Talaromyces rugulosus: TRUGW13939_11643
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Entry
TRUGW13939_11643 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K11292
transcription elongation factor SPT6
Organism
trg
Talaromyces rugulosus
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trg03021
]
TRUGW13939_11643
03036 Chromosome and associated proteins [BR:
trg03036
]
TRUGW13939_11643
Transcription machinery [BR:
trg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
TRUGW13939_11643
Chromosome and associated proteins [BR:
trg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
TRUGW13939_11643
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HTH_44
Spt6_S1
HHH_7
YqgF
SPT6_acidic
Tex_central_region
HHH_9
SH2
HHH_3
S1
GBV-C_env
Motif
Other DBs
NCBI-GeneID:
55999120
NCBI-ProteinID:
XP_035350642
UniProt:
A0A7H8RDC7
LinkDB
All DBs
Position
VI:join(3906648..3906827,3906877..3907053,3907113..3910794,3910849..3911117)
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AA seq
1435 aa
AA seq
DB search
MSTRDLIEGEAMLDDEENDEEFDEETGEPLHGPSTGKVPSYNDSSEEDDEEEDDEEAARA
VREGFIVDEDEEIEERAERRRERKKRRREERERDDVHLDQEDLDLIGEQNPNLKPPTTES
KFKRLKRGHKTEAPTDVFNWDEEEEADYGRPVHRRREDEMEGFIEEDEFSDEERQRIEDD
EEIARPVRKGISGLAITEATGLDENSLEDMRAAFGDGTDYLFALEMEEDEEEQQEEEEKR
LDLKDVFEPTLLAEKMLTDEDNEIRFTDEPERHQIARKPYKGLVLTDDEFREEAIWISNL
MLLRKQHIIEDNLQEPFQRAVAKVLEFMVTDDFEVPFIFQHRKDYLIHAAKVPSSPDPGN
PDAPEFVVRAQKLLNMNDLWDIFEHDLKFRAYIDKRHTLQKTYHKLQDMKIDDEIVDEML
SSATTMEELQDIQEYMHFQYGPQIKDISLSDEANGDVDGEVNGNGNGQPTQRRKAGANTL
FERIRKSSVYHLVRAFGITADAFAQAASQNRRGQYAEDPEQPPEEIADGVLDSDYSNSTS
ALRAAKAMFIEELVLNPRMRKVIREQCYRNGVVDCFRTEKGLRRIDEQHPYYEFKYLRDQ
QLTDIARRPELFLSMLKAEEEGLVNVKVTFQNFERYRRSLYSHIESDSQSDVADAWNRER
RDVLDAALGRLLKLLTRSVKENIRQNCENNVAKDLREVFSNKLDQSPYKPKGMVLGTVPR
VLAFSNGDAPVGGDHFIHWVWVEEEGRPQEHGKLAKLQLGDPERGVPDGFDVAAFVALVR
RRVPDVIAVSGKSPETRKLYKLLSDIVEHKDLRTAPYSVGEGKEAKEITDRLEVVMVNDE
TAQLYAHSPRAATDFPVKADWLTSYCCGIARYLQNPLKEYAALGKDLVSIQFIPGQRYLA
EEAVMKQLESALVDMVNLCGVDINDAVSDTGAQNLLQYVCGLGPRKASHLVKIVNMNGGT
VNNRVELLGVEAQYPAMGVKVWNNCASFLYLDWENVETDADPLDNTRVHPEDYDIARKMA
ADALELDEEDIKAETDESGPGAIVRKLLKDDLQDRVNDLILEEYAEQLEKNLNQRKRATL
ETIRAELQQPYEELRKQFVFPSTDEIFTMLTGETNETLADGMIVSMSIKRIAPDNIQGKL
DCGVEVLVPESDITDRHDIPPKALFQIHQSVQGKILYLNKKTFTCNMSLLEEKVSRGYQR
PIERPRGEWDDRQEQEDRDLLQEKTKTESRFVRVIKHPLFRAYSSKQAEEYLGGQNRGDC
