Talaromyces rugulosus: TRUGW13939_11794
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Entry
TRUGW13939_11794 CDS
T06879
Name
(RefSeq) uncharacterized protein
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
trg
Talaromyces rugulosus
Pathway
trg04111
Cell cycle - yeast
trg04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
trg00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
TRUGW13939_11794
04113 Meiosis - yeast
TRUGW13939_11794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trg03036
]
TRUGW13939_11794
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
trg00535
]
TRUGW13939_11794
Chromosome and associated proteins [BR:
trg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
TRUGW13939_11794
Meiosis-specific proteins
Cohesin complex and associated proteins
TRUGW13939_11794
Proteoglycans [BR:
trg00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
TRUGW13939_11794
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
OVT1
RPW8
AAA_29
PEARLI-4
APG6_N
FlaC_arch
DUF7310
FtsK_SpoIIIE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
55999271
NCBI-ProteinID:
XP_035350792
UniProt:
A0A7H8RDS3
LinkDB
All DBs
Position
VI:complement(join(4308734..4309026,4309085..4310982,4311035..4312245,4312304..4312463,4312524..4312561))
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AA seq
1199 aa
AA seq
DB search
MYIKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVLSDAYTQMGREE
RQALLHEGSGSAVMSAYVEVIFDNSDERFPTGKPELILRRTIGLKKDEYTLDHRNATKAD
VMNLLESAGFSRSNPYYIVPQGRVTTLTNMKDSERLVLLKEVAGTQVYEARRAESLKIMN
ETNNKRTKIDELLDYINERLDELEEEKDELRNYQEQDRERRCLEYTIYSREQQEIANALD
SLEGQRQTGVEDTDANRENFIQGEKTLTQIDAEIAECKQQIEFLKVDKAQLEDERRETSR
ALAQVELQEKALKDGQSAAQQFKARHDNDLESVQTAIKQRETELQTLLPQFNAAKEQEDG
VKSQLDQAETVRQRLYAKQGRNSRFKNKSERDKWIHNEIQETKNSIKAVKKVESQTKQDI
KDLENTIETLEPEIENLRKQIDSRGDTIQSIEQEVQNGKDERDQLMDQRKELWREEARLD
SVLSNASHEVDRAERNLSHMMDNSTSRGIAAVRRIKRQHNLEGVYGTLAELLDVNERYRT
AVEVTAGTSLFHYVVDTDETATKVLEILQKEKAGRVTFMPLNRLKSRPMNLPKASDTIPM
IEKLEYDPKFEGAFQQVFGKAIICPNLQVAAQYARSHGVNAITPDGDRSDKRGALTGGFH
DSRQSRLEAVKTLTKWRDEHETKKNRATEIRKDLEKLDQEVTQAVGELQKLEQRKQQFHS
SSGPMRQELRSKRELLQNKNDNLDSKQRALQNIASNLTALDGQVGALEAEVSSAFQKALT
PEEEAQLESLGSTAQKLRRQYAELSGQRSEFEARKSVLEVELRENLYPRLDQLSGNGIDI
GDEGAQGNLKTAEREMKKFQTALGKISQRLADVDKSITEGNSQVGKLESRKAEIRNELEA
LAKSIEKHQRRMEKSMQKKAALTKQAAECSSNIRDLGVLPDEAFTKYNKTDSNSVVKKLH
KVNESLKKYSHVNKKAFEQYNNFTKQRETLTKRREELDASQKSIDELITVLDQRKDEAIE
RTFKQVSREFHNVFEKLVPAGRGRLIIQRKTDRALRPEDEIESEDEDRRESVENYVGVGI
SVSFNSKHDDQQRIQQLSGGQKSLCALALVFAIQACDPAPFYLFDEIDANLDAQYRTAVA
QMLQSISEATNGQFICTTFRPEMLHVAEKCYGVSFRNKASTIDVVSKEEALKFVEEQKS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaaacagatcatcatccagggctttaagagttacaaagaccagacggtcatc
gaacccttttccccgaaacacaatgttattgtcggccgcaatggttccggcaagagtaac
tttttcgccgctattcgcttcgttttgagcgatgcctacacgcagatgggacgggaagag
cgccaagctctgcttcacgaaggctccggttccgcagtcatgtcggcctatgtcgaggtg
attttcgacaactcggacgagcgatttcctaccggcaagccagaactaattctccggaga
acgattggtttgaaaaaggacgaatataccctggaccacaggaacgcgaccaaggcagat
gtcatgaacctgctggaatctgccggtttctcgcgatctaacccatactatatcgtccct
caaggtcgtgtcacaacattaacaaatatgaaagattcggaacgtttggtgctgctaaag
gaagtcgctggtactcaggtctacgaagcccgtcgagccgagtcactcaaaatcatgaac
