Talaromyces rugulosus: TRUGW13939_07800
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Entry
TRUGW13939_07800 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
trg
Talaromyces rugulosus
Pathway
trg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TRUGW13939_07800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trg03041
]
TRUGW13939_07800
03009 Ribosome biogenesis [BR:
trg03009
]
TRUGW13939_07800
Enzymes [BR:
trg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRUGW13939_07800
Spliceosome [BR:
trg03041
]
Complex A
U1 snRNP components
U1 related factors
TRUGW13939_07800
Complex B
TRUGW13939_07800
Ribosome biogenesis [BR:
trg03009
]
Eukaryotic type
Pre-60S particles
Helicases
TRUGW13939_07800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
GRP
P-loop_SecA
DUF2443
Utp25_C
Motif
Other DBs
NCBI-GeneID:
55995290
NCBI-ProteinID:
XP_035346830
UniProt:
A0A7H8R2P8
LinkDB
All DBs
Position
IV:complement(join(2897826..2898040,2898096..2898224,2898710..2898817,2898874..2899842,2899904..2900067,2900238..2900311))
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AA seq
552 aa
AA seq
DB search
MAYHGGGGGGYGSRDSHGGGGGGYRGRGGGGGGGYSNGHSNGNGYGGGGGGYGGGGGGYG
GGGGDRMAALGANLKNQDFDLSSLPKFEKSFYKENEEVTNRSQKDIDAFRKANQMAVTGT
NVPRPVETFDEAGFPNYVLSEVKAQGFDKPTSIQSQGWPMALSGRDVVGIAETGSGKTLT
YCLPAIVHINAQPLLSPGDGPIVLILAPTRELAVQIQTEISKFGRSSRIRNTCVYGGVPK
GPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIG
QIRPDRQTCMWSATWPKEVRQLASDFLNDFIQVNIGSMDLSANHRITQIVEVVSDFEKRD
KMIKHLEKIMDDGKNKILIFTGTKRIADEITRFLRQDGWPALSIHGDKQQNERDWVLQEF
KNGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTT
DNSKQARDLVTILTEAKQQIDPRLHEMCRYSGGGGGRGWGGGRGRGGYHRGGGGGGGYTA
SNSAPIGGHRRW
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcacggcggcggcggcggcggctacggctctcgcgattctcacggaggcggc
ggtggtggttatagaggacgcggcggcggtggcggtggcggttattccaacggtcacagc
aacggcaacggctacggtggtggtggtggtggctatggtggtggtggtggtggttacggt
ggcggcggtggtgaccggatggctgctcttggagccaacctcaagaaccaggactttgac
ctctcttccctgcccaaattcgaaaagtccttctacaaggagaatgaagaagtgaccaac
cgttcccagaaggacatcgacgctttccgtaaagccaaccagatggctgtcaccggaacc
aatgtacctcgcccagtcgagacttttgacgaggctggcttccccaactacgtgctttct
gaggttaaagcccaagggtttgacaagcccacttccattcagtcacaaggctggcccatg
gctctttctggtcgtgatgtggttggtatcgccgagactggttctggaaagaccttgaca
tactgtcttcccgccatcgttcatatcaatgcccagccccttctctccccgggtgacgga
cctattgtgctcatccttgccccaactcgtgagttggctgttcagattcaaactgaaatc
agcaagtttggccggtcttctcgtattcgcaacacctgtgtttatggtggtgttcccaag
ggcccccagattcgtgacctcagccgcggtgtcgaggtgtgcattgctacgcctggtcgt
ttgattgacatgcttgaggctggcaagaccaacctccgccgtgtcacctaccttgttctg
gatgaggctgatcgcatgcttgatatgggtttcgagcctcagattcgcaagatcattggc
cagattcgccctgaccgtcaaacttgcatgtggtctgctacctggcccaaggaggtccgt
caactcgccagtgacttcctgaacgactttattcaagtcaacattggatccatggatctc
tctgccaaccacagaatcacacaaatcgtcgaggttgtgtccgactttgaaaagcgtgac
aagatgatcaagcatctcgagaagatcatggatgacggcaagaacaagatcctcatcttc
accggcaccaagcgtattgcggatgaaattactcgtttcctgcgccaggacggctggcca
gcactgtcgattcacggtgacaaacaacaaaacgaacgtgactgggtcttgcaagaattc
aagaacggcaagagcccaattatggttgctaccgatgtggcttcccgtggtattgacgtt
cgcgatatcactcacgtattgaactatgactatcccaacaactcggaggattatgtccac
cgtatcggtcgtactggccgtgccggtgccaagggaacggccattacgttcttcaccact
gacaattccaagcaggctcgcgatcttgtgactattctgaccgaggctaaacaacaaatc
gatccccgtctacatgagatgtgccggtacagcggtggcggtggtggtcgcggttggggt
ggtggtcgtggccgtggtggttatcaccgcggtggtggtggtggtggtggctacaccgcg
tccaactcggcgcctattggtggtcaccgcagatggtaa
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