Talaromyces rugulosus: TRUGW13939_11394
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Entry
TRUGW13939_11394 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_11394
Enzymes [BR:
trg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TRUGW13939_11394
5.6.2.5 RNA 5'-3' helicase
TRUGW13939_11394
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TRUGW13939_11394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
Viral_helicase1
AAA_19
SLFN-g3_helicase
NAT10_TcmA_helicase
IstB_IS21
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
55998872
NCBI-ProteinID:
XP_035350395
UniProt:
A0A7H8RET4
LinkDB
All DBs
Position
VI:join(2957699..2958713,2958745..2960616,2960666..2960695,2960746..2961161)
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AA seq
1110 aa
AA seq
DB search
MATSSKYDGFFRLQGGRDYPRQDLLRATRRFPVRVCFPESASQPIHAFCVIHPSSQSPDI
TISFGDKKLEHEPSVVFSFPHCILEFYLEGDGEYGNDKIKEWRATKPNWFTPTKNFETPK
AVACIDISTRDPITVGQFNLLSSEEQGKWRAMLSGLENGNIVLIPTFPSHNAPLKDMFTW
LSLLQGKILNNLQPVSILEDAGNVRRGFWWYYECIAKKDDKDLSPMEPYPWMWHNKDGRL
QYNPQPVIRPYFLDSHERKLSLVPGLKVERQEQISIIERIFNKNRVHKSTICLADNGKKQ
IHVSVVKPIEYATVEIPELPEKTEVRFKITDNSGSSTVAADLVLITRHGLPLIDLGPHYD
IVLEIKPNLRPIEDQIAAIIKSGEPEVVFGDKTENWAQGFSLHRTVLAHGCELDPSHGSF
FKWSILERTSLDLETARWRINSIKKACRLDTTQLEAYEKSLFYMVAGMSLVQGPPGTGKS
HLGVAIIVTVASLGFKVLLTAGSNKAVDNLSAAVTKFLNRNPEVKTWCGEFVRARTPGYQ
LSLFHELIVGSSESHGPAKNKTDADTILENIQLPLMVKKLVYNDPYSSKYMQRFVGLISE
YISAKGHLSADKSKAFKSDYQLIAAEIAKESSIVASTLSNSAHDFLLSFQPDFVICDESG
QCTEGESMIALSKPSVKAFVLLGDPQQLAPTIITEQSVNPNPEIGFIKRSLMERLKEAGY
PCSMLRTNYRCHPEVLDFFNRTVYKGQLTKPAGFVHDGSIGYIWDSFTRNNRDFILACQQ
NKRRVFLTVDSVATKPESSTSWVNHQQADVALDLLKDLYKHKAPDGRSITAVDAMLISPY
KAQRNLLTEKALERGIPLPENLTVDASQGQEANLVIYMLVKPGVNPKQIGFVADSRRLNV
ALSRAKDALVIIGNSKAWSKQLMEEMKYNKTQAVLRALITDVQDKANIVPVRPLLGAPPL
TQSLLGAPPPTQSDDMDVDSNAGDAVAVGGAKTHRPRSPPANMPELTDRLKRARVNPPGG
SRTLGESGTRQLSEEYKATRNAEMEALDLVLGLGQQIRVLEETADQVDARFFDAGPGLER
LKIEFEEAKEAHKNVYNRRRELENAGKKYK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcctcgaaatatgatggatttttccgcctccaaggaggacgagactatcca
agacaagatctgcttcgcgccactcgccgatttccagtccgtgtctgcttcccagaaagt
gccagccagccaatacatgctttctgtgtcattcatccttccagtcagagtcccgatatc
actatttcattcggtgacaaaaaactggaacacgaaccgagtgttgtcttcagttttcct
cattgcatcctggaattctacctggagggagatggagagtatggcaatgacaaaatcaaa
gaatggcgagccacaaagcctaactggtttacgcctaccaagaattttgaaacccccaaa
gccgtcgcctgcattgatatcagcacaagagaccctattacggtcgggcagttcaatttg
ctctcgagcgaagaacagggaaaatggcgagcaatgctctcgggcctggaaaatggaaac
atcgtcctcatcccaacttttccctcccacaacgctcccctcaaagacatgttcacctgg
ctttctctactacaaggcaaaatcctgaacaacctccagcctgtcagcatcctcgaggac
gcaggcaatgttcgaaggggcttttggtggtactacgaatgcattgccaaaaaagacgac
aaagacctatcaccaatggaaccatatccatggatgtggcacaacaaagatgggcgcttg