gagaccaataacaaacgaacgaaaattgacgaattacttgactatattaacgaacgtctc
gatgaactggaggaagaaaaagacgagctacggaactatcaggaacaggatcgtgagcgt
cggtgcttggaatacacaatctattctcgcgaacagcaggagattgcaaatgcgcttgat
agcctcgagggccaacgtcaaaccggtgtcgaggacaccgatgcaaaccgggaaaacttt
attcagggtgaaaaaaccttgacccaaattgatgcagaaatcgccgagtgcaagcagcag
attgaatttttgaaagtggacaaggcgcagctggaggatgaacgccgcgagacttctcgc
gcccttgctcaggtcgaactacaggagaaggctctcaaagatggccaatctgctgcccag
cagttcaaagctcgacatgataacgaccttgaatctgtccagaccgccattaagcaacgt
gaaacagagctacagacgctattgcctcaatttaacgctgctaaagagcaagaggacggc
gtcaagtcgcaattagatcaagcggaaactgttcgacaacgcctctatgctaaacaaggc
cgaaattctcgcttcaaaaacaagtccgaacgtgacaagtggatccacaacgagattcag
gagaccaagaactctattaaggctgttaagaaagttgaatctcaaaccaaacaagatatt
aaggacctcgagaatactattgagaccttggaaccggagattgagaatttacgcaagcag
attgatagtagaggagatactattcagtccatcgaacaagaggtgcaaaacggcaaggat
gaaagggatcagctcatggaccaacgaaaggaactatggcgagaagaggcccgcttggat
tccgtgctgtcgaatgcttcccacgaagttgatcgtgccgagcgtaatctctcgcacatg
atggacaacagtaccagtcgcggcatcgcagctgtccgaagaatcaagcgccagcacaat
ctagaaggcgtttatggcacactagccgagctcctagatgtcaacgagcgatatcgcacc
gcagtcgaagttactgctggcacaagcctgtttcattatgtcgtcgatacggacgagact
gccaccaaagtccttgaaattttgcaaaaagagaaggctggtcgagttacattcatgcca
ctgaatcgcttgaagtctcgtccaatgaacctgcccaaggcaagcgacacgattcccatg
attgaaaaactagagtacgatcccaaatttgagggcgcatttcaacaagtgtttggcaaa
gcaattatttgtccaaatcttcaagtggctgcccagtacgctcgaagtcacggcgtgaac
gccatcacccctgatggagatcggtcggataagcgtggtgcattgactggaggtttccat
gattcccggcaatctcgccttgaggctgtgaaaaccttgacgaagtggcgggacgaacat
gaaacgaagaagaaccgtgccaccgagattcgcaaagatctagaaaagctagatcaagag
gtcactcaagcggttggcgagttgcaaaaactggagcagcgcaagcaacaattccacagc
agcagcggaccgatgcgacaagagctccgaagcaaacgtgagttgctgcagaacaagaat
gataatcttgatagcaagcaacgagctcttcagaacattgcaagcaacctgactgccctg
gatggccaggtcggtgcattggaagcggaagtgtcttcggcattccaaaaggcactcaca
ccagaggaagaggcacagcttgaatcgcttggatctaccgcccagaaacttcgccgccaa
tatgcagaactctctggccaacgcagtgaatttgaggctcggaagtcggtgttggaagtg
gaacttcgcgaaaacctttacccacgtctcgaccagctcagcggtaatgggattgatata
ggcgatgagggcgcacagggtaatctcaaaaccgctgagcgggagatgaagaaattccag
actgcacttggaaagatatcgcaacgtcttgccgatgttgacaagtcgattacagaaggc
aatagtcaagttggaaagctagaaagtcgcaaggccgagatacgaaacgaacttgaggcg
cttgccaagtcgattgaaaagcaccagagacgaatggaaaagagcatgcagaagaaggca
gcgctgaccaagcaagctgccgagtgtagctcaaacattcgtgatctgggtgtcttgccg
gatgaagcattcaccaagtacaacaagacggactcgaatagtgttgtcaaaaagctgcac
aaagtcaacgagtcactgaaaaagtattctcacgtcaacaagaaggcgtttgagcagtac
aacaactttaccaaacaacgggaaaccttgacaaagcggagagaagagctcgacgcgtcc
caaaagtcaatcgacgagcttataacggtgcttgaccagcgcaaggatgaagctattgag
cgtacattcaagcaggtatcgcgcgagttccacaacgtgtttgagaagcttgtacctgca
ggccgcggccgcctaattattcagcgcaagacagaccgagctcttcgcccggaagacgag
attgagtccgaggacgaagaccgccgagagagtgttgagaattacgttggtgttggaatc
agtgttagtttcaacagcaaacacgacgaccaacaacgtattcaacagctcagtggtggc
caaaagagtttgtgtgcacttgcacttgtctttgccattcaagcctgcgatcctgcaccg
ttttatctctttgacgagatcgatgccaatctagacgcccagtaccgtaccgcagtggct
caaatgctgcagtcaatctcggaggccaccaacggacagtttatctgcacgactttccgg
ccggaaatgctgcacgtggcggagaagtgctacggggtcagcttccgcaacaaggctagt
acaatcgacgtggtgtcgaaagaggaagcactcaagtttgtggaggagcaaaagagttga
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