KEGG   Talaromyces rugulosus: TRUGW13939_06611
Entry
TRUGW13939_06611  CDS       T06879                                 
Name
(RefSeq) uncharacterized protein
  KO
K12830  splicing factor 3B subunit 3
Organism
trg  Talaromyces rugulosus
Pathway
trg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:trg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TRUGW13939_06611
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:trg03021]
    TRUGW13939_06611
   03041 Spliceosome [BR:trg03041]
    TRUGW13939_06611
   03036 Chromosome and associated proteins [BR:trg03036]
    TRUGW13939_06611
Transcription machinery [BR:trg03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     TRUGW13939_06611
Spliceosome [BR:trg03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    TRUGW13939_06611
 Complex B
    TRUGW13939_06611
 Complex C
   U2 SnRNP specific factors
    TRUGW13939_06611
Chromosome and associated proteins [BR:trg03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     TRUGW13939_06611
    TFTC complex
     TRUGW13939_06611
SSDB
Motif
Pfam: Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7
Other DBs
NCBI-GeneID: 55994106
NCBI-ProteinID: XP_035345655
UniProt: A0A7H8QZS4
LinkDB
Position
III:complement(join(5277756..5277782,5277831..5279115,5279260..5281366,5281522..5281765))
AA seq 1220 aa
MATTSNMFMYSLTIQSPTAVTQAILGQFAGTKEQQIVTASGSKLTIHRPDAAQGKVTPIY
TQDVFGIIRSLAVFRIAGSNKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRR
VVPGQYLAVDPKGRACLIASAEKNKLVYVLNRNAQAELTISSPLEAHKPQTIVFAMIALD
VGYDNPIFAAIEVDYSESDQDPTGHAYEEIEKLLVYYELDLGLNHVIRRWAEPVDRTASL
LFQVPGGADGPSGVLVGAEDSITYRHSNQDAFRVPIPRRSGPTENPERKRTVVAGVMHRM
RGAFFFLLQTEDGDLFKLTIDMVEDDNGQLTGEVRRLKIKYFDTVPVATNLLILKSGFLF
VASETGNHHFYQFEKLGDDDEEAEYTSDDFSADHTEPLSPVYFQPRGAENVNLVESINAL
NPVMDCKITDLTGDDSPQIYTACGTGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKV
TRNDEFDTYIVLSFTNGTLVLSIGETVEEVTDTGFLSSAPTLAVQQLGEDSLVQVHPKGI
RHILADHRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDTDGTLAEYDEKRQMS
GTVTSLSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTSAPSSLNIMS
MADSTSGGSTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGAKPVKLFRVSVKGQTAV
LALSSRPWLGYSDIQTKGFMLTPLDYVGLEWGWNFSSEQCLEGMVGIQGQNLRQVTNPFA
FIFLIFSIEKLDNNILQESIPLAYTPRHIVRHPDQPLFYVAEAESNVLSPATQARLLEDS
KLQNGEAVIPPAEDFGYPRATGHWASCIEVVDPVSTKSVVSRLELEDNESAVSIAAVPFA
SQDNETFLVVGTGKDVIVNPRSFTAGFIHIYRFLEDGKELEFIHKTKVEEPPLALLAFQG
RLVTGIGSDLRIYDLGMKQMLRKCQVQAAPKLIVGLQTQGSRIVVSDVQESVTYVVYKFQ
ENRLIPFVDDVIARWTTSTAMVDYETTAGGDKFGNLWLVRCPKKISDEADEDGSGAHLIH
ERAYLQGTANRLDLMVHFYTQDIPTSIQKTQLVVGGRDILVWTGLQGTVGMLIPFLGRED
VDFFQSLEMQLAAQNAPLAGRDHLIYRSYYVPVKGVIDGDLCETYFLLPSDKKLTIAGEL
DRSVREIERKISDMRTRVAY
NT seq 3663 nt   +upstreamnt  +downstreamnt
atggcaaccacatcgaacatgttcatgtattccttgacgatccaatctcctactgctgtg
actcaagctatactcggccaatttgcggggacaaaggagcagcagatcgtgactgcatcg
ggatcgaagctcacgatccatcgcccggatgccgcgcagggcaaggtcacgccgatctac
acgcaggatgtctttggcattatcaggagtcttgccgtatttagaattgctgggagtaac
aaagattacattataattggatccgactcgggtcgtatcaccatcattgaatacgtgcct
tctcaaaatcggttcaatcggatccatctagagacctttgggaaatccggagtcagacgc
gtggttcccggccagtatcttgcagttgatccaaagggaagggcatgcctgattgcctct
gcggagaagaacaagcttgtctatgttttgaaccgcaacgctcaggccgaattgaccatt
tcttccccgctagaagcacacaaaccacagactatagtctttgctatgatagccttggat
