Talaromyces rugulosus: TRUGW13939_10084
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Entry
TRUGW13939_10084 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trg03041
]
TRUGW13939_10084
03036 Chromosome and associated proteins [BR:
trg03036
]
TRUGW13939_10084
Spliceosome [BR:
trg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
TRUGW13939_10084
Chromosome and associated proteins [BR:
trg03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
TRUGW13939_10084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_PARP14_3
Nup35_RRM_2
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
RRM_Nup35
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
55997565
NCBI-ProteinID:
XP_035349090
UniProt:
A0A7H8R9E4
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All DBs
Position
V:complement(join(4515658..4516353,4516408..4516764,4516821..4517045,4517100..4519616))
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AA seq
1264 aa
AA seq
DB search
MDINSLLSPQESAAQSRQSTPASSTTKSSASASSAPSVKTSPHKGSRRGRSGQSKFSSGP
SPVARQALESRLPDRASGTPNNHNGPPGNGNTAFNEVQQPRHQSTSINTLADVAALQGQQ
SQNQKDQLSTFSPLYPTPKPASNLQNPPRAPESRELIKRNYSQTSLPPEAQQQASQLFSH
IQENPHSYESHVQFVRLLHTGFVNHVYPPHNPDAHGDPRSYDLLKDLRGAREDMDRLFAM
GEDLWVEWIQDETLIAHSVDERIAVIELCQRSVEEEYGSTKLWAMFGDWMLYLYNAAMGQ
SDQNQWSEEDRLVGREVFSWESVVDVWQRGADATRWRISDSHRVWNKFLDLSVQDLNHAR
SSDRVPQVKALFDSRLQTPHATWDETSQLFSTFVTRYYSGNYEELMVDTNARAADAKYKY
ASRQDFELKVQRAEDSNDRNLEWAVYSEYIEWELSRHPEKRVYSPQLINALYQRALLRFP
TDVAMWEDYVTFLIQPSMAPTHHQIAPILPTLERATRHCPWSGTLWSQYILVAEREGLSF
DEIVKLKHKATSTGLLDAGGLEEVIKVHTMWCSYLRRRAFLPDAIDEDLDVAEVGIRSAI
ERVQELGENKYGKSYQGDPYFRLERIYTRYLSESGSWDSAREYYKSLIPRRGNSYEFWLD
YYNWEIMSWRTFVEAAMTPEAARRTPGPSYATAVLKQAIKRPDLDWPEKVMTKYFAHCED
YEDAEELQEAFVETQKAMKAVVRRRQKEALEQAAVQQEAAATAAQAEADSTAAASKRKRE
EEASDVSRLPNKKARPEEPAIVENEEPAEAKRDRENSTVIVKHLPVNVTESQIRQFFREC
GTINDIMFLPSEQDFTTAIVEFDSKEDAATALTRDQKRIDGQTVDVEIGSGSTLYVTNFP
PTADEAHIRNLFGEFGEIVDVRFPSLKYNTHRRFCYVQFKSASEAIAATKLDGKVVGDNL
RLQVKISDPSRKQDRHGPVYEGREVHVSNIDFAASESDLKEAFSKYGTVELVRLPTKVNG
DRRGFGFVVFSSPEEATASLAMHKQEFRGRPLQVKVSTPTAVKRSALVVSHKDKSPSVEP
NGISPRPDTEGDDRGSRTLGLMNIPDTVNDSRIRAIAERFGTLVKIVLRPDHEGAIVEFA
DINAAGKASLKLEGHEIVPGRRIRVGTARDVTRQKIEQKVGTTKAKSIPTPSVLQMSGPI
KRPTQPGARGGGRRGGLGFKRSGATAPDRSHDQEMAVDSGSGDAEKKPQKSNDDFRAMIQ
GSGK
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggatattaattcactactttcaccccaagagtcggctgcccagtcgaggcagtcaacc
ccagcatcctccaccaccaagtccagcgcgtcggcttcttctgcgccttctgtcaaaacc
tcacctcacaagggttcacgaagaggtcgctctggtcaatcgaaattcagctcaggtcca
tctccggtcgcgcgtcaggccctcgaatcccgtctccctgaccgggccagtggcaccccc
aacaatcacaacggtccgcctgggaatggcaacaccgcatttaatgaggtgcaacaaccg
cgtcatcagtcgacatccatcaatactctggctgatgtcgcggccttgcaaggccaacaa
tctcaaaatcagaaagaccagctgtccaccttttcgccgttatacccaacccccaaaccg
gcatcgaacctccagaaccctccacgagcccccgaatctagagagcttataaaaagaaat
tactctcaaacctcactgcctcccgaggcgcaacaacaagcgtcccaattatttagtcat
atccaagagaaccctcattcgtacgagtcgcatgtgcagtttgttcgactacttcacacg
ggttttgtcaaccacgtatacccaccccacaacccggatgctcatggcgacccgagatcg
tacgatctgttgaaggatttgcgcggtgcgagagaggacatggatcggctctttgccatg
ggtgaggacctctgggtcgaatggatccaagatgagaccctgatcgcacactcggtcgac
