| Entry |
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| Name |
(RefSeq) uncharacterized protein
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| KO |
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| Organism |
trg Talaromyces rugulosus
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| Brite |
KEGG Orthology (KO) [BR:trg00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:trg03019]
TRUGW13939_11004
03041 Spliceosome [BR:trg03041]
TRUGW13939_11004
03036 Chromosome and associated proteins [BR:trg03036]
TRUGW13939_11004
Enzymes [BR:trg01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TRUGW13939_11004
Messenger RNA biogenesis [BR:trg03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
TRUGW13939_11004
mRNA cycle factors
Common to processing body (P body) and stress granule
TRUGW13939_11004
Spliceosome [BR:trg03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
TRUGW13939_11004
Chromosome and associated proteins [BR:trg03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
TRUGW13939_11004
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
VI:complement(join(1851385..1851764,1851813..1851898,1851945..1852778,1853091..1853376,1853430..1853578,1853631..1853824,1853883..1854034,1854088..1854167,1854217..1854580,1854629..1854822,1854882..1855222))
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| AA seq |
1019 aa
MDSFDTQEMAAALPDTEEPKSRMDAAAAAVAREKGWVEPEKYDYAKYNAPPVRPVAEGAP
TEVHAFESDLAWASDARRYEWKEEYGDVGPEDKELEQQLFRGEFINRAGVKFENIKQIKV
TAESTERPAPIVNFDDAGLHPVVLSNVRLCGYKVPTPIQAYSIPAVLKGHDLIAVAQTGS
GKTAAFFIPVLSKLMGKAKKLAAPRPRITGPDFDFRTHGVVAEPLVLVIVPTRELAYQIF
DEARRLCYRSMLRPCVVYGGGPSKSQMDELRKGCDILIGTPGRLNDFIGKSNLLSLKRLK
YTIIDEADELLHADWEQEFSSILTGADANEDADHCYMMFSATFNKECRQLARKYLAADHV
RIRIGRAGSTHINIQQQIVYVNFELKKKCLYDLLLSMPPARTLIFVNTKLEADLVDDFLY
NKGLPSTSIHSDRTQREREDAIRAFRTAEAPLLVATAVSARGLDVKNVMHVINYDLPSAD
HGGISEYVHRIGRTARIGNEGFATSLYTDKNSDIAPDLVKLLMEAKQEIPDFLEEFKPEG
DLEFRDDDTDTEGEDEMGNAKAENGSASGEPAKADQGQGGWGGADDCYYLSTVTMASPFW
FALLLCASAVRGMMPNRVEQGDLVIDTFDSSPFNDLGFWHGAGENLRIRYSYDDEGSFVK
LSPSDPDHNYHTQLSDSCFDLSDYEDMYLHVSYSGSNKFSISIYQNNGDCNADRAPYPGT
SDSVEASRYAVDDEDIYVPLSHFYIDLTLASSIAFHGFYTRENVYLRHVEIVEEIPEDVE
IPRKLPTGTLVLNCKRPDSFAFGIDDGDPQLAQEVMDILEDEGIKVTFFVVGKGIMDEST
NLTNVYAEMLRRGHQVALHSYTHPKMEGLRAVDDIDFEIMDGYYAVEDLLGVQSRYFRPP
YGTVGARMRQRLAALIDDPYIVNWSVDIEDWLWANSDHPEKQLAAFRRDVARGGDIVVMH
YLTWSTVQYFREVIQVARDTGKQIMRVDQCMMDPDAPPLPEDEEAWNMQAQNILRVGGG |
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| NT seq |
3060 nt +upstreamnt +downstreamnt
atggacagctttgacacccaggagatggccgcggccctccccgacaccgaggagccaaag
agccgcatggatgctgcagcagccgctgtcgctcgcgaaaagggctgggttgagccggaa
aagtacgactacgccaagtacaacgctcctcccgttaggcctgtagctgaaggtgccccc
actgaggtccatgctttcgaaagcgatctcgcctgggcctccgatgctcgcaggtatgag
tggaaggaggagtatggagatgttggtccagaagacaaggaactcgaacagcagcttttc
