Talaromyces rugulosus: TRUGW13939_09650
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Entry
TRUGW13939_09650 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
trg
Talaromyces rugulosus
Pathway
trg03020
RNA polymerase
trg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TRUGW13939_09650
09124 Replication and repair
03420 Nucleotide excision repair
TRUGW13939_09650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_09650
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_09650
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
TRUGW13939_09650
DNA repair and recombination proteins [BR:
trg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
TRUGW13939_09650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
55997133
NCBI-ProteinID:
XP_035348663
UniProt:
A0A7H8R7X6
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All DBs
Position
V:complement(join(3157147..3157341,3157411..3157520,3157595..3157653,3157792..3158096))
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AA seq
222 aa
AA seq
DB search
MRIISSLSAAKEEGPERNKTGGLAPALLRFPSTFSPSSCPFALTLGFHPFSISQDLFVVA
VALHMTISFAMPWTRNGHRAEAPESRYRDASVPPPGANIPRKTETFLLGENEKKIEEKAD
TRTPSTSIFTLNKEDHTIGNLLRSRLLQNRHVTFAAYKVPHPLVNKLELRVQTDGEMTPK
DALLGACHDTVKDLGTLSREFTKEFELRKMVGAAQQQNGAQD
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcatctcatctctgtctgcggcgaaggaagaaggccctgagagaaacaaaacc
ggcgggcttgcgcctgctcttctccgctttccctcgaccttttctccctcgtcatgtccc
tttgctctcacgcttggtttccatcctttctccatctcccaagacctgtttgttgtcgct
gttgcattgcatatgactatctcattcgccatgccttggactcggaacggccatcgtgct
gaggcgccggagtctcgttatcgagatgcttctgttccgccgccgggtgcgaacatacct
cgaaaaacagaaacctttcttctaggggagaacgaaaagaaaatcgaagaaaaggcagac
acgcgaactccttccacctcgatcttcaccctcaataaagaggatcacacgattgggaac
ttgctgcgctctcggctgcttcagaaccgccatgtcacatttgcggcgtacaaggtgcct
catccattggtcaacaagcttgaacttcgtgtacaaacagacggggaaatgacccccaag
gatgcacttctcggcgcttgccacgatacagtgaaagatctcggtacgctgtctcgggaa
ttcaccaaggagtttgagctgcgcaagatggttggagctgctcaacagcagaatggcgcg
caggactga
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