Talaromyces rugulosus: TRUGW13939_11515
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Entry
TRUGW13939_11515 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
trg
Talaromyces rugulosus
Pathway
trg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TRUGW13939_11515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_11515
03009 Ribosome biogenesis [BR:
trg03009
]
TRUGW13939_11515
03036 Chromosome and associated proteins [BR:
trg03036
]
TRUGW13939_11515
Enzymes [BR:
trg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
TRUGW13939_11515
Messenger RNA biogenesis [BR:
trg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TRUGW13939_11515
Ribosome biogenesis [BR:
trg03009
]
Eukaryotic type
90S particles
RNase
TRUGW13939_11515
Prokaryotic type
rRNA processing factors
TRUGW13939_11515
Chromosome and associated proteins [BR:
trg03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
TRUGW13939_11515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
55998993
NCBI-ProteinID:
XP_035350515
UniProt:
A0A7H8RF53
LinkDB
All DBs
Position
VI:join(3275249..3275320,3275379..3276386)
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AA seq
359 aa
AA seq
DB search
MGEKRQHKDGSSNIDRVVASKKSKGNHFHDESEITRPKTGIGRRHDGETLIEKLQGVVNE
VVKHPEALGSHPKSSSILTIASQLQTVLAAASLPAITPPTHDHLSRTDKNLPELPPISNA
SLARAVFTHPGAHTNTNAEGPEETSYDRLEVLGDAYIEVAATKLIWRQFPNIPAGRISQI
REELVKNETLAEYATKYGFDTRLSVPPDHKDQLKRWKKTKGDVFEAYVAAVVLSNPVDGD
EIVENWLTQLWQPKLTGIERVQPVLKSKELLAKKVMGKGIKLRYVDERPPERLNGGMQTF
YVGVYLTGWGWENQHLGSGSGLNKTIAGDNAAQQALRNVPLIDQVADAKLANDAKVNDL
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaaagaggcagcacaaagatggaagctctaatattgatcgcgttgtagcaagc
aaaaaatctaagggcaatcattttcatgacgaatccgaaattacacgcccaaaaacaggg
attggccggagacatgatggtgaaacactcattgaaaaactacagggggtcgtcaatgaa
gtagtcaaacatccggaagccctgggcagtcatcctaagagctctagcattttgacgata
gcgtctcagctccagactgttttggcagcagcaagtctgcctgcaattacgccccctacg
catgatcatctatcaaggacagataaaaatttgcccgagcttcctcccatttctaatgcg
tcactggcgagagccgtgttcactcatccaggcgcccataccaacaccaatgccgaggga
ccagaagagaccagctatgatagactggaagtccttggagatgcatacattgaagttgct
gctacgaagctgatttggcgccaattccccaacattcctgccgggcgtatctctcaaatc
agagaagaactagtgaaaaatgaaacactcgccgagtacgctaccaaatacgggtttgat
acgaggctatctgtaccgccagatcacaaggaccagctaaaacgatggaagaaaacaaaa
ggtgatgttttcgaagcctatgttgccgctgtcgtactatcaaatccagttgacggcgat
gaaattgtcgaaaactggctgacgcagctatggcaaccaaaattgaccggcatagaacgt
gttcagccggtgctaaagtccaaggaacttcttgccaagaaggttatgggcaagggaatc
aagctgaggtatgtggatgaacgcccccctgagcgattaaacggggggatgcaaactttc
tacgttggggtgtatctgacgggctggggatgggagaaccaacatttggggtctggaagt
ggcttgaacaagacgatagctggagataatgctgctcaacaggcgcttcgcaatgtcccc
ttgatcgaccaagtggcagatgcaaaattagccaatgatgccaaagtaaatgatctttaa
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integrated database retrieval system
