Talaromyces rugulosus: TRUGW13939_09833
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Entry
TRUGW13939_09833 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trg03009
]
TRUGW13939_09833
Ribosome biogenesis [BR:
trg03009
]
Eukaryotic type
90S particles
Other 90S particles
TRUGW13939_09833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_EML
WD40_Gbeta
WDR55
NBCH_WD40
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_LRRK2
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_ACSF4
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
DUF885
WD40_like
Motif
Other DBs
NCBI-GeneID:
55997316
NCBI-ProteinID:
XP_035348846
UniProt:
A0A7H8R8F5
LinkDB
All DBs
Position
V:complement(join(3845013..3846506,3846564..3846941))
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AA seq
623 aa
AA seq
DB search
MSSFFTLPASQRKRKREDRVAAPGSKKRGVAVNGDSRGKQSSQRQERDESISGSESEDDQ
GSDVSGLSDEDGDTSEDSEQGETGADRRLKLAERYLDNIREEVDEVGFDAAEIDRDLIAE
RLKEDVDEAKGRIFRQLATQVDLPAASLSFFRADTQSTTAVAVHPPFAYTVSKDRTLIKW
ELATPRADEPPALSNGDSGRRSHPGRTKPKNLKFVKGLRKVRGSRERQGHTGNILSVAVS
PSGKFVVTGGDDKKLIIWEADTLSPVRTFTQHRDAVSSLAFTRHISSHSSGEQLFSGSFD
RTIKTWSLSPGGHAYVETLFGHQDNVLSVASMMTDQCVSVGARDRTARLWKVVDEAQLVF
RGDSSRKEEYKTNNIECVTAIPPTHFVTGSDSGALSLWSIHKKKPLHTIPLAHGLDPIPP
LDQLSPETDVKTAARNARFMRRMPRWITALTAVPGTDIVLSGSWDGWIRAWRVSEDKRFL
SALGPVGCPSPSSLSLLSSSSLSSSSQLKQTLFSDNQTNSPTNPEIEPAPEPVSEPEPLL
KGVINSIAVFERRPTSTKSTQNEKGGLCIVAALGKEHRLSRLKCFENNHHNGASAQGRNG
AVVLEVPFLDTVEQQHDDDSGSV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccttttttacgctgccagcctcgcagcgcaagcggaaaagggaagatcgtgtc
gccgcacctgggtcaaagaagcgcggggtggcagtcaatggggattctcgcggcaaacag
tcatcgcagagacaggaacgggatgagtcgatatccgggagcgagtcggaagacgaccaa
ggctctgacgtgtctggcctctctgacgaggatggcgacacctctgaagactcggagcaa
ggcgagacgggtgcggaccggagattgaagctcgccgagaggtatctggacaatatccgt
gaggaggtagacgaggtcgggttcgatgctgcagagattgaccgtgatcttattgcggag
agactgaaggaggatgtggacgaagccaaaggccgcatattccgccaattagccactcaa
gtagatctcccagcggcttcactttcgttctttcgtgcagatacgcagtctacgacggct
gtcgccgtgcatcctccctttgcctacacggtttcgaaagatcgcactctgatcaagtgg
gaattggccacaccacgagcggatgaacccccggcattatcaaacggtgacagcgggcgt
cgatcccacccggggcgcacgaaaccaaaaaatctaaaatttgtcaaaggactgcgaaaa
gtccgcggaagtcgagagcgtcagggtcatactgggaacatactatccgtggcagtatcg
ccgtccggaaagttcgttgttactggaggagacgacaagaagctgatcatctgggaggcc
gacacactcagccctgtgagaacgtttactcaacaccgcgacgctgtcagcagtctggca
ttcactcgacacatctcgagtcacagctctggcgagcaactattctcaggctcctttgac
cgaaccatcaagacatggtcactcagcccgggggggcatgcctacgtggaaacactattc
ggccaccaagacaacgtcctttcagtggcctcgatgatgacagaccagtgcgtgagcgtc
ggcgcccgcgaccgaaccgcacgactctggaaagtcgtcgatgaagcgcagctcgtcttc
cgcggcgactcgtccagaaaggaagaatacaaaaccaacaacatcgaatgcgtaaccgcc
atcccgccaacccatttcgtcacgggctccgactcgggcgcgctgtcgctgtggtcaatt
cataagaaaaaaccgctgcacacgatccctctcgctcacggcctcgacccgattccgccg
ctagaccagctgtcacccgagactgacgtgaagacggccgcgcgcaacgctcggtttatg
cggcgcatgccacgctggatcacggcgctgacagctgtgcccggtacagatattgtgctg
agcggcagctgggatggctggattcgcgcgtggcgtgtttcggaggacaagaggtttctc
tctgcgctggggccggtgggatgtccgtcgccatcgtcgttgtcgttattatcatcatca
tcattatcttcatcatcacaactcaaacagaccctcttcagcgataaccagaccaactct
ccaacaaacccagaaatagaacccgcaccagaaccagtttcagaaccagaacccctcctc
aaaggagtcatcaacagcatcgccgtcttcgaacgccgccctacctcaacaaaatctacc
caaaatgaaaaaggaggactctgcatagtcgccgccctgggcaaagagcatcgcctcagc
cggctgaaatgctttgagaacaaccaccacaacggagccagcgcgcagggccgtaatggc
gcggttgttttggaagtgccgttcttggatactgttgagcagcagcatgatgatgattct
ggaagtgtatga
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