Talaromyces rugulosus: TRUGW13939_07870
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Entry
TRUGW13939_07870 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
trg
Talaromyces rugulosus
Pathway
trg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TRUGW13939_07870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_07870
Enzymes [BR:
trg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TRUGW13939_07870
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
TRUGW13939_07870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
zn-ribbon_14
NRDD
Motif
Other DBs
NCBI-GeneID:
55995360
NCBI-ProteinID:
XP_035346900
UniProt:
A0A7H8R2W5
LinkDB
All DBs
Position
IV:complement(join(3082442..3085664,3085724..3086076,3086142..3086204))
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AA seq
1212 aa
AA seq
DB search
MPPRKRPQPAVADTAKPSSAGPKRLPKASAANRPKPASTTTRKPEEHGHDHDHSSHPQKP
RKVDPFDALLEPFYYNKSLTDPINTARDKWNLLPAFLKVKGLVKQHIDSYNYFIEVQLKK
IIQSSSTIYCETDPSFFLKFTDIYVGTPRRSDDPKEEIDFESTVTPNECRLRDATYAAPI
YVDLLYTRGGDNRVRRTGVPIGRMPVMLRSSKCVLSKKPAAEMHYLNECPLDPGGYFIVN
GTEKVILVQEQLSKNRIIVETDPKKEIVQASVTSSSNERKSKSYIILKKERLYLRHNVLS
EDVPLVIVLKAMGVHSDKEMLLLVAGMDNLYQDDFAINFEEAIKQNVYTQQQALDWIGAK
IKINRSGKSTDYKKTHSEEAIEALSSVVISHVEINDMDFRPKALYIANMARRVLMAKHDA
GMVDDRDYVGNKRLELAGQLLALLFEDLFKKFCFDIKMNISKVMGKRQREIFDAMSVVTL
HANHITHGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVS
GPRALQTSQFGMLCPSDTPEGEACGLVKNLALMTHITTNDEEGPVAKLVFMLGAEDIITL
GGKEIYGPGAYIISMNGTPMALTRRPKHFLDSFRRLRRMGRVSEFVSIYINHHQHAVHIA
TDDGRICRPLVVVANGKPLVGVSHLEKLRDGSMQFDDFLAQGLVEYLDVNEENDSNIAIY
ERDVVDITTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAANQFLRID
SLLYLMVYPQKPMVKTRTIELIKYDQLPAGQNATVAVMSYSGYDIEDALVLNKGSVDRGF
GRCQVFRKYVTHLKSYPNGLSDILRGPDRDQDHIPIEKHALIDEDGLAAVGEKISHGEVF
INKAVPESAFSSGITGSEVGREQEYSAAPMTYKLPDPAYIDKVMISVTEGEGNIYKVLTR
QTRRPEPGDKFSSRHGQKGVCGIIAEQADMPFTDQGIVPDIIMNPHGFPSRMTVGKLLEL
VAGKAGVLSGHHGYGTAFGGSPVEEMSAILVDKGFSYGGKDYLTSGITGEPLPFYVFTGP
IYYQKLKHMVQDKMHSRATGPRATLTRQPTEGRSRDGGLRLGEMERDCLIAYGTSQLLLE
RLMLSSDKHEIDVCEKCGFMGYHNWCQSCRSSRGVVKMTIPYAAKLLIQELLSMNVTARL
KLEDEFPESRGM
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgcctccacgcaaacggccgcagcctgcggttgctgatactgcaaaacccagttcagcc
ggaccaaaacgacttcccaaggccagcgccgccaacagaccaaaaccggcctcgactacg
actcgcaagcccgaagaacatggccacgaccacgatcactcttctcatccacagaagccc
cgaaaggtggatcctttcgatgccctcttggagcccttctactacaacaaatccttgact
gaccctatcaataccgctcgcgacaagtggaatctactaccggcctttctcaaggtcaag
ggcctggtgaagcaacacatcgattcttacaactacttcattgaagttcaactcaagaaa
atcatacaatctagttcgacaatctactgcgaaaccgaccccagttttttcctcaaattc
accgatatttatgtcggcacccctcgtcgcagcgatgatccaaaagaagaaatcgatttt
gaatctaccgtcacgccgaacgaatgccgacttcgtgatgccacttatgctgccccgatt
tatgtcgatttgttatacactcgcggcggtgataatcgagtcagaaggactggtgtgccc
atcggccgtatgccagtaatgttgagaagctcaaaatgtgtgctatcgaaaaagcccgct
gctgaaatgcactacttaaacgagtgtccactcgatcccggtggttatttcatcgtcaac
ggcacggaaaaggtcattctcgtccaggagcaactgagcaagaaccgtatcattgtcgaa
