Talaromyces rugulosus: TRUGW13939_09948
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Entry
TRUGW13939_09948 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
trg
Talaromyces rugulosus
Pathway
trg03420
Nucleotide excision repair
trg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TRUGW13939_09948
03430 Mismatch repair
TRUGW13939_09948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trg03400
]
TRUGW13939_09948
Enzymes [BR:
trg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TRUGW13939_09948
DNA repair and recombination proteins [BR:
trg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TRUGW13939_09948
MMR (mismatch excision repair)
Other MMR factors
TRUGW13939_09948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-GeneID:
55997429
NCBI-ProteinID:
XP_035348957
UniProt:
A0A7H8RE11
LinkDB
All DBs
Position
V:join(4159719..4160087,4160166..4162715)
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AA seq
972 aa
AA seq
DB search
MDPILDGLNQAQRTAVASPSPVLQVLAPPGSGKTKTLTARVAYLLSHHGFRPQDVICCTF
TIKASREMRERLSRLIGEQVQSKLVLGTFHSICRRYLVAYGHLIGLRKGFGIADSNDSLA
IIKRIVKRSRLNILPNTARSRISSQKAQGISWEEVAEKTKTQNVEQQEFVKVYRDYESAL
AASNLLDYDDLLLRCADLLRSHPQCVSNVQAVLVDEFQDTNRIQFELMNLLASCQRCITI
VGDPDQSIYGFRSAEIKNLERMQRLYSNTSVVLLEDNYRSSGSILGSAEEVIQQDTSRPV
KKLLPTHGVGTMPVLRKLPSAAAEAQWMVTEIKRCIALTGSLLKHSDFAVLLRSASLSRQ
IESEMGKQGVPYRMVGGSRFFDRVEIRLLLDYLRVISHPENNDALIRIINTPARKMGEET
IKTLTTGAEKDKLPLWNYVKDVAQGRRSTQKNLSKAADVGLSGFVGLIESARRKLEECAD
ASSPKILLEFIIKKLGFREYLGVTYPLDEENRWANVEELLAQAGDPSVEASQDDALADID
GLEQQQGHAGEEALSRFLANVALSTEVKTEENQAEEKVTISTIHAAKGLEWPVVFVAAVY
EGIIPHSRAEDSDEERRLLYVAMTRAQALLYLSLPRRDSKNGEETRPSSFLPRTITETKF
RQVGPKLHDQIIFDIAEILRRPRPSQEAMVEGLKGLPSIYDDMWNPDGDDDGPNKATRWD
GSEAGQESWAKRRRLNNGEGGTVGGFVGSSTYTMSNSSHFSVSTSTLSVGFSTARQQMEM
TPDTAPKDTVSKEDTAPKEKQKRETATSSRTASTATQGTLSRYFGVTEPTSQSKTSLPSI
PNKQQHFPQSKPPLPPSVQVPPSLGGHRIQPQQFRRPTPTNSSTNYTWLSEASTSTRTVD
STKKDAATATATATTTAVNEIKRPVDSNCGVRPAATFHTTSMSTLQQQPGPRKTLGIRRS
VHNGWAERMNRG
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatccgatcctcgatggcctaaaccaagcccagcggacagcagtggcctcgccctcc
ccagtcctccaggtcctcgcaccccccggctccggcaagaccaagaccctgaccgcgcgc
gttgcgtacctcttgtcgcatcatggcttccgccctcaggacgtcatctgctgcacgttt
acgatcaaggcaagtcgcgaaatgcgcgagcggctgtcgcgcttgattggggagcaggtg
cagtcgaaactggtactgggcactttccattcgatttgtcgtcggtatctcgttgcgtat
gggcatttgattgggttgaggaaagggtttgggattgcggatagcaatgatagtttggcg
attatcaaaagaattgtcaagcgctcgcgtctcaatatactgcccaacaccgcacgatcg
agaatatcaagccaaaaggcgcaaggaatcagctgggaagaagtggcagaaaagacaaaa
