTSLALSPGTDAFVSCSKDNSISLW
DLRSRNVQGKLQLATPYLVAFDPTASVIAIASQSTSSVLLYDFRNYDRAPFATFDLVPHE
ERYTPATRGRLWSRLEFSNDGKNLLVGTDYHGHFVLDAFEGTLNAFLGGRKGSSGRAAPI
SSSGKPLGQGDACFTQDGRYIVGGAGEQTEVHVWDTHQISDTGAYLQPTIILPSRARTAV
IEMNPRYNMLATADKDIQFWLPDEGVKSSDK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtcgcaccgccgccagaacagcaggaccaaaaggtttctggcgctgcctct
tccgacacaccacaggtcggcactcctcttggtccgcctcctgtgcctcgctctgctact
ccccagccgtctcagaaggtgtcggatgtcataccaatttaccgcgcatcgaaacgcttc
agactttcgaagcacgacagctcccacattacttctctcgatttcgacgacaaaggagaa
tatatagtagctgcctgcgaggacgagaccattcaagtttttgacgttatcgaaggcaag
aatacgaaagtggtccccagcaagaaatatggagtgcacctcgcccgctttacccaccat
tcacgccagatactccacgccagtactaaagtggacgactctcttcgtcttctagacttg
catcaagaaagttaccttcgatatttcagcggacacacggacaaggtgacatcgctggcg
ctgtcacccggtactgacgccttcgtatcatgctcaaaagacaactcgatttctctttgg
gatttgaggtcccgaaatgtgcagggaaagctccagctagcgactccgtatttggttgct
tttgaccccacggcttccgtgatcgccattgcctcccagtcgacctcttcggtcttgctc
tacgatttccgtaactacgacagagccccctttgccacctttgacctggttcctcatgag
gaacgatatacaccagcgactcggggaagattgtggtcgcgtttagagttttccaacgat
ggcaaaaaccttctcgtcggcaccgactaccacggccattttgttctagacgcattcgag
ggcacattgaatgctttcttgggtggcagaaaaggatctagtggaagggcggcccccata
tcgagctctggaaagcccttgggtcaaggtgatgcttgtttcacccaagatggccgatat
atcgtaggaggggctggtgaacagaccgaagtccacgtatgggacactcaccagatttca
gacacgggtgcgtatttacagcccacgattattttgccgtccagagcccgcacagccgtg
atcgaaatgaatcccagatacaacatgcttgcaaccgccgacaaagatattcaattctgg
ctacctgacgagggggttaaatcttccgacaaataa
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