VIRPSSKGPDHLTVTWKVSDGVYQHIDVLELDKENEYSVGRILKIGGKYTYSDLDELIVS
HVQTMARKVDEMMAHEKYQNGTRADTEKWLTTYTMANPKRSVYAFCINPKYPGYFFLCFK
AGQNAELQSWNVKVIPQGYELQRNPYPDMRALCNGFKLLFTNMQVGRVGQGIPRR
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccagggacctgatcgaaggcgaggccatgctggacgacgaggagaacgatgag
gaattcgacgaagaaaccggagagcctctgcacggaccgtccacaggcaaggttccctcg
tacaatgactccagtgaggaagatgatgaagaggaagacgacgaggaagctgctcgcgcg
gtccgggaaggtttcatcgtcgacgaagacgaagagattgaagaacgagcagaacgccgc
cgagaacgaaaaaagcgccgtcgagaagagcgtgagcgtgacgacgtccacctcgaccag
gaagatctcgatctcatcggcgagcagaatccgaatctcaaacccccgactacagaatcc
aagttcaaacgcctaaagagaggccacaaaaccgaagcccccaccgatgtcttcaactgg
gacgaagaggaagaagccgactatggcagacctgtccaccgtcgtcgcgaggacgaaatg
gagggtttcatcgaagaagacgagttttccgatgaagagcgccagcgtatagaagacgac
gaagagattgcccgtcctgtccgaaagggaatttccgggcttgctatcaccgaagctacc
gggctcgacgaaaactccctcgaagatatgcgcgccgcctttggagacggtaccgactat
ctctttgccctcgaaatggaagaagatgaggaagagcaacaggaagaagaagaaaaacgc
ctcgatctgaaggacgtctttgaacccaccctgctggccgagaaaatgttgacggacgaa
gacaacgagatccgtttcaccgacgagccagaacgccatcaaattgcacgaaagccgtac
aagggccttgttcttaccgatgacgaattccgcgaggaagctatttggatatccaatttg
atgctcctgaggaagcaacacataatcgaagacaatttgcaagagccattccagcgtgcg
gttgcaaaagtgttggaattcatggtcaccgacgactttgaggtcccttttattttccaa
caccgcaaggactaccttattcacgccgccaaggttccttcgtcgccggacccaggcaac
cccgacgccccagaattcgtggttagagcccaaaagctgctgaacatgaacgatctgtgg
gacattttcgaacacgacctcaaatttcgcgcttacatcgataaacgacacaccctgcaa
aagacctaccacaagctccaagacatgaaaatcgacgacgaaatcgttgatgagatgctc
tcctctgcaactaccatggaggagctgcaggatatccaagagtacatgcacttccagtac
ggtcctcagatcaaggatatttctctgtccgatgaagcaaacggcgatgtcgacggtgaa
gtgaatggcaatggcaatggtcaacccacgcaacggcggaaagcaggtgccaacactctc
ttcgaacgaatccgcaaaagcagtgtctatcaccttgttcgtgccttcggcatcactgca
gatgcctttgcgcaagccgcatcacagaatcgtcgtggacagtacgccgaggatcctgaa
cagccgccggaggaaatcgccgacggtgttttggattccgactactccaactcgacaagt
gctcttcgtgctgccaaggccatgtttatcgaagagttggttctcaaccctagaatgcgc
aaggtcatccgcgagcaatgttacagaaacggcgttgtcgactgcttccgcacagaaaaa
ggtctgcgacgaattgatgaacagcatccgtattacgagtttaaatacctgcgtgaccag
caactcacagacattgcacgacgtccagaactgttcttgagcatgttgaaggccgaggaa
gaaggtttggtcaatgtcaaagtgaccttccaaaactttgagcggtaccgccgaagctta
tacagccacattgaatcggacagccagagtgatgtggctgatgcctggaaccgagagcga
cgcgatgtccttgacgctgcccttggcaggctactgaaattgttgactcgcagcgtgaaa
gaaaacattcgacagaactgcgagaacaacgttgccaaagacctccgcgaagtcttttcg
