Talaromyces rugulosus: TRUGW13939_07037
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Entry
TRUGW13939_07037 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K10754
replication factor C subunit 1
Organism
trg
Talaromyces rugulosus
Pathway
trg03030
DNA replication
trg03410
Base excision repair
trg03420
Nucleotide excision repair
trg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRUGW13939_07037
03410 Base excision repair
TRUGW13939_07037
03420 Nucleotide excision repair
TRUGW13939_07037
03430 Mismatch repair
TRUGW13939_07037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trg03032
]
TRUGW13939_07037
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_07037
DNA replication proteins [BR:
trg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TRUGW13939_07037
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TRUGW13939_07037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
RuvB_N
AAA_16
nSTAND3
AAA_28
AAA_30
AAA_33
NACHT
AAA_5
AAA_14
AAA_18
AAA_11
Motif
Other DBs
NCBI-GeneID:
55994530
NCBI-ProteinID:
XP_035346072
UniProt:
A0A7H8R2F8
LinkDB
All DBs
Position
IV:complement(join(762387..763012,763071..765352,765407..765485,765541..765565,765688..765768))
Genome browser
AA seq
1030 aa
AA seq
DB search
MPDIRNFFGAKPGQGANTSAKPAAAKEDPAAARKKRSRKVVDDSDDEVVEPKSPKPKPTK
KQPKKEEDLGEPTTTSEYFASSKKRGKPSNATDAKEPADSSVNGKSTPKKQQTPTKKSET
GRRAKPAAKVLEDDEGLGGDDIFATEYGKPRRGGDDDYVEQHDGSDSDDLIVKPATAKKG
KLEVEEEDDDVEMLTTPPAKARAGRKRKSEAVLDPDEVDEKPKKKAAAPKKAKATPKKDQ
PENKEIQDIFDNIPMVRPPTPPPTAPGEKPKFYLNAGRSRDPAGAGSVELPEGAENCLAG
LAFVFTGVLDTLGRDEGQNLVKKYGGKVTGAPSSKTSYVVLGNDAGPSKLKKIRDMNIKT
INEEGLFELIRRLPANGGSGKAAEQAQAKREAEEKKIKAMAEEMEQQERKKAQAQQPAAV
SSQTPSSSASSKPQSDNRLWTTKYAPTQMSMICGNKLQVERLQTWLRNWRTSAKRQFKMP
GKDGSGLYRAVMIHGPPGIGKTTAAHLIANLEGYDVVETNASDTRSKKLVEGGLLGVLDT
TSLQGYFSGDGKNVESQKRNLVLIMDEVDGMSAGDRGGVGALAAAAKKTNIPLILICNER
SLPKMKPFDHVTFELPFRRPTADMIRARLSTICFREGMKIPPHVLDSLIAGTGSDIRQVI
NMLSTVKLDQKTLDYDQGKELSKSWEKNVILKPWDIVSKILNAQMFSPSSKSTLNEKIEL
YFNDHEFSYLMLQENYLRTNPMLAGNYSGKERQLKLLELADNAASSISDGDLVDKMIHGS
QQQWSLMPTHAAFSFVRPASYMFGNLGGRPNFTSWLGNNSKQGKLNRFVKDIQGHMRLRS
TGDREEIRQQYMPVLWNKLVRPLMEVGKDSVEEVIDLMDSYFLTREDWDSLVELGLGPMG
DENVKIETQTKSAFTRIYNQRSHPLPYMKTSNALALKKDPKEKPDIEDTIEKSDEEDTAE
GAKEVDESEELDLKKDKYVKVPKAKAKAKAGASKGKKANGKGKKKEDDFLDDDEEDEQPK
KGRKGKAKAK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatatcaggaatttctttggcgccaagccaggccagggtgcgaatacttctgca
aagccagcagcggcaaaggaggatcccgcggccgcccgcaaaaaacgaagcagaaaagtc
gtcgatgacagcgacgatgaagttgttgaaccgaagtcgccaaaaccaaaaccaacgaag
aagcaacccaagaaggaagaggatttaggggagcccactactacatcagagtattttgca
tcgagtaagaagagggggaagccctccaacgcaacagatgccaaagaacctgcggactcg
tcagtcaatggaaagagtacgcccaaaaagcaacaaaccccaacgaagaagagcgaaacc
ggacgacgcgccaaacctgctgcgaaagtgctagaagatgatgaaggccttggaggtgat
