Talaromyces rugulosus: TRUGW13939_11578
Help
Entry
TRUGW13939_11578 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K18725
nucleoporin POM152
Organism
trg
Talaromyces rugulosus
Pathway
trg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
TRUGW13939_11578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trg03019
]
TRUGW13939_11578
Messenger RNA biogenesis [BR:
trg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
TRUGW13939_11578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig-like_POM152
Ig_Pom152
Ig-like_Pom152_9
Ig-like_Pom152_1
TMD_POM152
Motif
Other DBs
NCBI-GeneID:
55999055
NCBI-ProteinID:
XP_035350577
UniProt:
A0A7H8RDA3
LinkDB
All DBs
Position
VI:join(3723087..3723509,3723566..3723714,3723772..3726735,3726796..3727003)
Genome browser
AA seq
1247 aa
AA seq
DB search
MNGTPRLRSAFPQTPQAQRGRNGSPQIPKLKDANMGGTQAPQENGAGGPLIPLRIVDAPS
QRLYVSAIYIALGAWRIYDSLGAFDELDSTWLFLKWNFIDGIFLFGIQALRIPWLEWTFP
TFLTIFLLHAATNVFLMFRIPLPVGAWATVLFKSFYDRELSISERSVKPGDIIHNASLIL
GKQIIHILPEGSAVLNPEHIPLCLGTQQQSVSLPVRINQSTPILIEILHFDLNTGKNDTI
AFSNKQLKQLRKKQPASTTGGDLQLPVKKPGIYRLSRVVDESNLEVQTKVSDALVPVCPK
ASPINTQTDRCKGDLSDIVLEVEGAPPLKIKYVRKVNGLDGGFSFQNIHSEGSASLAPNR
KLSGLLIDPEVPIPAWAQSQKLQIPLNESLNNGGQWVYAIEEVHDAYGNIANYSSLYDDA
DSSSGKGLLQSHQLSVHERPRLSLLGCNAQNFLQVAKGDSTELPLHFHSTGRDYSGDTPL
QITYSHSNADEPEQTGGLLKPNQLSLKSLDHRPRIKEPGWYSIDSVSSRYCAGEILEPSS
CLLYNPPEPELAVRYEKIFDKCANNSVGLLVDLDLVGTPPFTLRYNIESGKGVKPRSIRV
DGLRGSLDLTPTEAGKYRYRFIDISDSVYAARSLKDRAPVLEQDVKPPASAHFLRSQKLE
RSCYGESVSVDVSFVGESPWTLQYELTHNGKKVKHELQSHGTVASITTGPLLSGGEHVLS
LNSVTDRSGCKRALKDGFTIQVRPKKPSAGFGLIDEKRSVLALENSVVKLPLRLSGTPPW
VVKYRNMDVNSAKVVETRVWDENGLVSISDNGRYELVEVFDTTCPGTIDQSASVFEVDWL
PRPTVSVSGRTGIGEDNMKRSVCQGDDDIVELKLVGRPPFNVKYQHRQSRAHGALEVKVH
SLKSASSVASLVLDTKKPGDHQYEITDVSDSLYDFNPKRGYSVKVAQTVNALPSARFEAP
GHIYAFCKEDSEGDELIPIVLEGQPPFFLDISIKHHSSSKPEVVRVGPIPTNKHKLPIPR
RHLELGQHVVSINRVGDSRGCQRALDRDSSSVRVAVSDVPTIIPLESQTDYCVGERISFS
LSGHAPFEVFYTFEGVEKRALSPSTTFRRIAERPGQFTINAVSDGASGRCQARKNIGKTI
HEMPSVKISKGRESVVDIHEGGEAEMNFEFWGTPPFEFTYTRTSNPRKGEKPEVLDIKHD
VSYDHKKTIKISDEGTYEVVSIKDKYCSFSTQKLPGKVTKQAKALQN
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcactccccgacttcgttctgcctttccccaaactccgcaggcacaacgagga
cgcaatggttcacctcaaatccccaaactgaaggatgcgaacatggggggcacccaggca
ccccaggagaatggagcgggcggccctcttattcctcttcgaatagtcgacgcgccttcg
cagcgcttgtatgtttctgcaatctatatcgcgctgggggcatggcggatatacgattct
ctgggcgccttcgatgaacttgattcgacgtggctgtttttgaagtggaattttattgac
ggcattttcttgttcggcatccaagctttgaggataccttggttagaatggacatttcca
acctttcttacgatatttttgctgcatgcagcaactaatgtgtttctaatgtttcgtatt
ccattacctgttggagcctgggcaaccgttctgttcaagtctttttacgatcgcgaatta
tctatctcggagcgcagcgtaaagccaggcgacattatccataatgcctcgttgatcttg
ggcaaacagattatacatattcttcctgaagggtctgccgttttgaaccccgaacatata
cccttgtgtctcggcacgcagcagcagtctgtttctcttccagtccgcatcaaccagtct
acaccaattctcatcgaaatcttacacttcgacttgaacactggcaaaaacgacaccatc
gctttctcgaacaaacaattgaaacagttgcgcaagaaacagcctgcatctacaacaggc
ggtgatctgcaacttccagtgaagaagcccgggatttaccgcctgagccgagttgtagac