gaaaggatagccgtcatagagctctgccaacgatctgttgaagaagaatatggcagcacg
aagttgtgggctatgtttggagactggatgctctatctttacaacgccgcgatgggccag
agcgatcaaaaccagtggagtgaagaagatcgattggttggacgagaagtctttagttgg
gagtctgtggttgatgtatggcaacgaggagctgacgccacacgttggcgcatcagcgac
agtcatcgcgtgtggaataaatttcttgatttatctgtacaggacctgaatcatgcgcga
tcatctgatagggttccgcaggtgaaggcactattcgattctcgcttgcagactcctcat
gccacgtgggatgagacatcccaactattttcaaccttcgtcactcgttattacagcggc
aattacgaagaactaatggtcgacaccaacgcgcgagcagccgacgcaaaatacaaatac
gcgagtcggcaggactttgaactgaaggtacagagagcggaggactcgaacgatcgcaat
cttgaatgggcagtctattcagaatacattgagtgggagctcagccggcatcctgaaaaa
cgcgtctacagtcctcagctgatcaatgccctttaccaacgggccttgctacgatttcct
accgatgtggccatgtgggaggattatgtgacgttcctgatacagccatcaatggcacct
actcaccaccaaatcgctcctattcttcctaccttggaacgtgcgactcggcattgtcct
tggtcgggaaccctgtggtctcagtatatacttgtcgcagaacgcgaaggcctctcgttc
gacgagatcgttaaactcaagcacaaagcgacaagtactggtctgctagatgccggcggg
ttggaagaagttatcaaagttcatacaatgtggtgtagttatctgcgtcgacgagctttt
ctaccggacgcgatagacgaagatttggacgttgccgaggttggcattcgctcagcaatt
gagcgagtacaggaactcggcgagaacaagtacggcaagtcataccagggcgatccttac
ttccgcctggaaagaatctacactcgatacctgagcgaaagcggaagctgggatagcgct
agggaatattacaagagcctgattcctcgacgcggcaacagttacgagttttggttagat
tactacaactgggaaatcatgtcttggcgaacctttgttgaggcggcgatgacccctgaa
gccgcgagaagaacgcccggtcctagttatgccacggctgtgttgaaacaggcaatcaag
cggccggacttggactggcctgaaaaggtgatgaccaaatactttgcacattgcgaggac
tacgaagatgccgaagagctccaggaagcctttgttgagacgcagaaggcgatgaaagct
gtggtccggagaagacagaaggaggctcttgaacaagcagcagtgcaacaagaggctgca
gctacagcagcacaggccgaagcggacagcaccgctgctgcatcaaagcgaaaacgcgaa
gaggaggcctcggacgttagtaggctgcctaacaagaaggcccggcctgaagaacccgct
attgtcgagaacgaagagccggcagaagcgaagagagaccgggaaaactcaactgtgatt
gtgaaacacttgcctgtaaatgtgaccgaatcccaaattcggcaattctttcgcgagtgc
ggtaccatcaacgacattatgtttttgccttccgagcaagactttacgactgcaattgtc
gagtttgattcgaaagaggacgctgcgacagctctaactcgagaccaaaaacgcattgac
ggtcaaaccgttgatgtagaaataggcagcggctcgacgctctacgtgaccaactttccg
ccaacggcagatgaggcccatatcagaaatttgttcggcgagtttggtgaaattgtcgat
gtgcgattcccatctctgaaatataacactcatcgtcggttctgttacgttcagttcaag
tcggcaagcgaagcgattgcggcgacaaagttggatggcaaagttgttggtgacaaccta
cgcctacaggtcaagatctcagacccatcccggaaacaagaccgtcatggtccggtatac
gaaggacgcgaggttcacgtttccaacatcgatttcgcagccagcgaaagtgatttaaag
gaagcattttctaaatacgggactgtagagttagtgcgactgcctacaaaagtcaacgga
gatcgcaggggttttggctttgttgtcttttcttctccggaggaggcaaccgcatccctt
gcgatgcataaacaagaattccgtggccggccactgcaagtgaaggtgtcgacacctaca
gctgtcaaacgatcagcgcttgttgtctctcacaaagacaaatcgccgtcggtcgagccc
aatggcattagccccagacctgacacggaaggggacgatcgtggctctcgaacgctaggc
ttgatgaacattccagacacggtaaacgacagtcgcatccgagctattgccgagcgattc
ggcacccttgtcaaaattgttctacggccagaccatgaaggtgcaattgtcgagttcgcg
gatatcaacgcagctggtaaggcatctctgaagttggagggtcatgagattgtaccaggt
cgtaggattcgggttggcacagctcgggacgtgaccagacagaagattgagcagaaagtc
ggtacgaccaaggccaagtccattcctacgccgtctgtgttacaaatgagcgggccaatc
aagcgaccaacgcagcctggagctcgcggaggtggtcgccgtgggggactagggttcaaa
cgcagcggtgctacagcaccggatcgaagccatgatcaggagatggcagttgactctggc
agtggtgatgcagagaagaagccacagaaaagtaacgatgattttcgggctatgatccag
ggtagcggaaaataa
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