Talaromyces rugulosus: TRUGW13939_09078
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Entry
TRUGW13939_09078 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
trg
Talaromyces rugulosus
Pathway
trg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TRUGW13939_09078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_09078
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
TRUGW13939_09078
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Ortholog
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GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
55996562
NCBI-ProteinID:
XP_035348096
UniProt:
A0A7H8R6D1
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Position
V:complement(join(1538280..1540959,1541014..1541318))
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AA seq
994 aa
AA seq
DB search
MHFKPFRPPLIRKNLASDVSSDSPNSDINTPRPFKRPRLESKHDDEADSDVISKPSDGNI
TKKPASQRPLNPVRNSSSDGDNSTDKQNAPADDVEAYYNVLWRKFTTKKHKTWDGDGILS
IRGGYGYLRDVSGRDMGRIVINTPLEPGASLSISGKDVEIESSISKEDYLSGRDFLGGAK
KLATSPPVRSKAATSVTPSNLQRAKVEASSVNKAAKKDISNETDSTQPGKQMFSVKHLNT
ASSRSAGLGSIFKNPLKDKTISTPQITGQPTPRHDPNAPGALVMKRPTSVPKGKAVVDVV
VDPLLSKHLRDHQREGVKFLYECVMGLRDFNGEGAILADEMGLGKTLQTITLLWTLLKQN
PIYESSPVIKKALIVCPVTLINNWRKEFRKWLGNERIGVFVFDDKRKRLTDFTMGKAYSI
MIVGYEKLRTVQEGLTKGHGVDIVIADEGHRLKTVQNKSGQAIQALNATKRVILSGTPIQ
NDLSEFFAAVDLINPGILGTYKNFMREFEGPIVRSRQPEATKKDIEKGESRSEELRDLTS
MFMLRRTAEVLSQYLPPKTEYVLLCEPTSTQANIYRHVLASPIFQTALGSTDGAFSLLTI
LKKLCNSPSLINPKTNDESSKNNTITALLSTLPPNLIRHFSPSSSGKIRVLDQLLYNLRT
TSSEKIVLVSNYTSTLDLLATLLTSLSLPFLRLDGSVPTAKRQSLVDDFNRTPADACFAF
LLSAKAGGTGLNLIGASRLVLFDIDWNPATDMQAMARIHRDGQKRHCYIYRIMLKGSLEE
KIWQRQVTKIGLADSVMESKGGVAQFSREELKDLFRLHEGEGCQTHELLGCSCGGKGTPI
LAEGDDESDSLEEPRSQSPFFKEDSTSSEAEEEIEFPDLPTLMKASQVDMEEQEKRILQG
IHALQQRNNKRTARGKKDSGSKGKSDGTSGTNKIQQFLSQYLHIDPAAFTDQDSELQSQI
GDSVLQSLFKDGDHGVGFIFEKTAFPTTPVGASS
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcaagcctttccggcctcccctcattcgaaagaatttggcatcagacgtatca
tctgactcaccaaactccgatatcaacacccctcgtccgttcaaacgaccgcgtttagaa
agcaaacacgacgacgaagccgatagtgatgtcatttccaagccatcagatggcaatatc
accaagaaacctgcctcgcagagaccactgaacccagttcgcaattcgtctagcgatggg
gacaactcgacagacaagcaaaacgctccagccgatgatgtggaagcgtactataatgtt
ctatggcgaaaattcaccaccaagaaacacaagacctgggatggtgacgggatcctttca
atccgcggaggttatggttacctgcgtgacgtgtctggccgggacatgggcagaatcgtg
attaatacaccactcgaacccggcgcaagtctatcgattagtggaaaggatgtggagata
gagtcgtcaatttcaaaagaggactacttgtcaggacgagactttttaggtggagcaaag
aaactcgcaacttcacctccagttcgatcaaaggcagcaacctcagtgaccccaagcaac
