Talaromyces rugulosus: TRUGW13939_08162
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Entry
TRUGW13939_08162 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K24752
WD repeat-containing protein 70
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trg04121
]
TRUGW13939_08162
03036 Chromosome and associated proteins [BR:
trg03036
]
TRUGW13939_08162
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_08162
Ubiquitin system [BR:
trg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
TRUGW13939_08162
Chromosome and associated proteins [BR:
trg03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
TRUGW13939_08162
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
TRUGW13939_08162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
DSE1_N
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
MIOS_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
55995651
NCBI-ProteinID:
XP_035347191
UniProt:
A0A7H8R4C2
LinkDB
All DBs
Position
IV:complement(4204626..4206392)
Genome browser
AA seq
588 aa
AA seq
DB search
MDGFDEEAFKQFFPSGFGKQEKQTDVVAQIDRSKRTDVKPKSEDAQNAQSDLRIQDSKAA
EAEDSVKDSDSDSNDDDDDDDDDEDEFPVSHELVLKTHERAVTTASLDVAGGRLVSGSTD
CTIKLHDFSSMTPSTIRAFKSVDPSAKKQSAAQETHPVNYVAFNPISPSQMLVIPATPQP
KIYDRDGNVLIEFVKGDMYLRDMHNTKGHVSEVTSGAWSPTDHKLCATAGTDSTIRIWDV
NVGRNQKEVIVHKSRAAGSAGRTKVTAVAWASPKQGGPNVLVAAGFDGSIAMWSGDGPYT
RPAAEVRDAHTRDTWTGGVDISADGRLVVTRGGDNTIKLWDTRKFKQPITTVIHQSTSDH
YPTTNIKFSPTGTNIITGSDTGHLHILNPATLKPELVTPVTPGSPLVTVLWHDKLNQILT
GSVNGEMHMLYNPTMSTKGAALVMSKAPKRRHVDDDPNFTTDISQGFSGDSMGVGANGMP
QSAAASWSARHPTVGLTVSGRSRDPRRPHLPAQTPFAKSQPDAKHIRESIPLSSMRDEDP
REALLKYADKAKKDPIFTKAWEKTQPKTIYAEISDEEDERPDKKKARR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggacggcttcgacgaggaagcttttaaacagttctttccgagcggttttgggaaacaa
gagaagcagaccgatgtcgtcgcccaaatcgaccgatcaaagcgaactgatgtgaagccg
aaatccgaagacgcgcaaaatgcgcaaagcgacttgagaatacaagactccaaggctgca
gaggcagaagattcggtaaaagattcagacagtgatagcaatgatgatgacgacgacgac
gacgacgatgaagacgaattccccgtatcgcatgagctcgtgctcaagacacacgaacgc
gccgtgacgacagcgtcccttgatgtagctggaggtcgacttgtttctggctctacggac
tgcacaataaaacttcacgacttttcctcaatgacgccctctacgatccgagctttcaag
tccgtcgatccgagtgcaaagaagcagtcggcagcacaagagacacacccagtgaattat
gtcgccttcaaccccatatcgcctagccaaatgttggttattcccgccacgccccagccg
aagatttacgaccgggatggcaatgtgctcatcgaatttgtcaagggtgacatgtatttg
cgggacatgcacaataccaaaggccatgtctcggaggttacgtcaggtgcttggagccct
acggaccataaattatgcgccactgccggtacagacagtactattaggatttgggacgta
aatgtcggccgaaatcaaaaagaggttattgttcacaagtccagggctgctggttcagcg
ggaaggacaaaggtaaccgctgttgcatgggcttctccaaaacagggcgggcccaatgta
ctcgttgccgcgggatttgatggcagtatagctatgtggagtggcgatggcccttatact
agaccagctgcagaggtcagagacgcgcataccagggatacttggaccggcggtgttgat
attagtgctgatgggcggttggtagtgacgaggggaggcgacaatactatcaagctgtgg
gatactcggaaattcaagcagcccatcacgaccgtcatccaccagtcaacttcagatcat
tatccaacgactaacatcaaattctcgccaactggtaccaacatcatcaccggctccgac
acgggccatctccatatcttgaacccagcgacactaaaaccggagcttgtgacgcctgtc
acaccagggtctcctttggtcaccgtgctttggcacgataaattaaatcaaatcctaacg
ggttctgtcaatggcgaaatgcacatgctctataacccgacaatgtccaccaagggcgcg
gctcttgttatgtccaaagctcccaagcgacggcatgttgatgatgaccccaacttcaca
acggatatatcgcaaggtttctctggtgactcaatgggtgtcggggcaaacggcatgcct
cagtcagcggcggcaagctggtctgctcgccatcccacagttggcctcacagtatccggg
cgctcaagagatcctcgtcggccgcatctccctgctcaaactccgtttgcaaagtcgcag
cctgatgcaaagcacattcgcgaaagcattccactcagctccatgcgcgacgaagatcct
cgagaagcattgctgaagtatgcggacaaagccaagaaggatcctattttcaccaaggct
tgggaaaagactcagcctaagactatatatgccgaaatcagtgatgaagaggacgagcgc
cctgacaagaaaaaagcaaggcgatag
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