gagtcaaacttggaggtacaaaccaaggtatctgacgcattggttcctgtctgtcccaag
gcaagccctataaacacccagaccgaccgatgtaaaggagacctatcggatattgttctt
gaggtagagggggcccctcctctcaaaatcaagtatgttcgcaaggtcaatgggctcgac
ggcggattttcgttccagaacatacactctgagggtagcgcgtcattggcacctaaccgg
aaactttctgggctcctcattgaccctgaagtgccaattccagcttgggcgcagagtcag
aaattgcagattccattgaacgagtctttgaataatgggggccagtgggtttacgccatc
gaggaggtccacgatgcatacggcaatattgcgaactattcgagtctttatgatgatgct
gatagctcatcaggcaaagggcttttgcagtcgcaccagctttctgtccacgagcgaccc
cgtctttctttgcttggttgcaatgctcagaatttcctccaggtcgcaaaaggggactcc
acagagctaccccttcatttccactccactggaagagactacagtggtgatacacccctt
cagataacctactcacactccaatgccgatgaacccgaacaaaccggcggactcttgaag
ccaaaccaactgtcattaaagagtttagaccaccgaccgagaatcaaagaaccgggatgg
tactccattgactccgtgtcgagtcgttactgtgcaggagagattctggagccatctagt
tgtctactctacaaccctcctgaaccggaactggctgtccgctacgagaagatctttgac
aagtgtgccaataactccgtgggtcttctggtcgatctagacctagttggcactccgccg
tttaccttgcggtataatattgagagtggcaaaggcgtgaagcctcgcagtattcgggtg
gatgggcttcggggaagcttggatctcactccgactgaagcgggaaagtatcgctatcga
ttcatagatatttccgatagtgtatatgctgctcgatccttaaaagacagagctcctgta
ttggagcaagacgtgaagcccccggcatcggcacatttcttgcgctcacaaaagttagag
cggagttgctacggagaatcggtttctgtggatgtatctttcgtcggcgaatctccttgg
acactgcaatatgagcttacccacaatggcaagaaagtcaaacatgagctgcaaagccat
ggaacagtagcctcaattactactggaccattactgagtggtggtgagcatgtgctttca
ttgaatagtgtgaccgatcggtcgggctgcaaacgagctctgaaagatggcttcactatt
caagttcgccctaagaagccatctgctgggtttggtctaatcgatgaaaagaggtctgtc
cttgctcttgaaaattcagtagtcaagctgcctctcaggttgagcggaacgccgccatgg
gtggtcaagtaccgcaatatggacgtgaactcagcaaaagttgtggaaactcgagtatgg
gacgagaacgggctcgtttctatctctgataacggccgctatgagcttgtggaggtcttt
gatacgacttgtccgggaaccattgatcaatcagcgagcgtctttgaagttgactggctt
ccacgacctacagtctccgtgtcggggcgcaccggaattggagaggacaacatgaaacgc
agtgtttgccagggtgacgacgatatcgtggaactcaaactagtgggcagaccccctttt
aacgtcaaataccagcatcgccagagccgtgctcatggggctcttgaagttaaagtacat
agtctcaagagtgcttccagcgtcgcgtcattggttctggatacgaaaaaacccggagat
catcaatacgaaatcaccgatgtctcagacagtctttatgatttcaacccgaagagaggc
tactccgtcaaagttgctcaaacggtgaatgcgctgccctctgcccgctttgaagcccca
ggtcacatctacgcattctgcaaggaggatagtgagggcgatgagctcattccaatcgta
ctcgagggccaaccgccattcttccttgacatatccatcaagcatcattcgagctccaag
cccgaagtcgtacgtgttggtcctattccaaccaacaagcataagcttccgataccccgt
cgccatttggagcttggccagcatgtggttagcatcaaccgcgttggagattctcgcgga
tgccagcgcgcgctcgatcgtgactcctcttccgtccgagtcgccgtatcagacgttcca
acgattatacctcttgagtcccaaaccgactactgtgttggagagcgcatttccttctca
ctgtccggacacgcgccctttgaagtattctatacgtttgaaggtgtcgagaaaagagca
ctctcgccatccactaccttccggcgtattgctgaaagacctggccaattcaccatcaat
gccgtgagtgacggcgccagcggtcgctgtcaagcccgcaagaacataggcaagacgatc
cacgaaatgcccagtgtcaagatcagcaaggggcgcgagagtgttgttgatatccacgaa
ggtggagaggctgagatgaattttgaattttggggaaccccgccttttgaattcacgtac
acacgaacgtcgaatcctaggaaaggagaaaaacccgaggtcctcgacatcaagcacgac
gtgtcttatgaccacaaaaagacgatcaaaatctccgatgaaggcacctacgaagttgtc
tcgatcaaggataaatactgctcgttttcgacgcagaaactgccaggaaaagttacgaag
caggcaaaagctttgcaaaattga
DBGET
integrated database retrieval system
