Talaromyces rugulosus: TRUGW13939_06942
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Entry
TRUGW13939_06942 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
trg
Talaromyces rugulosus
Pathway
trg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
TRUGW13939_06942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_06942
03036 Chromosome and associated proteins [BR:
trg03036
]
TRUGW13939_06942
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
TRUGW13939_06942
Chromosome and associated proteins [BR:
trg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
TRUGW13939_06942
PBAF complex
TRUGW13939_06942
GBAF(ncBAF) complex
TRUGW13939_06942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF4200
AAA_9
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
55994435
NCBI-ProteinID:
XP_035345977
UniProt:
A0A7H8R0B6
LinkDB
All DBs
Position
IV:join(466652..466745,466805..467346,467396..468844)
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AA seq
694 aa
AA seq
DB search
MDEIQNVSTQPGDENQSGIAAQDVGDASQASASQPPQDSPIKNADEGSDNPLDAPASPRP
QDNDAEPEDEEMGGLESDTKKENGADETADGQGEGVSEEQSAQDKAALEASARDHLVSQT
HSIILPSYSSWFDMHQIHPIEKKAMGEFFNGRNRSKTPAVYKDYRDFMINTYRLNPIEYL
TVTACRRNLAGDVCAIMRVHSFLEQWGLINYQVDPQTRPSNIGPPFTGHFRAVADTPRGL
HPFQPGPNHVVTPGKPLAATDRAASATPAKADLNLEIRRNIYDDKGKEITPVEDKEKQTN
GDTPAPNGTSSESATKAMESAAREPRKVFNCWSCGIDCTRLRFHYAKSTPVSTNSNAPGN
KYDVCPSCFLQGRLPSSHNAADFVRLEEKEYTNIPDKDAPWSDAELVLLLEGIENFDDDW
HQIAEHVGTRTREECVMKFLQLEIEDKYVEDIDGPNDGTIRALQGRDPISQLDNPVLSVV
AFLAQMAEPSVAAAAAGRSVEQIRKELRSQLNKEAPEAEKGKDKGVEGLKTEDSMDVDIV
RQVESTGEKRESLSTVALAASAARAGALASHEEREMTRLVSAAVNVTLQKFEIKLEQFNE
MEEIIEAERRELEQARQQLFLDRMAFKKRVKEVQDALQATSLQAPGDETNQAINDAASAG
IGVRYQFNHPQADMRNGVQPLSAHPGADYKSLDL
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggatgagattcagaacgtttccacccagcctggtgatgaaaaccagtccggcatagct
gcccaagatgttggggatgctagccaggcctcagcgtcgcaacctccccaagactctcct
atcaaaaacgccgatgagggctcggataacccactagatgctcctgcatccccacggccc
caggataacgatgcagagcccgaagacgaagagatgggcggcctcgaaagcgacaccaag
aaggagaatggcgccgacgagaccgcagatggccaaggcgaaggtgttagcgaggagcaa
tcggcgcaggacaaggccgcgcttgaagcttccgcgcgcgaccatcttgtttcgcagacg
cattcgattatcttaccaagctactcaagttggttcgatatgcaccagattcaccctatt
gagaagaaagccatgggcgagttcttcaacgggcgcaaccgcagcaagactccagcggtc
tacaaggactatagagatttcatgattaacacttatcgcttgaatcctatagaatacttg
actgtgactgcttgccgtcgaaatcttgccggtgatgtttgcgctatcatgcgagtccat
tcttttctcgagcaatggggcttgatcaactaccaggttgacccacaaactcgcccttca
aacatcggtcccccatttacagggcatttccgtgctgtcgcagatacgccacgaggatta
caccctttccagcccgggcccaaccatgtagtgaccccgggcaagcctttggctgccact
gatcgcgctgcgtccgccacccctgcaaaggcagatcttaacctcgagattcggcgcaac
atctacgacgacaaaggcaaagagatcacaccggtcgaagacaaggaaaaacagaccaat
ggcgatactcccgctccgaatggcacatcctccgaatctgctaccaaagcgatggagagc
gccgcccgagaaccccgcaaggttttcaattgctggtcctgtggtatcgattgtacccgc
ctgcgcttccattatgccaaatccactccggtatccacaaactccaatgcccccggtaac
aagtacgatgtttgccccagctgtttcttgcagggtagacttccttctagccacaacgca
gcagactttgttagattagaggagaaagaatacaccaacattccagacaaggacgcacct
tggtctgatgcggaacttgtattgcttctcgaaggaattgagaacttcgatgacgactgg
caccagattgcagaacacgtgggaactaggacaagagaagaatgtgtgatgaaattcctt
caattagagattgaggacaagtatgtcgaggatattgatggacccaacgatggaacgatt
cgcgcactgcaaggacgggacccaattagccaacttgacaacccagttctgtcagtggtt
gctttcctcgctcaaatggccgagccatcggtcgccgctgccgccgcaggccgatctgtc
gagcaaatccgaaaagaactcagaagccagctgaacaaggaagcgcctgaagccgaaaag
ggcaaagataagggcgttgaaggcctcaagaccgaggactcgatggacgtggacatcgtt
cgtcaagtggagtcaacaggcgagaagcgcgaatctctctctacagtcgctctcgcagct
tcggccgcccgtgctggtgcccttgcttcccatgaagaacgcgaaatgacacgccttgta
tctgctgcagtcaatgttacacttcagaaattcgagatcaagctggagcagttcaacgaa
atggaagaaatcatcgaggccgagaggcgagaacttgagcaagcccggcaacagcttttc
cttgaccgaatggctttcaagaagagggttaaggaggtccaggatgcgctgcaagcaacc
agtttgcaagcccccggcgacgagaccaaccaagccatcaatgatgctgcttctgccgga
ataggtgttcgttatcaattcaaccatccccaggcagatatgaggaacggcgttcagcca
ttgagtgctcatcctggcgcagattacaagagtctcgatctttaa
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