Talaromyces rugulosus: TRUGW13939_06624
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Entry
TRUGW13939_06624 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
trg
Talaromyces rugulosus
Pathway
trg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TRUGW13939_06624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trg03009
]
TRUGW13939_06624
Ribosome biogenesis [BR:
trg03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
TRUGW13939_06624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BP28CT
U3snoRNP10
HEAT_HEATR1
Tti2
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
55994119
NCBI-ProteinID:
XP_035345668
UniProt:
A0A7H8QZG7
LinkDB
All DBs
Position
III:complement(join(5314493..5314929,5314981..5319572,5319627..5320003))
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AA seq
1801 aa
AA seq
DB search
MASSLSAQLAQIASTSTNPLDLKAQQVAHSKSLIFDSKTAKSQDFHTVYEICHEGFRELC
QLDTRFTEFDRTIFSPHSKTEDRSEMTAAQNKDLDAVLESFMALVGGRLQLTPAIAALDW
LVRRFRVHEFNTGFLILTFLPYHSLPIFLSLLNILPENLSSAFNYLVPYKKSRINPPRDA
IIRTAVKNKDFSMALNNYTIQVSKQKAHYHGLLVFWSGITMQACSEMLDSARSGRRDVEK
KNHEDIFMRLLPVLNNGLAMKKVSELTIGCYMIIVVFGTKAALTEDVINTLMTAVSGSWT
QETVNSAMVTLAVLAEQKDESSLPKKVVHSFLKLDKPVDLLADVATQYKTTGLLLGLIAG
CLVEMRKNALQSGIEFISSVFERGLLDETASKSALKMILDTTLDSRQKGDLSLDLQTQVS
EFVQTLNISNTYRPLLQAVTAESDMDIDNLEHSLQLTIEAKPALPPTEDVEMADAEEQEV
DTFTPLLQSLTKEPFASSSFLTERTEPIFERLTQALTLALDAPEKWEQVCSLPVLGKAHL
AKSPQYISFFVRLFSGPYSVRLRAAALKTISASLEAADSVVDMQALVPYIIAALADPSKA
LRTETAKLVETLFQIQRKAKKEDSVAIWAQDTLYTQTKQSSPAWMPTRDLQKIIDAVLLT
GLEGYVQDHTYIVSTLQRTLKGSNTQSNEESATDLKKSLRQSFLSFLCSHVVFTPVYAVK
LRLLKIVNGVDKIGSMTRTKDLSPLVEKWRALSEAEVSDICTAENLFRAELEQEIVASVS
AKDKDAENVLLSNVEKSTDGTRPSFVSAVFARIAQIWNKFSPERQVSTSRHIFDLSFNGS
VIIQGDARDTLRNVQLPGTILTEFLEKIPELVATLEGHSPSPKRRRTNQNNAVSASVSSA
ELNEAVEKVTYILELVDSSIPDEHPEITPSLFKALAALHLLKSRIESGLGYLLSLALGSL
LAIVNKSKSSSKPLFDTSAIRADLVVDCVRTTESPQVQNTALLLVSSLAVIAPEQVLHSV
MPIFTFMGSSVLKKDDDYSVMVIDQTINQVVPVLVQSLRNQKRDVVAGTSDLLLSFTAAF
EHIPSHRRQRLFQALVTKLGAQDFLFAVLAMLANRHGLDKNVSSLVTSIVNNLDPQVQLI
SYQKYLNLVSDCLKPKPGISSVLLGIGNEGADDKYVVTETLLRSLAHFFKNPALGSQMKA
IFDSDDEEKTAVVGTLFSQILEQVLALADAVRDVKPVSNACSEVLASVLGVLSLVDFLDT
VEQLLQRPSADVRRKVLRLLETRLRQSPERDGASQNRVLDFIVFLVDIIKSSDDTLLKHA
AVACIDRIAEKYGRKDPEKVVPAAMVIASDACIGQKDNKIRVMGVLCLASVAEVLGEAVI
PTLPETLKRSLSLLEVSMEKETVNEPLHNAVFSLLSALLVQVPYMMSSKNLDKILELSFK
SAELELSAEGDDARRDTLKLIAKKVDVKDSFSAVERKWAVATTSGSVATKEALDIISLAI
DKHPKSDTVKNVGILTKLLHKAFDLRREQPSAPEDSQFEEPELDAIESIVNSLAIKMIYK
LNDTVFRPLFMDLVQWATNGLSKADTEGRLLRLTSFYKFLQTFFSTLKSIVTSYSSYILD
NSIEVLKISKPSSKESKDLWLAAVRTLISAFEHDQDGFWQSPSHLSGVSEALISQLPRAT
NSSTAAAIISEVVPAISELAVAADSPDNYKEMNTAIMKYLRPSTSAAADGGDSPHTRLAA
LKAEQALTERLGEEWLALLPEMLPYISELMEDEDETVEKEARKWVKSIEEVLGEKLDDML
T
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcgctctccgcgcagttggcgcagattgcgtccacatcaacaaatcctctt