cagtacaacccacagcccgtaatccgcccatatttccttgacagccacgagcggaaactg
tcgctagttcctgggctgaaggttgaacgtcaagagcagattagtatcatcgagagaatc
ttcaataagaacagagtgcacaagtcgacaatctgcctcgccgacaatggaaaaaagcaa
atccatgtctcagttgttaagccaattgaatacgcaaccgttgaaatcccagaactaccg
gagaagacagaggtgcgtttcaaaatcaccgacaattctggctcgtctacagtcgcagcc
gacttggtcttgataacgcgccatggcttgcctttgattgaccttgggcctcactacgac
attgttcttgaaataaagcccaacctacgcccgatagaagatcaaattgcggctatcatt
aagtctggggagccagaggtggtcttcggtgacaaaaccgaaaactgggctcaaggtttc
tctctccaccggacagtgcttgcccatggttgcgaattggatccttctcatggatctttt
ttcaagtggagtattctggaaagaacaagcctggacctggaaacagcgagatggaggatc
aattctatcaagaaagcttgtagacttgatacgacacaactcgaggcgtacgagaagtcc
ttgttctacatggttgctggtatgagcctagttcagggtcctccaggcaccggaaaatct
cacctgggcgttgctatcattgtcactgttgctagtcttgggttcaaagtacttctcacc
gccgggtcaaataaggcggtcgacaatctctcagcagcagttacaaaattcctgaacaga
aaccctgaagtaaaaacctggtgtggcgagtttgttcgcgcccgtactccggggtatcag
ctgagcctgttccatgagcttattgtcggaagctcagaaagccacggcccagctaagaac
aagaccgatgctgacaccatcctcgagaacatccagcttcccctgatggtcaaaaagctt
gtctacaacgacccttattcgtccaaatacatgcaacgatttgtcggactgatctctgaa
tatatatcagccaagggtcatctaagtgccgacaagagcaaggccttcaagagtgactac
cagctgatagcagccgagatcgcgaaagaatcgagcattgtggccagtacccttagcaac
tctgcgcacgattttcttctaagtttccaacctgactttgtgatctgtgacgaatctgga
cagtgcaccgagggagaatcaatgatcgccttgtcaaagccgtcggtcaaagcttttgtt
ctcctcggcgacccgcagcaattggcgccaaccatcatcaccgagcagtctgtcaatcct
aatcccgagatcggattcataaagaggtcactcatggagaggctcaaagaggctggttac
ccttgttcaatgctcaggacgaactaccgctgccatcctgaggtcctggactttttcaac
cgtaccgtctacaagggccagttgacaaaaccagccggtttcgtccatgatggctctatt
ggatacatctgggacagcttcacaagaaataaccgagacttcattctggcatgccaacag
aataaacgacgagtgttcctaaccgttgattctgttgctactaagcctgagagttcaacg
tcgtgggtcaatcaccagcaggcagacgtggcactggacttgttgaaggacctctacaag
cacaaggcaccagatggacggtctattactgccgtcgatgcgatgctcataagtccgtac
aaggcgcaacggaatctgctgactgaaaaggcactagagcgtggaatcccactccccgaa
aacctcactgtcgatgcctcccaaggccaagaggctaatcttgtcatctacatgttggtt
aagccaggtgtgaacccgaagcagattggctttgtggcagattctcggcgcctcaacgtc
gccctcagccgagccaaggatgctcttgtgataatcgggaactcgaaagcctggagcaag
cagctgatggaggaaatgaagtacaacaagacgcaagcggttcttagagcacttattacc
gatgtgcaggacaaggctaatatcgttcctgttcgtccccttttgggtgcccccccgctc
actcaaagtcttttgggtgcccccccgcccactcaaagtgacgacatggatgtcgatagc
aacgctggagatgctgttgcggttggtggagctaagactcatcgaccgagatctccgcca
gccaacatgccagaattgacagaccgactaaaaagggctcgtgtcaatccgcctggaggc
agccgaaccttgggtgagtcgggcactcgccagttgagcgaggagtacaaggcaaccaga
aacgccgaaatggaagccctcgacctggtgctggggcttggccagcagatccgtgtcctt
gaagaaacggcagaccaagttgatgcgaggttttttgatgcagggccaggtctagagagg
ctgaaaatcgagttcgaggaagcgaaggaagcccataaaaatgtgtacaatcgcagaagg
gagttggaaaatgcaggaaagaaatacaagtga
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