gtgggttatgataacccaatcttcgctgccatcgaggttgactattccgagtctgaccaa
gatccaacgggccacgcatacgaagagattgaaaagctcttggtatattacgagctggat
cttggtttgaatcacgttatcagaaggtgggcagagccggtggatcgaactgccagttta
ctcttccaggtccctggaggcgccgacggccctagcggtgtcctcgtaggggctgaggat
agtatcacttatcgacactccaatcaagatgcattccgcgtgccaatccctcgccgaagt
ggcccaacagaaaacccagagcggaagcgaaccgttgtagcgggtgttatgcacagaatg
aggggcgctttctttttcctcctacaaaccgaggacggcgaccttttcaagcttacgatt
gacatggtggaggatgacaacggccagctaactggcgaggtgcgaaggctcaagattaaa
tactttgataccgtccctgttgcaacgaaccttttgatcttgaagagtggtttcctattt
gttgccagcgaaactggcaaccatcatttttaccagtttgaaaagcttggtgacgatgat
gaggaagccgaatataccagtgacgatttttccgcagatcatacggaacctctgtcgcct
gtttactttcaacccagaggggcagaaaatgtcaacctggttgagagcatcaacgctttg
aacccggttatggactgtaaaattaccgatctcacaggggatgactcgccgcagatttac
actgcttgtggaacgggcgcgcgaagttcctttaggactctcaagcacggtctggaggtg
tcagagattgtagaatccgagcttcctagcgttccgtcggctgtgtggactacaaaagtg
acgcgtaacgacgagtttgatacatacattgtcctctcgttcacgaatggcacgttagtc
ctaagtattggagaaactgtcgaagaagtcacagataccggatttctatcgtcagcacct
acccttgctgtacaacaactcggagaggactctctagtccaggttcaccccaaaggcatt
cggcatattctcgctgatcatcgcgttaatgaatggcctgcacctcaacatcgatcaatc
gtcgctgctgccactaatgaacggcaagttgccgttgcgttgagctctggagaaatagtc
tactttgaaatggatacggacggtacgctggcagaatacgacgagaaacgacaaatgtca
ggcaccgtgacatctctgagtctaggtgaggttcccgagggtcgcgtccgaagctctttc
ttggcagttggatgtgatgattcgaccgtgagaattctcagtttggatccagactctaca
cttgagaacaagtccgtgcaagctctcacatcggccccgtcttccttgaatatcatgtcg
atggctgactccacctctggtggttcaacattgtacctgcacattggattatactctggt
gtatacctgagaacagtacttgatgaagtgacgggcgaactttcagacacgcgaactcgg
ttcttaggtgctaagcctgtcaagctctttcgagtttccgtcaagggacaaacggcggtg
cttgctctcagctctcgtccatggcttggatattcggatatccaaaccaaaggattcatg
cttacaccactagattatgttgggctcgaatggggctggaacttttctagtgagcaatgt
ctcgagggcatggtggggatacaggggcaaaacctgaggcaagtaacaaatccctttgcg
tttatctttctaatcttctctatcgaaaagttggacaacaatattcttcaagaatctata
cctctcgcatacacgccacgacacattgtgagacatcctgatcaaccgcttttctatgtc
gccgaagccgagagcaatgttctttccccggcgactcaggctcgtttgttagaagactcg
aagctacaaaatggagaagccgttattcctccagccgaagacttcggctacccacgagct
accggtcattgggcctcttgtattgaagtcgttgatccggttagcacaaagtctgtagtc
tcacgtctggagctggaggacaacgagtctgctgtcagcattgcggctgtaccgttcgca
agccaggacaatgagaccttcctggtggttggcaccggcaaagatgtcattgtcaatcca
cgatcttttactgcaggattcattcatatctaccgtttcctagaagacggcaaggagctt
gaattcattcacaaaaccaaggtggaagaaccacctctcgctcttctcgcattccaggga
cgtctagttactggcattggatcggatcttaggatttacgaccttggcatgaagcaaatg
ctacgaaagtgccaggtccaagcggcacccaaactcattgtcggcctacagacacaaggt
agccgtatagtcgtgagcgacgtgcaagaaagcgtgacgtatgtggtgtacaaattccaa
gagaaccgactgattccattcgtggatgatgtcattgcacgttggacaacgtcgaccgcc
atggtggattacgaaacaacggcaggaggcgacaaattcggaaatctatggcttgtccga
tgcccgaaaaagatctcagacgaagccgacgaagatggctcaggcgcgcacctcatccat
gaacgagcgtacctccaaggcacggcgaaccgactggacctgatggtgcacttttatacg
caggatattcccacaagcattcaaaagacacagcttgtggttggcggtcgggatattctt
gtctggaccggtcttcaagggacggtggggatgctgatcccatttcttgggcgtgaagac
gtcgatttcttccagagtcttgagatgcaactggctgcacaaaatgcaccgctggctgga
cgagaccatctcatctaccgaagttactacgtgccggtcaagggcgttattgacggtgat
ctttgcgagacatatttcttgcttcctagcgataagaagctgacaattgcgggcgagctg
gatcggagtgtccgggagattgagcgaaagatatcggatatgagaactcgggttgcttac
tag

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