gaccttaaggcgcaacaggttgcccactcgaaatctttgattttcgacagcaagactgca
aagtcgcaagatttccataccgtttacgaaatatgtcacgaaggctttcgagagctgtgt
cagttggacactcgattcacagaattcgatcgaacaattttcagtccgcacagcaagacc
gaagatcgatcggagatgactgcagcccagaacaaagatcttgatgccgttttggaatca
ttcatggctttggttggcgggaggttacaactgactccagcgatcgcagcgttggattgg
ctcgtgagacgattccgtgttcatgagtttaataccggtttcctcatcttaacctttctt
ccataccattcgcttcccatttttctcagtctactgaacattctaccggaaaacctgtca
tccgctttcaattacctcgttccttacaaaaaaagtcgcatcaatcctcctcgagacgct
atcatccgtaccgctgtcaagaacaaggatttttccatggccctcaacaactataccatt
caggtatcaaagcaaaaggcccactaccatggtctgctcgttttctggtccggaatcacc
atgcaagcatgttcggaaatgctggattccgctcgctcgggccgtcgcgatgtcgagaag
aaaaaccatgaagatatcttcatgagacttttgcccgttcttaacaatggtttggcaatg
aaaaaggtctcggaactgacaattggctgctacatgataattgttgtgtttggcacaaag
gctgcgctcacagaagacgtgatcaatactttgatgactgcagtctcagggtcttggacc
caagaaactgtcaattcggccatggttactctggcggttctggccgagcaaaaggacgag
tcttctctaccaaagaaagtcgtgcactcatttctgaagctcgacaagcccgtcgacttg
ctagccgacgtcgctacacaatataaaaccaccgggcttcttttgggattgatcgcaggc
tgtctggtcgaaatgcggaagaacgcccttcaatctggaatagaatttatatcgtccgtg
tttgagcgtggcctgttggatgaaactgcaagcaaaagtgctttgaaaatgattctggac
accacattggattctcggcaaaaaggcgatttatctctggacctccaaacccaagtttcc
gaattcgtccaaactttgaatatttccaatacctatcgccctcttttgcaagctgtcact
gctgaatcagacatggatatcgacaacttggaacacagcttgcagctcaccatagaagcg
aaacccgcacttccaccgacagaagacgttgaaatggcagacgcagaagagcaggaggtt
gacacgtttacacccttgcttcaatcattaaccaaggaaccttttgcttcgtcttctttc
cttaccgaacgaactgagcctatttttgaaaggctgacacaggctttgactctcgcactg
gatgccccagaaaaatgggaacaggtctgcagccttccagttcttggaaaggcccatctg
gccaaaagcccccagtatatatcctttttcgtccgtttgttttctggcccatattcagtt
cgtcttcgtgctgctgcgttgaaaactatttctgcatcgttagaagcagccgactctgta
gtcgacatgcaggccctagtcccttatattattgcggccctggcagatccatcaaaagca
cttcgaacagaaaccgccaagcttgtcgagacgctcttccaaatccagcgcaaagccaag
aaagaagacagtgtcgccatatgggctcaagacactctttatacgcaaacaaaacaatct
tctccagcgtggatgccaactcgcgacttacaaaaaataatcgacgctgttttgttgacc
ggattggaaggttatgttcaggaccacacctacattgtatccacgttgcaaaggacgctg
aaaggatcaaacactcagtcgaatgaagagtctgctacagatttgaaaaagtcactgaga
cagagtttcctgtcgttcttgtgttctcatgtggtcttcacaccagtttacgcggtcaag
cttcgactcttgaagattgtaaacggcgtggacaagatcggctcaatgacaagaaccaag
gatttgtctccgctggttgaaaaatggcgcgctctctctgaggccgaggtttcggatatc
tgcactgcagagaatcttttccgtgcagagctggagcaggagatcgtcgccagtgtcagt
gccaaggacaaggatgcagagaatgtgcttttatctaatgtcgaaaaatcaacggatggg
actaggccaagctttgtatctgcagtgttcgcacgcatcgcacagatatggaacaaattc
agcccggaaagacaagtctctacatcacgccatatcttcgacctatctttcaatggcagc
gttataatccaaggcgacgcaagggacacacttcgtaacgtgcagctccctggcactatt
ctcaccgagtttctggagaaaatccccgagcttgttgctaccttggaaggccacagcccc
tctccaaagaggcgtcgcacaaatcaaaacaatgctgtttcagcatctgtgagctcggca
gaattgaatgaagcggtagaaaaggtgacatacatcctcgagctcgtcgacagctcaatt
