Talaromyces rugulosus: TRUGW13939_07282
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Entry
TRUGW13939_07282 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
trg
Talaromyces rugulosus
Pathway
trg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRUGW13939_07282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_07282
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
TRUGW13939_07282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
55994775
NCBI-ProteinID:
XP_035346316
LinkDB
All DBs
Position
IV:join(1445507..1446853,1446908..1447201,1447270..1447480,1447558..1447814)
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AA seq
702 aa
AA seq
DB search
MSTPTDPNPVRTATGASAPPVMKIRRPKAADPLVRPKRRPPPGKNIRPSGVANGTRPPPG
AAQPKLNTIPEPPLSRLQRSKVREDLTTNGFSGAPLSNTVTDYPLVTTKRALREGLKYHV
AKLLSKKSMDPRDESQFTRPVRLQRRDPRFRPPEPDASKSEDTKMLDVANSPGEAEREEF
EAKKAAREKEREENLAQIAPSANNPQKRSNPTKPKTQQVMKADMTAEEIARARVKYEEAL
PWHLEDFDNKNTWVGNYEAALSETYAMFVLEPSGNMRMVPIDKWYRFNAKNSFKSLTIEE
AEKFMSKKVKDPRWFMEKQQEAVEKRELETFAKQRKVYRGKAVSGTGLDGDDMDFEEDRF
ADDEEVDAGLFEEDEDAKASEKRIKQDQLKANIFNLKEEKDYDEEETRERKEKEARKVIG
KKVRKALQKREKNFDYSSGSDVNPYSDEESSEEDSEAERQKEADKKLEEEKTAKDKEKES
GASTKGTSTPSGRPKHTDALKKAAIGRKRGGSPNLSDASGTDTSRKKPKHASTQPGRASP
SPSSVLAATKKRSRIGGAVSGSDIEGGALSGGDMSDNSKAKKLKLNLSLGGSRSGTPLSS
RPGSPAPLRAGTPDGVKGPTRGSTPRPVAGAGAAGQPSFPTPAEIHAAIPASGILSRDLL
KIFHPRIGESKENHRRFIAIVKDVGVYGKEDRLLRPGVLKDA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcccaccgacccaaacccagttcgtaccgcgacgggcgcgtcggcgcctcca
gtgatgaagataagacggcctaaagcagcagatcctttggtgcgacccaagaggaggcct
cccccggggaagaatatcagaccctctggtgttgcaaacggcacgaggccacccccaggg
gcagcccaaccgaaactgaacacgatcccagagccgccgctcagccgacttcagcgatcc
aaggtccgagaggatttgaccacaaacgggtttagtggcgcgcctctctcgaatacagtg
accgactacccgttagtgactaccaagcgtgcgctgcgagaaggcctcaagtatcatgtc
gccaagcttctgtccaagaaatctatggaccctagagatgaatcgcaatttacacgtcca
gttcgcctccagcgacgtgaccctcggtttaggccccccgagccagatgcctccaaatcc
gaggatacaaaaatgctagatgtcgccaatagcccgggggaggccgagcgtgaagagttt
gaagcaaagaaagctgcccgagaaaaggaacgcgaagagaaccttgcccagattgcgccg
tcagccaacaaccctcaaaagcggtccaatcccacgaagccgaaaacacagcaagtcatg
aaagctgacatgactgcggaagaaatcgcaagagctcgagtcaaatatgaggaggctctt
ccatggcatctggaggactttgacaataagaacacatgggtaggaaattatgaggctgct
ctatccgagacatacgccatgtttgttcttgaaccgagcgggaatatgagaatggtgccc
atcgacaaatggtatcgattcaatgcgaagaattcgttcaaatccctgacgatcgaggaa
gccgagaaattcatgtcaaagaaagtcaaagacccccgatggttcatggagaagcagcaa
gaagccgtcgaaaagcgagaactggaaacatttgccaaacagcgaaaagtttaccgaggc
aaggcagtttctggaacaggattggatggtgacgatatggactttgaagaagaccgattt
gcagatgatgaagaagtagatgctggtcttttcgaagaagacgaagatgctaaagcttcc
gaaaagcggattaaacaggaccagttgaaagcaaacattttcaacttgaaagaagaaaaa
gattatgacgaggaagagactagagagcgaaaggaaaaggaagcccggaaagtcatcggg
aaaaaagtgcgcaaggcactgcagaaacgcgagaagaactttgactatagtagtggttcg
gacgtgaacccttactctgacgaagagagctccgaggaggacagcgaagcagagcgccag
aaagaagcagataagaaattagaggaggaaaaaaccgccaaggacaaggaaaaggaatcc
ggtgcttcgaccaagggcacaagcacaccatctggtcgtccaaaacataccgatgccctt
aagaaagccgccattggacgcaagcgcggcggatcgcccaatctctcagatgccagtggg
acagatacttcgcgaaagaagccaaagcacgcatcaacccagcctggtcgcgcttcgcct
tctccttcatctgtactcgcggcaaccaaaaagagaagtcggattggaggcgcagtttct
ggaagtgacatcgaaggaggcgccctgtccggaggcgatatgagcgacaatagcaaagcg
aagaagctcaagctgaatctatcactgggcggttctagaagcggtactcctctcagctca
agaccgggtagcccagcacctctccgagcaggaacgcctgacggcgtcaaaggtccaacg
cgaggatcaactccacgtccagttgccggagccggagctgctggccagccaagctttccc
acgccagcagaaatccacgctgctatcccagcctctggcattctcagtcgagatcttctc
aagatcttccacccgcgtatcggcgagtccaaggagaatcaccgtcgattcatcgcaatt
gtcaaggatgtcggtgtctatggtaaagaagaccgtctgctacgtccgggcgtgttgaaa
gatgcttga
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