cttcaacgcgccaaggttgaagcatcttctgttaataaagctgcgaaaaaagacatatca
aatgaaacagactctacgcagcccgggaaacagatgttttcagtgaagcatctcaatact
gcgtcctcaagaagcgccgggctcggcagtatcttcaagaacccattgaaagataaaacc
atctcaacccctcagataactggtcaacctactccacgtcatgatcctaatgcacctggg
gctctggttatgaagagacccacctctgttcccaaaggaaaggcagttgtcgatgttgta
gtcgatcccttactgtccaagcatttgcgtgaccaccaacgggaaggcgtcaaattcctt
tacgaatgcgtgatgggtctgcgggatttcaatggtgaaggagccatcttggctgatgag
atgggtcttggaaagactctgcaaaccataacactcctgtggaccctgctcaaacaaaac
cctatctacgaatcatccccagtaataaagaaagctttgatagtgtgtccggtgactctc
atcaataattggagaaaagaatttcgcaaatggctcggcaatgaacgcattggggtgttt
gtctttgacgataagcggaaacgattaaccgatttcacaatgggcaaggcgtacagtatt
atgattgttggctatgaaaagcttcgcactgttcaagaaggacttaccaaaggccatggc
gttgacatcgttattgccgatgagggccacagactcaagactgtgcagaacaagagcggc
caagctattcaagcactgaatgccacaaagagggtcatcctatcgggcactccgatccaa
aacgatctcagtgaattctttgcggctgttgacttgataaacccagggatccttggcacc
tacaagaactttatgcgagagtttgaaggcccgattgtgcggagccgacaaccagaggcg
actaaaaaggacatagaaaagggcgagtccagaagcgaagaacttcgggatcttacatcg
atgtttatgctccgcaggacagctgaagtcctgtcgcagtatttgccacccaaaacagaa
tatgtgttattatgtgagcccacgtctacccaggctaatatctaccgacacgtgcttgcg
tctcccatttttcaaacggcactggggagcacggatggggcatttagccttttaactatt
ttaaagaagctttgcaacagcccatcccttatcaatccgaaaacaaacgacgagtcgtcg
aaaaacaatacaatcacagcattgctgtcgactctccctccaaaccttattcgacatttc
tccccttcctctagtggtaaaatcagagttcttgatcaactgttatacaatttacgaaca
acatcttcagaaaagattgttctagtttccaactatacatccacactagaccttctcgcc
acactgcttacatctctatcattgccttttcttcgcctggacggctctgttcccaccgca
aaacgtcagtctctagtcgatgacttcaaccgcacccctgcggacgcatgcttcgcgttc
cttctatctgccaaagccggcggaacaggccttaacctgattggagccagtcgtttggtc
cttttcgacatcgactggaacccggctaccgatatgcaagccatggctcgaatccaccga
gatggccagaaacgccattgctacatctaccgcatcatgctaaagggcagtcttgaggaa
aagatctggcagcggcaggtcacgaaaatcggcttggcagacagtgtcatggaatcgaaa
ggtggtgtagcccagttctcgcgcgaggaactgaaggatttatttcgactgcatgaaggc
gagggctgccaaacccatgagctacttggatgcagttgtggcggcaaggggacacctata
cttgcagaaggagatgatgagagcgattctctggaggaaccgagaagccagtctccattt
ttcaaagaagattcgacaagcagcgaagccgaggaagaaatcgagtttccagacctcccc
acgctcatgaaagcatcccaagtcgacatggaagaacaagagaagcggatccttcaaggc
attcatgccttgcaacaacgaaacaataaacgaacggccagaggcaaaaaggactcgggc
agtaaaggaaaatcagatggtacctctgggacaaataaaatccaacagttcctttcgcag
tacctgcacattgacccagctgcttttacagaccaggattctgagctccagagtcaaatc
ggtgattcggtcttgcagtccctattcaaggatggggaccatggagtagggtttatattc
gagaaaacggcgtttccaacaacaccagttggggcgtcctcgtaa
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