gatatttttgcaactgaatacgggaagccccgccggggtggtgacgacgactatgtcgaa
caacacgatggaagcgactccgacgatctcatagtgaagcctgccacagccaaaaagggg
aagctagaggtagaagaggaagatgacgacgtcgaaatgttgaccacgcctcccgccaaa
gcaagggctggaagaaagcgaaagtcagaagctgtccttgaccccgatgaagttgacgag
aaaccaaagaaaaaagctgctgcacctaaaaaagctaaggctacaccgaaaaaagaccag
ccagaaaacaaggagatccaagatatttttgacaacatcccgatggtcagaccgccaacc
cctcctccaaccgcgccgggtgaaaagcctaaattttatttgaatgctggccgatcccgt
gatcctgcaggcgctgggtcagtggaactacctgaaggcgcagaaaattgccttgctggt
ctggccttcgtattcactggtgtgctggatactctaggtcgtgatgaaggtcaaaacctg
gtcaagaaatatgggggcaaggttactggggcccccagctcgaagaccagctatgtcgtt
ctgggtaacgatgccgggcctagcaagcttaaaaagattcgagatatgaatatcaaaaca
atcaacgaggaggggctctttgagctgatccgccgtcttcccgccaacggtggaagcgga
aaagctgcggagcaggcccaggcgaagcgagaagctgaggaaaagaagatcaaggcaatg
gccgaagagatggagcagcaagaaaggaaaaaagcacaagcacaacaacctgcggctgtc
agctctcaaactccttcgagctcagctagctccaagccacagtcagataaccgcctatgg
actaccaaatatgcgccaacgcagatgagcatgatttgcggcaataaactgcaggttgaa
aggcttcaaacatggttgcgtaattggcgaacaagtgctaaaagacaattcaaaatgcca
ggaaaggacggctctggtctctatcgagctgtcatgattcatggaccgcctggaatagga
aagactactgctgctcacctcatcgccaacttggaggggtatgatgttgtggaaaccaat
gccagtgacaccaggagcaaaaagctcgttgaaggcgggcttttgggtgtcttggacacc
acctctctccaaggctacttctctggcgatggaaagaatgtcgaaagtcagaaacgaaac
ctggtcttgatcatggatgaagtagacggtatgtctgctggagatcggggcggtgttggt
gctttggcagcagcagccaagaagacaaatattcccttgattctgatctgcaatgagaga
agcctgcccaagatgaagcctttcgaccacgtcacttttgagttgcctttccggcggcca
acagcagacatgattagagcccgactttctacaatctgcttccgtgaagggatgaaaatt
ccgcctcacgtcctggatagtttgattgcaggcacaggttcggatatccgacaggtcatt
aatatgctttccacggtgaaactagaccagaaaactcttgattacgaccaaggcaaggaa
ttgtccaaatcctgggagaaaaacgtcatcttgaagccttgggacattgtgtccaagatt
ctcaatgctcagatgttctctccaagctctaaatctacattgaatgaaaagattgagcta
tactttaacgaccacgagtttagttacctgatgcttcaagagaactatctgaggacgaat
ccaatgctcgccggaaattattctgggaaggaacgccaactgaagcttctcgaacttgct
gacaacgcggcatcaagtattagtgacggtgatctagtcgataaaatgatccatggcagc
caacagcaatggagcctgatgccaacccacgccgcctttagtttcgttcggcccgcaagt
tacatgttcggaaatctcggaggacggccaaactttaccagctggttgggtaataacagc
aaacaaggcaagctgaaccgatttgtcaaggatattcaagggcacatgaggctgcgttcg
actggtgaccgggaagagatcagacagcaatacatgccagtattgtggaacaagcttgtt
cgtcccttgatggaggtgggcaaagactcggtcgaggaggtcatagacttgatggacagc
tattttcttactcgcgaagactgggattcgctggttgagctgggcctgggccccatggga
gatgagaacgttaaaatcgaaacacagaccaagtcggcattcactcggatctacaaccaa
cgctcgcatcctttgccatatatgaagaccagcaacgcacttgcactcaagaaggacccc
aaggagaagcctgatattgaagacaccattgagaagtcggacgaggaagataccgccgag
ggcgccaaagaagttgacgaaagcgaagagctggacctgaagaaagacaaatatgtcaag
gtgcctaaagcgaaagccaaagccaaagcaggcgcaagtaaaggcaaaaaggctaatggg
aaagggaagaaaaaggaggatgatttccttgatgacgacgaggaagacgagcagcccaag
aagggtcgcaagggcaaggccaaagctaagtga
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