cgtggcgagttcatcaaccgtgctggagtaaagtttgagaacatcaagcagatcaaggtg
actgcagagtcgaccgagagaccggcaccaattgtcaactttgacgatgcaggtcttcac
ccggtcgtgcttagcaatgttcgtctctgtggctacaaggtcccgactcccatccaagcc
tactcgatcccagccgtcttgaagggtcacgatctgattgccgttgcccagactggctct
ggaaaaacagctgctttcttcattcctgttttatcgaagctaatgggcaaggccaagaag
ctagcagctcctcgaccaagaattactgggccggattttgattttcgcactcatggcgtc
gttgccgagcctttggttttggtaattgtgcctactcgcgagctggcctatcaaatcttt
gacgaggcccgtcgtctatgctatcgttcaatgctgcgtccatgtgttgtgtatggcggt
ggcccatccaagtcccaaatggatgagcttcgaaaggggtgtgatatcctcatcggcaca
ccgggacgtctaaacgacttcattgggaaaagcaaccttctgtccttgaagcgtctaaag
tacacaatcatcgacgaagctgatgaacttctgcatgctgattgggaacaagagttttct
agcattctcaccggtgctgacgccaacgaggatgccgatcattgttacatgatgttctcg
gcaacattcaacaaggagtgccgtcaacttgcacgcaagtatcttgctgctgaccatgtc
cgcatccgcattggccgcgcaggaagcacacatatcaacatccagcagcaaattgtctac
gtcaatttcgagttgaagaaaaagtgcctctatgatttgcttctgtcgatgccgcctgct
cgtaccttgatctttgtcaacacaaagctcgaagcagatttggtggacgactttctatac
aacaaggggctccctagtacctcgatccacagtgatcgtactcagcgtgagcgtgaggat
gctattcgggcttttcgtactgctgaggcgccactactcgttgctacggctgtttcggca
cgtggtctcgacgtgaaaaacgtcatgcacgttatcaattacgaccttcctagtgcagac
catgggggcatcagcgaatacgttcaccgcatcggtcgcactgcacgcattggtaacgaa
ggctttgccacatcgttgtacaccgacaagaacagtgacattgcccctgacctggtcaaa
ctcctcatggaggctaagcaagagattccagactttctcgaggaattcaagcctgaggga
gatcttgagttccgtgacgacgataccgacaccgagggcgaagatgagatgggcaatgca
aaggctgagaacggttctgcttctggagagccagccaaggctgatcagggacagggtggc
tggggcggcgcagacgactgctattatctttctactgtcaccatggcttctcccttctgg
tttgccctcttgctgtgtgcatcggcagtgcgagggatgatgccgaatcgcgtggaacag
ggcgacctggttatcgacacgttcgacagcagccccttcaacgacctcggattctggcac
ggcgccggcgagaatctcagaatcaggtattcctacgacgacgagggcagtttcgtgaag
ctgtctccatccgacccagaccacaattatcatacccagttatccgactcgtgtttcgac
ctctccgactatgaggacatgtatcttcatgtttcgtactctggcagtaacaagttttcc
atctcgatttatcagaataacggagactgcaatgcagatcgggcaccgtatcccggcacc
tcggacagtgttgaagcgtctcgctatgctgtcgacgacgaggatatttacgtccccctg
tcacatttctacattgaccttacgcttgcttcatcgatagcctttcacgggttttataca
cgagaaaacgtttaccttcgacacgtcgagattgtggaagaaataccagaagatgtcgag
attcctcgcaagttgcccacgggaacactagttctcaactgcaaacggccagactcgttt
gcgtttggcatcgacgacggagacccccagctggctcaagaagtcatggatattcttgag
gatgaggggattaaggtcacgttttttgtggttgggaaggggattatggacgaaagtacg
aatctgacgaatgtgtatgcggagatgctacggagggggcatcaagttgctcttcattcg
tatacgcacccaaaaatggaaggactccgggcggtggacgatattgattttgagattatg
gatgggtattacgccgttgaggatcttcttggagttcagtcacgatactttcgtccgcca
tatggtactgtcggggcgcgcatgagacaacggcttgcagctctgatcgatgacccgtac
atagtcaactggagcgtggacattgaagactggctctgggccaacagcgaccatcccgag
aaacagctggccgcattccgccgcgacgtggctcgagggggggatatagtggtgatgcac
tatctgacctggtcgacggtgcagtatttccgcgaggtgatccaggtggcgcgagacacg
ggcaagcagattatgcgagtcgatcagtgcatgatggacccggacgctccgccattacct
gaagacgaggaggcgtggaatatgcaggcgcagaatatactgcgagtgggtggtggttag |
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