Talaromyces rugulosus: TRUGW13939_08393
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Entry
TRUGW13939_08393 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
trg
Talaromyces rugulosus
Pathway
trg03022
Basal transcription factors
trg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TRUGW13939_08393
09124 Replication and repair
03420 Nucleotide excision repair
TRUGW13939_08393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_08393
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_08393
Enzymes [BR:
trg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TRUGW13939_08393
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TRUGW13939_08393
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TRUGW13939_08393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
AAA_34
MtrG
Motif
Other DBs
NCBI-GeneID:
55995882
NCBI-ProteinID:
XP_035347420
UniProt:
A0A7H8R6N4
LinkDB
All DBs
Position
IV:complement(4835214..4837697)
Genome browser
AA seq
827 aa
AA seq
DB search
MAHKRKATEHGSTRASKRATPVPNTPQDVGSSDEYSEYDEKVEKTQELVEKFSLESFSRT
QKGAGEGFDPHYGYKDFSSLPLKPDHANRPLWIEPLKGTITLESFSPLASQAADFLTTIA
EPLSRPVHLHEYRLTGNSLYAAVSVGLEPKDIIHFLDRLSKTPLPDAIQSFIVNFTKSYG
KIKLVLNNNKYFVESTDPGMLQMLLQDDVIGTQRVQGSEGITQQAAPKMAGLVIPGTKDA
AGVKQANQNSGDQGAANGTTAEAPKEDDFLATIRDEDDDDDQAQVHSFQIPNDAVESVKA
RCQAMGCPALEEYDFRNDKDNPTLDIDLKPNAQIRSYQEKSLSKMFGNGRAKSGIIVLPC
GAGKTLVGITAACTIKKGIIVLCTSSMSVVQWRNEFIRWSNIDPSDIAIFTSDNKEKFKR
STGIIVSTYSMVSQTRARSYDAQKMMDWLTQREWGLMILDEVHVVPASMFRKVTSTIACQ
TKLGLTATLLREDDKIKDLNFLIGPKLYEANWMELAEQGHIAKVQCAEVWCPMTTEFYSE
YMREKSRKAALLYIMNPRKFQACQFLIDYHEKRGDKIIVFSDNVYALERYALKLGKAYIY
GGTPQNERMRILENFQHNEQVNTIFLSKIGDTSLDLPEATCLIQISSHYGSRRQEAQRLG
RILRAKRRNDEGFNAFFYSLVSKDTDEMFYSSKRQAFLVDQGYAFKVITHLQGIENLDGL
AYATPAERRELLQEVMLQNETSAEVELVTDDLFSERSGGQRVARGKKAAVKRSAATLSGL
AGGEDMAYVEYNKSRNKQLKDKAQHHPLFKKIARDQQRRKDAMKDMT
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggcacacaaacgcaaggcgaccgaacacggctcgactcgggcctcgaaacgagcgaca
cctgttcccaatacaccgcaagacgttggcagcagcgacgagtattccgagtacgatgag
aaggtagagaagacacaagagctggtcgagaagttttccctggaatcgttcagcaggaca
caaaagggcgccggcgaagggtttgatcctcactatggctacaaggacttctcgtcgttg
cctctgaaaccggaccacgccaaccggcctctgtggatcgagcctctcaaaggcaccatc
accctggagagtttctctccacttgcgtctcaggctgccgactttttgacgactattgcc
gagccgctatccaggcccgtccacttgcacgaatacaggttgactggaaacagtctgtac
gctgccgtttctgttggcctggagcccaaggatatcattcatttcctcgaccgtctttcc
aagactcctcttcctgatgctattcaatctttcatcgtcaacttcaccaagtcgtacggc
aaaatcaaactagttctcaacaataacaaatattttgtcgaaagcacagacccaggaatg
ctgcagatgcttctccaggatgacgttattggcacccagcgtgtccaaggctccgagggt
attactcaacaggcggcgccgaagatggctggacttgtcattccgggtaccaaagatgct
gctggtgtgaaacaggcgaatcagaattcgggggaccagggtgctgcgaatggcacgaca
gcagaggctcccaaagaggacgatttcttggcgactattcgagatgaggatgatgatgac
gaccaagcacaggttcatagctttcagattcctaatgacgctgttgaatctgtcaaggcc
aggtgtcaagcaatgggttgtccagccctcgaagagtatgactttcgaaacgacaaagac
aaccctacgcttgatatcgatttaaagccgaacgctcaaatccgaagttatcaagagaag
agtctaagtaagatgtttggtaatggtcgtgctaaaagtggaattatcgttttgccctgt
ggtgcggggaaaacactcgtcggtataacggccgcttgcacaatcaagaagggaattata
gtcctgtgtactagctccatgtcggtcgtccagtggcgaaacgagtttattcgatggtca
aatatcgaccccagcgatattgccattttcacatctgacaataaagaaaagttcaagcga
tcgaccggtatcattgtgtcgacctattccatggtttctcaaacgagggcccgatcatac
gatgcccaaaagatgatggattggttgacacaacgagaatggggactgatgatattggac
gaagtgcacgtcgtgccagcatcgatgttccgaaaggtcacgtccaccattgcttgtcaa
accaaactaggtttaactgcaacacttcttcgagaagacgacaagatcaaggatttgaac
tttttgatcggccccaagctgtacgaagccaactggatggaactggccgagcagggccat
attgccaaggtccaatgtgccgaggtgtggtgcccaatgacgaccgaattttactcggaa
tacatgcgggaaaagtcacgaaaagcagcattgctatacattatgaacccgcgaaaattc
caggcttgccagttcctaattgactaccacgagaaaagaggcgataaaatcatcgttttc
tccgataatgtctacgctctagagcggtacgctttgaaactgggtaaggcttacatttac
ggtggcaccccccagaacgaacgcatgcgtattttggaaaactttcagcataacgagcaa
gtcaacaccattttcctgtccaaaattggagacacgtctctcgatcttcccgaagccacc
tgcctcatccagatttcttcgcactacggttctcgtcgacaggaagcacaacgcttaggt
cgtatcttgcgagccaagcgtcgtaacgatgaaggcttcaatgcgtttttctactctctc
gtttcaaaggacactgacgagatgttttactcctccaaacggcaagccttcctcgttgac
caaggttacgctttcaaggtcatcacacatttacaaggaattgaaaatctcgatggcctc
gcgtatgctaccccggctgaacggcgtgaactccttcaggaagtgatgctccagaacgaa
acgtcggccgaggtcgagctggtcacggacgacctcttcagtgagcgatctggtggccaa
cgagtcgcaagggggaaaaaggcagccgtcaagcgcagcgctgcgacgctcagtggtctt
gctggcggcgaagatatggcttatgtggagtataacaagtcccgcaataagcaactcaag
gacaaggcgcagcatcatccgttgttcaagaagattgctcgggatcagcagagacgaaag
gacgctatgaaggacatgacgtga
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