cctgacgagcaccccgaaatcactcccagcttgttcaaagcattggccgctcttcacctt
cttaaatcccgcattgaatcaggcttggggtatcttctaagtctggctctcggcagcctg
ctggcaatcgtcaataagagcaaatcatcatcaaagcctttgttcgatacttcggcaatc
cgggctgacctggttgttgattgcgttcgtacaacagaaagcccgcaggtgcaaaataca
gctttgctgttggtttccagtcttgctgtaattgcccctgagcaggttctgcacagtgtg
atgcctattttcacgtttatgggttcgagtgttcttaagaaagacgacgactactcggtt
atggtaattgaccagacaatcaaccaagttgtccctgttcttgttcaatcgctacgcaac
cagaaacgcgatgtggtcgccggcacgtctgacttgctgctcagctttactgccgctttc
gagcatattccgtcccatcgccgacagcgactattccaagccttggtcacgaagcttggc
gctcaagactttttatttgccgtccttgccatgcttgcgaaccgtcatggtctcgacaag
aacgtgtctagcttggtgacaagcattgtgaacaacctagacccacaagtccaactcatc
agctatcagaaatacttgaacttggtcagcgactgcttgaagcccaagcctggcatctct
agtgttctcctgggaattggaaatgagggggccgatgataaatatgtcgttacggagact
ctacttcggtcgctggcacactttttcaagaaccccgccctaggatcacagatgaaagca
atctttgattctgacgacgaggagaaaacggcggttgtcggcactctgttctcgcaaatt
cttgaacaagttttggcattggcagacgctgttcgcgacgtcaaacctgtcagcaacgca
tgcagtgaagtcctcgcatctgtcttgggcgtcctgtctctggtcgacttcctcgacacc
gtcgagcagctcctccaacggcctagtgcagacgtgcgacgcaaggtccttcggcttttg
gaaacccgtctccgccaatctcccgagcgagacggtgcgtcacagaaccgggtcctggac
tttatcgtcttccttgtcgatattatcaaatcctctgacgatactctgctcaaacacgca
gctgtcgcttgcatcgaccgcattgccgagaagtacggacgcaaggaccctgaaaaggtg
gtgccagccgccatggtcatcgctagtgacgcttgcattggccagaaagataacaagatc
cgtgtcatgggcgtgttgtgtctcgcatcggtggcagaggttttgggagaggctgttatt
ccgaccctccctgaaacgctcaagaggtcgcttagtcttttggaagtcagtatggagaag
gaaacagtcaacgagcctcttcataacgctgtcttttctttgctctcggctttgcttgtt
caagttccgtatatgatgtcaagcaagaaccttgataaaatcctggagctttctttcaag
tcagctgaactcgagctgtccgcagaaggcgacgatgctcgacgcgataccttgaagctg
atagccaagaaagtcgacgtcaaggattcattcagtgcagtggagagaaagtgggctgtt
gcaaccacttcaggatccgtcgctaccaaggaggctcttgacattatcagtcttgccatc
gacaaacaccccaagtccgatactgtcaagaacgtcggtattctcaccaagctattacac
aaggcatttgatcttcgcagggaacagccatcggctccagaagactcgcagtttgaagaa
cccgagcttgacgcaattgagagcatcgtcaatagtcttgctatcaagatgatctacaaa
ttgaacgatacggtgttccgtccattgttcatggaccttgtccaatgggcgaccaacgga
ctgtccaaggccgacaccgagggccggctgctacgattgacctcgttctacaagttcttg
cagacattcttcagcacgctcaagtctattgtcactagctactctagctacattctcgac
aattctatcgaggtgctcaagatcagtaaacccagttcaaaggagtccaaagatttgtgg
ttggcggcagtgcgaacattgatctctgcatttgagcacgaccaagatggcttctggcaa
tccccgtcacacctcagtggcgtctcggaagcgctcatttcccagctcccacgagccacc
aactcatcgacagctgccgcgattatttccgaggttgtccccgccatttccgaactcgcc
gtggctgccgattctccggataactacaaggagatgaacactgcaatcatgaaatacctt
cgcccctcgacgtctgcagcggcagacggcggcgacagcccgcacacacgtcttgcggcg
ctgaaagccgagcaggcgctgacagagcggttgggcgaagagtggctagccctgcttcca
gagatgctgccatatatcagcgaacttatggaagacgaggacgagacggtggagaaagag
gctcgaaagtgggttaagagcattgaggaggttttgggagagaaacttgatgatatgttg
acgtag
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