aacaaacttgaccagtctccgtacaagccaaagggtatggttctcggcaccgtaccccga
gtgctcgccttttccaatggcgatgccccagtcggcggtgaccactttatccactgggta
tgggttgaggaggaaggtcgaccgcaagagcatggaaaactcgcaaaattacagttgggt
gaccccgaacgcggtgttccagacggcttcgatgttgctgcattcgtcgcccttgttcgt
cgtcgcgttccagatgttattgcggtctcgggtaaatcgcctgagacccggaagctctac
aagttactgtctgatattgtcgagcacaaggacctgcgaacggccccctatagcgtgggt
gagggcaaggaagcaaaagagattactgatcggctagaggttgtaatggtgaacgatgaa
actgctcagctatatgctcacagcccgagggctgccaccgattttccagtcaaggccgac
tggcttacgtcttattgctgtggaattgctcgatacttgcagaatccactgaaagaatat
gccgcactcggaaaagatttagtttctattcagtttatccccggtcaacgatatcttgcc
gaagaggctgtcatgaagcaactggagagtgcactcgttgacatggtcaacctctgcggt
gttgacatcaacgacgccgtgagtgacacgggagcacagaacctcttgcaatatgtatgc
ggtctcggtcctcgaaaggcgtcacatctggtaaagattgtcaatatgaatggtggcact
gtcaacaaccgtgtcgagttgctcggtgtcgaagcacagtacccagccatgggagtcaaa
gtgtggaataactgcgccagctttctttatctcgattgggagaatgtcgaaaccgatgct
gacccgttggacaacactcgagtgcaccctgaagactacgatatcgcccgtaagatggct
gctgatgcgctggagctcgacgaagaggatatcaaagcagaaacggacgaatccggtccc
ggcgcgattgttcgcaagcttctcaaagacgacctccaggaccgtgtcaacgatttgatt
cttgaagaatatgccgaacagctcgagaagaatctgaaccaacgcaaacgagctacactg
gaaacaattcgagccgaattacagcaaccgtatgaggagctgcgaaagcaatttgtcttc
ccgagcacggatgagattttcactatgctcacaggagaaaccaacgaaacgctggccgac
ggcatgattgtgtcgatgtctatcaaacgaattgcaccagacaacatccagggcaagctt
gactgcggtgtagaagtgttggtgcccgagtcggacatcacagaccggcatgatatcccg
cccaaggctcttttccaaatccaccagtctgtgcagggaaagattctctacttgaacaag
aagacttttacctgcaatatgagcctcctggaagagaaagtaagccgaggctaccagcga
cccattgagcggccccgtggtgaatgggacgaccggcaggagcaagaggacagagacttg
ctgcaggaaaagaccaagaccgagagccgttttgtgcgagtgatcaaacatcctctgttc
agagcgtacagctccaagcaagcagaagaatacctgggaggacagaaccgtggcgactgc
gtgatcaggccgtcttccaaggggcctgaccatcttacagtcacatggaaggtgtcggat
ggtgtgtaccagcatattgatgtgctggagctggacaaggagaacgagtattccgtcggc
cggattttgaagattggcgggaaatacacgtacagcgatctggacgagttgattgtcagc
cacgtgcagaccatggcgaggaaggtagatgagatgatggcgcatgaaaagtaccaaaac
ggcactcgcgccgacaccgaaaaatggctcacaacctacaccatggccaaccctaagcgc
tccgtctacgccttttgcatcaaccccaaatacccaggctatttcttcctctgtttcaaa
gccggccaaaacgccgaactgcagagctggaatgtcaaagtcatcccacagggttatgag
cttcagcgcaacccgtacccggatatgcgcgcgctgtgtaatggtttcaagctgctgttt
acgaatatgcaggttggccgggttggacagggtataccgcggaggtga
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integrated database retrieval system