accgatcccaaaaaagaaatcgtgcaggcttccgtcactagttcatccaacgaacgaaaa
tcaaagagttacatcatcctcaaaaaagaacggttgtatctaaggcacaacgtcctttct
gaagatgttcctctcgtcatcgtcctcaaagccatgggcgtccattccgataaagagatg
cttcttctcgttgccggtatggataatctttaccaggacgactttgccatcaattttgag
gaggctatcaagcaaaatgtttatacccagcagcaagccctcgactggataggcgccaag
atcaagatcaaccggtctggcaagtctacagactacaagaaaacgcacagcgaggaggct
attgaggctctctcttccgtcgtcatttcccatgtcgagatcaatgatatggactttaga
cccaaggcattgtatattgccaacatggcccggcgtgtcttgatggccaagcacgacgca
ggaatggttgatgaccgagactatgtaggaaataagcggttggaactggctggccaactt
ttggctctccttttcgaggatcttttcaagaaattttgctttgacatcaagatgaacatc
agcaaagttatggggaaacgacagcgagagattttcgacgctatgagcgtcgttacttta
cacgcaaaccatatcactcatggaatgaaccgagctatatcgaccggaaactggagtctc
aagcgattccgaatggaacgtgccggcgtcacccacgtcttgagtaggctgagttacatt
gcagcactgggcatgatgactcgtatttcgagtcaatttgaaaagactagaaaagtcagt
ggaccccgagctctacaaacctcacaatttggcatgctctgtccgtccgataccccggaa
ggtgaagcctgtggtttagtgaagaatttggcactcatgacgcacataacaaccaacgat
gaagaaggcccggtggcgaagctggtctttatgcttggggcagaagatattatcaccctg
ggcggcaaagagatctacggacccggagcatacatcatttctatgaacggtacacccatg
gctcttactagacggccgaaacactttctagactcgtttcgcaggttgcggcggatgggc
cgagtttccgagtttgtgagcatctacattaaccaccatcagcatgcagtccatattgca
accgatgacggacgtatttgtcggcctctcgtggtcgtggccaatggaaaaccacttgtt
ggcgtgagccatttagagaagcttcgggatggatcgatgcaatttgacgactttcttgcc
cagggcttagtcgaatacttggacgtcaacgaggagaacgattcgaacattgccatctat
gagcgcgacgtggttgacattactacccatcttgagattgagccttttacaattctgggc
gctgtcgctggtcttattccatatcctcaccataaccagtcacctcgaaatacataccag
tgtgctatgggtaaacaagccattggtgcgattgccgcgaaccagttcttgcggatcgac
tcgttgctttatttgatggtgtatccccagaaacccatggtaaagacacggaccattgaa
ctcatcaaatacgaccagcttccagctggtcagaatgccactgttgcagtcatgagctac
tcaggttacgatatcgaagatgccctggtgctaaacaagggatccgtcgaccgaggcttt
ggacgttgccaggtgttccgcaaatatgtcactcatttgaaaagttatccgaacggattg
agtgatatacttagaggacccgatcgagaccaggaccatatccctatcgagaaacacgcc
ttgattgatgaggatggtttagctgctgttggcgaaaagattagccacggcgaggtcttt
attaacaaagccgttccagaatcggcattttcgagtggcatcacagggtccgaggtggga
cgtgagcaggagtattctgcggcacccatgacatacaaactccctgacccggcttacatt
gacaaagtcatgatttctgtcaccgaaggtgagggtaacatatacaaggttctgactcga
caaacgcgcagacctgagcctggcgataaattctcttcgcgtcacggacaaaagggtgtt
tgtggcattatcgcagagcaggcagatatgccattcacagaccagggaattgtgccggac
attatcatgaacccgcatggtttcccatctcgaatgactgttggcaagttgctcgaactt
gtggctggcaaagctggcgtcctgtcaggacatcatggctacggaacagcatttggtggc
agccccgttgaggagatgtcggccattctcgttgataaaggatttagttacggcggcaaa
gactacttgacctctggcatcactggcgagcctctgccattctatgttttcaccggtcca
atctattaccaaaagctgaagcatatggttcaggacaagatgcactcgcgtgcaaccggt
ccacgggcaactctaacccgccaaccgactgaaggtcgttcccgagacggtggtctgcgt
ctcggagaaatggaacgcgactgtctcattgcttacggcaccagccagctcttgctcgaa
cgcctgatgctttcttctgacaaacacgagattgacgtttgtgaaaagtgtgggtttatg
ggttatcacaactggtgccagagctgcaggtcatcgcgcggggtggtcaaaatgacaatt
ccgtacgcagccaagctattgatccaggaacttcttagtatgaacgttactgctcgactg
aagcttgaggatgagttccccgagagccgtggaatgtaa
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