acccaaaacgtcgaacaacaggaatttgtcaaggtctaccgtgactacgaatccgcattg
gcagcctctaatctactcgactatgacgaccttctcctccgctgcgccgatctcttgcgc
agccatccgcaatgcgtctcgaatgtgcaggccgtcctggtcgatgagtttcaggataca
aaccgcattcagtttgagctgatgaatttgctggcgtcttgtcagcgttgtattaccatt
gtcggtgacccggaccaaagtatctacggctttcggtcggctgagattaagaatttggaa
cggatgcagcgtctgtacagtaatacatcggtggtgctgctagaagacaattaccggtcg
tctgggtcgattctgggatctgcagaagaagtcatccagcaagacacgtcacgtcccgtg
aaaaagctgctccccacgcacggggtcgggacgatgccagtcttgcgaaagctaccctcg
gcagcagcagaagcacagtggatggtgacggagatcaaacgatgtattgcgcttacaggt
agccttctcaaacactctgattttgccgtgctgctccggtcggcgtccttgtcgaggcag
attgaatcggaaatggggaagcagggtgtgccttatcggatggtgggaggttcgaggttt
tttgatcgcgttgaaatccggcttctactagactaccttcgcgtcattagccatccggag
aataatgacgcactcatccgtatcatcaacaccccagcaagaaaaatgggcgaagagacg
atcaagacgttgactacgggggcggaaaaggataaactaccattgtggaactacgttaaa
gatgttgctcaggggcgcaggtcgacccagaaaaatctatctaaagccgcagatgtcggt
ttatccggttttgttggactgatagagtctgcgagacggaagctggaggaatgtgctgat
gcgtcttctccgaagatcctactggagtttatcatcaagaaacttggtttccgggaatat
ctcggagtcacgtatcccctggatgaagaaaaccggtgggccaatgtggaagagctcctg
gctcaagccggcgacccaagtgttgaagcttcacaagacgacgctctcgcggacattgat
gggctagaacaacagcaagggcacgctggcgaagaggcattgtctcgtttcttagcaaac
gtggctttatcgaccgaggtcaagacggaggaaaaccaagcggaagaaaaagtcaccatc
tcgaccatccacgcagccaagggactggaatggccagttgtgtttgttgctgccgtatac
gagggcattattcctcactcacgcgccgaagacagcgacgaggaacgacgactgctgtac
gtggccatgacgagagcgcaggcgctcctctacctcagccttccacgccgcgactcgaaa
aatggggaagaaaccaggcccagctcatttctacctcgcacgataaccgagacaaaattc
cgccaggttgggccgaagctccacgatcaaataatcttcgacattgccgagattcttcgt
cggccgcgtccgagccaggaagccatggtggagggtctcaaggggttgcctagtatttat
gacgatatgtggaatccggacggagatgacgatggcccgaacaaggctaccaggtgggat
ggctcggaggcaggtcaggagagctgggcgaagcgtcggcgattgaacaacggcgaaggg
ggcacggttggtggctttgtcggctcgtctacgtacacgatgagcaactcgtcgcatttc
tccgtgtcgaccagcaccttgtccgtgggcttttcgactgcgaggcaacagatggaaatg
acgcctgatacagcccccaaagacactgtctccaaagaggacacagccccaaaagaaaag
cagaaaagggagactgctacaagcagcaggaccgccagcacggcgactcaggggacgctc
tcgagatactttggcgtcacggaacccacgtcacagagcaagacgtcattgcctagcatc
ccaaacaaacagcagcactttccgcagagcaagcctcctcttcccccttctgtccaggta
ccacccagcctcggaggtcaccgcatccagccacagcaattccgccgcccaacgccgacg
aattccagcaccaattacacgtggctgtcggaggcgagcacgagcacgagaacagtcgac
tcgacgaaaaaagacgcagcaaccgcaaccgcaacagcaacaacaacggcggtcaacgag
attaaaaggccggtcgacagcaactgtggagtccgtccggctgccacgttccacacaaca
agcatgtccacgttacaacagcaaccggggccacgaaagacgctggggatccggcgcagt
gttcacaatggttgggcggagaggatgaacagggggtag
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